Add install cmake/make target

* Fix BinDisc quantile mistakes

* Fix FImdlp tests

* Fix tests, samples and remove uneeded support files

* Add coypright header to sources
Fix coverage report
Add coverage badge to README

* Update sonar github action

* Move sources to a folder and change ArffFiles files to library

* Add recursive submodules to github action

.devcontainer/Dockerfile

@@ -1,18 +1,16 @@
 FROM mcr.microsoft.com/devcontainers/cpp:0-ubuntu-22.04
 
-ARG REINSTALL_CMAKE_VERSION_FROM_SOURCE="3.22.2"
-
-# Optionally install the cmake for vcpkg
-COPY ./reinstall-cmake.sh /tmp/
-
-RUN if [ "${REINSTALL_CMAKE_VERSION_FROM_SOURCE}" != "none" ]; then \
-        chmod +x /tmp/reinstall-cmake.sh && /tmp/reinstall-cmake.sh ${REINSTALL_CMAKE_VERSION_FROM_SOURCE}; \
-    fi \
-    && rm -f /tmp/reinstall-cmake.sh
+RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
+    && apt-get -y install --no-install-recommends \
+    python3 \
+    python3-pip \
+    lcov \
+    cmake \
+    && apt-get autoremove -y && apt-get clean -y && rm -rf /var/lib/apt/lists/*
 
+RUN pip3 install --no-cache-dir \
+    cpplint \
+    cmake-format\
+    gcovr
 # [Optional] Uncomment this section to install additional vcpkg ports.
 # RUN su vscode -c "${VCPKG_ROOT}/vcpkg install <your-port-name-here>"
-
-# [Optional] Uncomment this section to install additional packages.
-# RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
-#     && apt-get -y install --no-install-recommends <your-package-list-here>

.github/workflows/build.yml

@@ -13,29 +13,32 @@ jobs:
     env:
       BUILD_WRAPPER_OUT_DIR: build_wrapper_output_directory # Directory where build-wrapper output will be placed
     steps:
-      - uses: actions/checkout@v3.2.0
+      - uses: actions/checkout@v4
         with:
           fetch-depth: 0 # Shallow clones should be disabled for a better relevancy of analysis
+          submodules: recursive
       - name: Install sonar-scanner and build-wrapper
-        uses: SonarSource/sonarcloud-github-c-cpp@v1
+        uses: SonarSource/sonarcloud-github-c-cpp@v2
       - name: Install lcov & gcovr
         run: |
           sudo apt-get -y install lcov
           sudo apt-get -y install gcovr
+      - name: Install Libtorch
+        run: |
+          wget https://download.pytorch.org/libtorch/cpu/libtorch-cxx11-abi-shared-with-deps-2.3.1%2Bcpu.zip
+          unzip libtorch-cxx11-abi-shared-with-deps-2.3.1+cpu.zip
       - name: Tests & build-wrapper
         run: |
-          cmake -S . -B build -Wno-dev 
-          build-wrapper-linux-x86-64 --out-dir ${{ env.BUILD_WRAPPER_OUT_DIR }} cmake --build build/ --config Release
+          cmake -S . -B build -Wno-dev -DCMAKE_PREFIX_PATH=$(pwd)/libtorch -DCMAKE_BUILD_TYPE=Debug -DENABLE_TESTING=ON
+          build-wrapper-linux-x86-64 --out-dir ${{ env.BUILD_WRAPPER_OUT_DIR }} cmake --build build/ --config Debug
+          cmake --build build -j 4
           cd build
-          make
-          ctest -C Release --output-on-failure --test-dir tests
-          cd ..
-          # gcovr -f CPPFImdlp.cpp -f Metrics.cpp --merge-mode-functions=separate --txt --sonarqube=coverage.xml
-          gcovr -f CPPFImdlp.cpp -f Metrics.cpp  --txt --sonarqube=coverage.xml
+          ctest -C Debug --output-on-failure -j 4
+          gcovr -f ../src/CPPFImdlp.cpp -f ../src/Metrics.cpp -f ../src/BinDisc.cpp -f ../src/Discretizer.cpp --txt --sonarqube=coverage.xml
       - name: Run sonar-scanner
         env:
           GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
           SONAR_TOKEN: ${{ secrets.SONAR_TOKEN }}
         run: |
-          sonar-scanner --define sonar.cfamily.build-wrapper-output="${{ env.BUILD_WRAPPER_OUT_DIR }}" \
-                        --define sonar.coverageReportPaths=coverage.xml
+          sonar-scanner --define sonar.cfamily.compile-commands="${{ env.BUILD_WRAPPER_OUT_DIR }}" \
+                        --define sonar.coverageReportPaths=build/coverage.xml

.gitignore

@@ -31,6 +31,10 @@
 *.out
 *.app
 **/build
+build_Debug
+build_Release
+build_debug
+build_release
 **/lcoverage
 .idea
 cmake-*

.gitmodules

@@ -0,0 +1,3 @@
+[submodule "tests/lib/Files"]
+	path = tests/lib/Files
+	url = https://github.com/rmontanana/ArffFiles.git

.vscode/launch.json

@@ -8,15 +8,10 @@
             "name": "C++ Launch config",
             "type": "cppdbg",
             "request": "launch",
-            "program": "${workspaceFolder}/build/sample/sample",
-            "cwd": "${workspaceFolder}/build/sample",
-            "args": [
-                "-f",
-                "glass"
-            ],
-            "targetArchitecture": "arm64",
+            "program": "${workspaceFolder}/tests/build/BinDisc_unittest",
+            "cwd": "${workspaceFolder}/tests/build",
+            "args": [],
             "launchCompleteCommand": "exec-run",
-            "preLaunchTask": "CMake: build",
             "stopAtEntry": false,
             "linux": {
                 "MIMode": "gdb",

.vscode/settings.json

@@ -5,5 +5,105 @@
     },
     "C_Cpp.default.configurationProvider": "ms-vscode.cmake-tools",
     "cmake.configureOnOpen": true,
-    "sonarlint.pathToCompileCommands": "${workspaceFolder}/build/compile_commands.json"
+    "sonarlint.pathToCompileCommands": "${workspaceFolder}/build/compile_commands.json",
+    "files.associations": {
+        "*.rmd": "markdown",
+        "*.py": "python",
+        "vector": "cpp",
+        "__bit_reference": "cpp",
+        "__bits": "cpp",
+        "__config": "cpp",
+        "__debug": "cpp",
+        "__errc": "cpp",
+        "__hash_table": "cpp",
+        "__locale": "cpp",
+        "__mutex_base": "cpp",
+        "__node_handle": "cpp",
+        "__nullptr": "cpp",
+        "__split_buffer": "cpp",
+        "__string": "cpp",
+        "__threading_support": "cpp",
+        "__tuple": "cpp",
+        "array": "cpp",
+        "atomic": "cpp",
+        "bitset": "cpp",
+        "cctype": "cpp",
+        "chrono": "cpp",
+        "clocale": "cpp",
+        "cmath": "cpp",
+        "compare": "cpp",
+        "complex": "cpp",
+        "concepts": "cpp",
+        "cstdarg": "cpp",
+        "cstddef": "cpp",
+        "cstdint": "cpp",
+        "cstdio": "cpp",
+        "cstdlib": "cpp",
+        "cstring": "cpp",
+        "ctime": "cpp",
+        "cwchar": "cpp",
+        "cwctype": "cpp",
+        "exception": "cpp",
+        "initializer_list": "cpp",
+        "ios": "cpp",
+        "iosfwd": "cpp",
+        "istream": "cpp",
+        "limits": "cpp",
+        "locale": "cpp",
+        "memory": "cpp",
+        "mutex": "cpp",
+        "new": "cpp",
+        "optional": "cpp",
+        "ostream": "cpp",
+        "ratio": "cpp",
+        "sstream": "cpp",
+        "stdexcept": "cpp",
+        "streambuf": "cpp",
+        "string": "cpp",
+        "string_view": "cpp",
+        "system_error": "cpp",
+        "tuple": "cpp",
+        "type_traits": "cpp",
+        "typeinfo": "cpp",
+        "unordered_map": "cpp",
+        "variant": "cpp",
+        "algorithm": "cpp",
+        "iostream": "cpp",
+        "iomanip": "cpp",
+        "numeric": "cpp",
+        "set": "cpp",
+        "__tree": "cpp",
+        "deque": "cpp",
+        "list": "cpp",
+        "map": "cpp",
+        "unordered_set": "cpp",
+        "any": "cpp",
+        "condition_variable": "cpp",
+        "forward_list": "cpp",
+        "fstream": "cpp",
+        "stack": "cpp",
+        "thread": "cpp",
+        "__memory": "cpp",
+        "filesystem": "cpp",
+        "*.toml": "toml",
+        "utility": "cpp",
+        "span": "cpp",
+        "*.tcc": "cpp",
+        "bit": "cpp",
+        "charconv": "cpp",
+        "cinttypes": "cpp",
+        "codecvt": "cpp",
+        "functional": "cpp",
+        "iterator": "cpp",
+        "memory_resource": "cpp",
+        "random": "cpp",
+        "source_location": "cpp",
+        "format": "cpp",
+        "numbers": "cpp",
+        "semaphore": "cpp",
+        "stop_token": "cpp",
+        "text_encoding": "cpp",
+        "typeindex": "cpp",
+        "valarray": "cpp"
+    }
 }

CMakeLists.txt

@@ -1,13 +1,44 @@
 cmake_minimum_required(VERSION 3.20)
-project(mdlp)
 
-if (POLICY CMP0135)
-    cmake_policy(SET CMP0135 NEW)
-endif ()
+project(fimdlp)
+set(CMAKE_CXX_STANDARD 17)
+cmake_policy(SET CMP0135 NEW)
 
-set(CMAKE_CXX_STANDARD 11)
+find_package(Torch CONFIG REQUIRED)
 
-add_library(mdlp CPPFImdlp.cpp Metrics.cpp sample/sample.cpp)
-add_subdirectory(sample)
-add_subdirectory(tests)
+set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG}  -fno-elide-constructors")
+set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} -O3")
+if (NOT ${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
+    set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -fno-default-inline")
+endif()
 
+if (ENABLE_TESTING)
+    MESSAGE("Debug mode")
+    enable_testing()
+    set(CODE_COVERAGE ON)
+    SET(GCC_COVERAGE_LINK_FLAGS " ${GCC_COVERAGE_LINK_FLAGS} -lgcov --coverage")
+    add_subdirectory(tests)
+else(ENABLE_TESTING)
+    MESSAGE("Release mode")
+endif(ENABLE_TESTING)
+
+if (ENABLE_SAMPLE)
+    message("Building sample")
+    add_subdirectory(sample)
+endif(ENABLE_SAMPLE)
+
+include_directories(
+    ${TORCH_INCLUDE_DIRS}
+    ${fimdlp_SOURCE_DIR}/src
+)
+
+add_library(fimdlp src/CPPFImdlp.cpp src/Metrics.cpp src/BinDisc.cpp src/Discretizer.cpp)
+target_link_libraries(fimdlp "${TORCH_LIBRARIES}")
+
+# Installation
+# ------------
+install(TARGETS fimdlp
+        ARCHIVE DESTINATION lib
+        LIBRARY DESTINATION lib
+        CONFIGURATIONS Release)
+install(DIRECTORY src/ DESTINATION include/fimdlp FILES_MATCHING CONFIGURATIONS Release PATTERN "*.h")

Makefile

@@ -0,0 +1,35 @@
+SHELL := /bin/bash
+.DEFAULT_GOAL := build
+.PHONY: build test
+lcov := lcov
+
+build: 
+	@if [ -d build_release ]; then rm -fr build_release; fi
+	@mkdir build_release
+	@cmake -B build_release -S . -DCMAKE_BUILD_TYPE=Release -DENABLE_TESTING=OFF -DENABLE_SAMPLE=ON
+	@cmake --build build_release -j 8
+
+install:
+	@cmake --build build_release --target install -j 8		
+
+test:
+	@if [ -d build_debug ]; then rm -fr build_debug; fi
+	@mkdir build_debug
+	@cmake -B build_debug -S . -DCMAKE_BUILD_TYPE=Debug -DENABLE_TESTING=ON -DENABLE_SAMPLE=ON
+	@cmake --build build_debug -j 8
+	@cd build_debug/tests && ctest --output-on-failure -j 8
+	@cd build_debug/tests && $(lcov) --capture --directory ../ --demangle-cpp --ignore-errors source,source --ignore-errors mismatch --output-file coverage.info >/dev/null 2>&1; \
+	$(lcov) --remove coverage.info '/usr/*' --output-file coverage.info >/dev/null 2>&1; \
+	$(lcov) --remove coverage.info 'lib/*' --output-file coverage.info >/dev/null 2>&1; \
+	$(lcov) --remove coverage.info 'libtorch/*' --output-file coverage.info >/dev/null 2>&1; \
+	$(lcov) --remove coverage.info 'tests/*' --output-file coverage.info >/dev/null 2>&1; \
+	$(lcov) --remove coverage.info 'gtest/*' --output-file coverage.info >/dev/null 2>&1;
+	@genhtml build_debug/tests/coverage.info --demangle-cpp --output-directory build_debug/tests/coverage --title "Discretizer mdlp Coverage Report" -s -k -f --legend
+	@echo "* Coverage report is generated at build_debug/tests/coverage/index.html"
+	@which python || (echo ">>> Please install python"; exit 1)
+	@if [ ! -f build_debug/tests/coverage.info ]; then \
+		echo ">>> No coverage.info file found!"; \
+		exit 1; \
+	fi
+	@echo ">>> Updating coverage badge..."
+	@env python update_coverage.py build_debug/tests

README.md

@@ -1,8 +1,9 @@
 [![Build](https://github.com/rmontanana/mdlp/actions/workflows/build.yml/badge.svg)](https://github.com/rmontanana/mdlp/actions/workflows/build.yml)
 [![Quality Gate Status](https://sonarcloud.io/api/project_badges/measure?project=rmontanana_mdlp&metric=alert_status)](https://sonarcloud.io/summary/new_code?id=rmontanana_mdlp)
 [![Reliability Rating](https://sonarcloud.io/api/project_badges/measure?project=rmontanana_mdlp&metric=reliability_rating)](https://sonarcloud.io/summary/new_code?id=rmontanana_mdlp)
+[![Coverage Badge](https://img.shields.io/badge/Coverage-100,0%25-green)](html/index.html)
 
-# mdlp
+# <img src="logo.png" alt="logo" width="50"/> mdlp
 
 Discretization algorithm based on the paper by Fayyad &amp; Irani [Multi-Interval Discretization of Continuous-Valued Attributes for Classification Learning](https://www.ijcai.org/Proceedings/93-2/Papers/022.pdf)
 
@@ -14,28 +15,32 @@ The implementation tries to mitigate the problem of different label values with
 Other features:
 
 - Intervals with the same value of the variable are not taken into account for cutpoints.
-- Intervals have to have more than two examples to be evaluated.
+- Intervals have to have more than two examples to be evaluated (mdlp).
 
-The algorithm returns the cut points for the variable.
+- The algorithm returns the cut points for the variable.
+
+- The transform method uses the cut points returning its index in the following way:
+
+        cut[i - 1] <= x < cut[i]
+
+    using the [std::upper_bound](https://en.cppreference.com/w/cpp/algorithm/upper_bound) method
+
+- K-Bins discretization is also implemented, and "quantile" and "uniform" strategies are available.
 
 ## Sample
 
 To run the sample, just execute the following commands:
 
 ```bash
-cd sample
-cmake -B build
-cd build
-make
-./sample -f iris -m 2
-./sample -h
+make build
+build_release/sample/sample -f iris -m 2
+build_release/sample/sample -h
 ```
 
 ## Test
 
-To run the tests and see coverage (llvm & gcovr have to be installed), execute the following commands:
+To run the tests and see coverage (llvm with lcov and genhtml have to be installed), execute the following commands:
 
 ```bash
-cd tests
-./test
+make test
 ```

sample/.vscode/launch.json

@@ -1,21 +0,0 @@
-{
-    "version": "0.2.0",
-    "configurations": [
-        {
-            "name": "lldb puro",
-            "type": "cppdbg",
-            // "targetArchitecture": "arm64",
-            "request": "launch",
-            "program": "${workspaceRoot}/build/sample",
-            "args": [
-                "-f",
-                "iris"
-            ],
-            "stopAtEntry": false,
-            "cwd": "${workspaceRoot}/build/",
-            "environment": [],
-            "externalConsole": false,
-            "MIMode": "lldb"
-        },
-    ]
-}

sample/CMakeLists.txt

@@ -1,5 +1,11 @@
-set(CMAKE_CXX_STANDARD 11)
+set(CMAKE_CXX_STANDARD 17)
 
 set(CMAKE_BUILD_TYPE Debug)
 
-add_executable(sample sample.cpp ../tests/ArffFiles.cpp ../Metrics.cpp ../CPPFImdlp.cpp)
+include_directories(
+    ${fimdlp_SOURCE_DIR}/src
+    ${fimdlp_SOURCE_DIR}/tests/lib/Files
+)
+
+add_executable(sample sample.cpp )
+target_link_libraries(sample fimdlp "${TORCH_LIBRARIES}")

sample/sample.cpp

@@ -1,3 +1,9 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #include <iostream>
 #include <vector>
 #include <iomanip>
@@ -5,13 +11,13 @@
 #include <algorithm>
 #include <cstring>
 #include <getopt.h>
-#include "../CPPFImdlp.h"
-#include "../tests/ArffFiles.h"
+#include <torch/torch.h>
+#include <ArffFiles.hpp>
+#include "Discretizer.h"
+#include "CPPFImdlp.h"
+#include "BinDisc.h"
 
-using namespace std;
-using namespace mdlp;
-
-const string PATH = "../../tests/datasets/";
+const string PATH = "tests/datasets/";
 
 /* print a description of all supported options */
 void usage(const char* path)
@@ -20,17 +26,17 @@ void usage(const char* path)
     const char* basename = strrchr(path, '/');
     basename = basename ? basename + 1 : path;
 
-    cout << "usage: " << basename << "[OPTION]" << endl;
-    cout << "  -h, --help\t\t Print this help and exit." << endl;
-    cout
+    std::cout << "usage: " << basename << "[OPTION]" << std::endl;
+    std::cout << "  -h, --help\t\t Print this help and exit." << std::endl;
+    std::cout
         << "  -f, --file[=FILENAME]\t {all, diabetes, glass, iris, kdd_JapaneseVowels, letter, liver-disorders, mfeat-factors, test}."
-        << endl;
-    cout << "  -p, --path[=FILENAME]\t folder where the arff dataset is located, default " << PATH << endl;
-    cout << "  -m, --max_depth=INT\t max_depth pased to discretizer. Default = MAX_INT" << endl;
-    cout
+        << std::endl;
+    std::cout << "  -p, --path[=FILENAME]\t folder where the arff dataset is located, default " << PATH << std::endl;
+    std::cout << "  -m, --max_depth=INT\t max_depth pased to discretizer. Default = MAX_INT" << std::endl;
+    std::cout
         << "  -c, --max_cutpoints=FLOAT\t percentage of lines expressed in decimal or integer number or cut points. Default = 0 -> any"
-        << endl;
-    cout << "  -n, --min_length=INT\t interval min_length pased to discretizer. Default = 3" << endl;
+        << std::endl;
+    std::cout << "  -n, --min_length=INT\t interval min_length pased to discretizer. Default = 3" << std::endl;
 }
 
 tuple<string, string, int, int, float> parse_arguments(int argc, char** argv)
@@ -96,56 +102,79 @@ void process_file(const string& path, const string& file_name, bool class_last,
     file.load(path + file_name + ".arff", class_last);
     const auto attributes = file.getAttributes();
     const auto items = file.getSize();
-    cout << "Number of lines: " << items << endl;
-    cout << "Attributes: " << endl;
+    std::cout << "Number of lines: " << items << std::endl;
+    std::cout << "Attributes: " << std::endl;
     for (auto attribute : attributes) {
-        cout << "Name: " << get<0>(attribute) << " Type: " << get<1>(attribute) << endl;
+        std::cout << "Name: " << get<0>(attribute) << " Type: " << get<1>(attribute) << std::endl;
     }
-    cout << "Class name: " << file.getClassName() << endl;
-    cout << "Class type: " << file.getClassType() << endl;
-    cout << "Data: " << endl;
-    vector<samples_t>& X = file.getX();
-    labels_t& y = file.getY();
+    std::cout << "Class name: " << file.getClassName() << std::endl;
+    std::cout << "Class type: " << file.getClassType() << std::endl;
+    std::cout << "Data: " << std::endl;
+    std::vector<mdlp::samples_t>& X = file.getX();
+    mdlp::labels_t& y = file.getY();
     for (int i = 0; i < 5; i++) {
         for (auto feature : X) {
-            cout << fixed << setprecision(1) << feature[i] << " ";
+            std::cout << fixed << setprecision(1) << feature[i] << " ";
         }
-        cout << y[i] << endl;
+        std::cout << y[i] << std::endl;
     }
     auto test = mdlp::CPPFImdlp(min_length, max_depth, max_cutpoints);
     size_t total = 0;
     for (auto i = 0; i < attributes.size(); i++) {
         auto min_max = minmax_element(X[i].begin(), X[i].end());
-        cout << "Cut points for feature " << get<0>(attributes[i]) << ": [" << setprecision(3);
+        std::cout << "Cut points for feature " << get<0>(attributes[i]) << ": [" << setprecision(3);
         test.fit(X[i], y);
         auto cut_points = test.getCutPoints();
         for (auto item : cut_points) {
-            cout << item;
+            std::cout << item;
             if (item != cut_points.back())
-                cout << ", ";
+                std::cout << ", ";
         }
         total += test.getCutPoints().size();
-        cout << "]" << endl;
-        cout << "Min: " << *min_max.first << " Max: " << *min_max.second << endl;
-        cout << "--------------------------" << endl;
+        std::cout << "]" << std::endl;
+        std::cout << "Min: " << *min_max.first << " Max: " << *min_max.second << std::endl;
+        std::cout << "--------------------------" << std::endl;
+    }
+    std::cout << "Total cut points ...: " << total << std::endl;
+    std::cout << "Total feature states: " << total + attributes.size() << std::endl;
+    std::cout << "Version ............: " << test.version() << std::endl;
+    std::cout << "Transformed data (vector)..: " << std::endl;
+    test.fit(X[0], y);
+    auto data = test.transform(X[0]);
+    for (int i = 130; i < 135; i++) {
+        std::cout << std::fixed << std::setprecision(1) << X[0][i] << " " << data[i] << std::endl;
+    }
+    auto Xt = torch::tensor(X[0], torch::kFloat32);
+    auto yt = torch::tensor(y, torch::kInt32);
+    //test.fit_t(Xt, yt);
+    auto result = test.fit_transform_t(Xt, yt);
+    std::cout << "Transformed data (torch)...: " << std::endl;
+    for (int i = 130; i < 135; i++) {
+        std::cout << std::fixed << std::setprecision(1) << Xt[i].item<mdlp::precision_t>() << " " << result[i].item<int>() << std::endl;
+    }
+    auto disc = mdlp::BinDisc(3);
+    auto res_v = disc.fit_transform(X[0], y);
+    disc.fit_t(Xt, yt);
+    auto res_t = disc.transform_t(Xt);
+    std::cout << "Transformed data (BinDisc)...: " << std::endl;
+    for (int i = 130; i < 135; i++) {
+        std::cout << std::fixed << std::setprecision(1) << Xt[i].item<mdlp::precision_t>() << " " << res_v[i] << " " << res_t[i].item<int>() << std::endl;
     }
-    cout << "Total cut points ...: " << total << endl;
-    cout << "Total feature states: " << total + attributes.size() << endl;
 }
 
 void process_all_files(const map<string, bool>& datasets, const string& path, int max_depth, int min_length,
     float max_cutpoints)
 {
-    cout << "Results: " << "Max_depth: " << max_depth << "  Min_length: " << min_length << "  Max_cutpoints: "
-        << max_cutpoints << endl << endl;
+    std::cout << "Results: " << "Max_depth: " << max_depth << "  Min_length: " << min_length << "  Max_cutpoints: "
+        << max_cutpoints << std::endl << std::endl;
     printf("%-20s %4s %4s\n", "Dataset", "Feat", "Cuts Time(ms)");
     printf("==================== ==== ==== ========\n");
     for (const auto& dataset : datasets) {
         ArffFiles file;
         file.load(path + dataset.first + ".arff", dataset.second);
         auto attributes = file.getAttributes();
-        vector<samples_t>& X = file.getX();
-        labels_t& y = file.getY();
+        std::vector<mdlp::samples_t>& X = file.getX();
+        mdlp::labels_t& y = file.getY();
         size_t timing = 0;
         size_t cut_points = 0;
         for (auto i = 0; i < attributes.size(); i++) {
@@ -163,7 +192,7 @@ void process_all_files(const map<string, bool>& datasets, const string& path, in
 
 int main(int argc, char** argv)
 {
-    map<string, bool> datasets = {
+    std::map<std::string, bool> datasets = {
             {"diabetes",           true},
             {"glass",              true},
             {"iris",               true},
@@ -173,14 +202,14 @@ int main(int argc, char** argv)
             {"mfeat-factors",      true},
             {"test",               true}
     };
-    string file_name;
-    string path;
+    std::string file_name;
+    std::string path;
     int max_depth;
     int min_length;
     float max_cutpoints;
     tie(file_name, path, max_depth, min_length, max_cutpoints) = parse_arguments(argc, argv);
     if (datasets.find(file_name) == datasets.end() && file_name != "all") {
-        cout << "Invalid file name: " << file_name << endl;
+        std::cout << "Invalid file name: " << file_name << std::endl;
         usage(argv[0]);
         exit(1);
     }
@@ -188,10 +217,10 @@ int main(int argc, char** argv)
         process_all_files(datasets, path, max_depth, min_length, max_cutpoints);
     else {
         process_file(path, file_name, datasets[file_name], max_depth, min_length, max_cutpoints);
-        cout << "File name ....: " << file_name << endl;
-        cout << "Max depth ....: " << max_depth << endl;
-        cout << "Min length ...: " << min_length << endl;
-        cout << "Max cutpoints : " << max_cutpoints << endl;
+        std::cout << "File name ....: " << file_name << std::endl;
+        std::cout << "Max depth ....: " << max_depth << std::endl;
+        std::cout << "Min length ...: " << min_length << std::endl;
+        std::cout << "Max cutpoints : " << max_cutpoints << std::endl;
     }
     return 0;
 }

sonar-project.properties

@@ -3,7 +3,7 @@ sonar.organization=rmontanana
 
 # This is the name and version displayed in the SonarCloud UI.
 sonar.projectName=mdlp
-sonar.projectVersion=1.0.2
+sonar.projectVersion=2.0.1
 # sonar.test.exclusions=tests/**
 # sonar.tests=tests/
 # sonar.coverage.exclusions=tests/**,sample/**

src/BinDisc.cpp

@@ -0,0 +1,98 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#include <algorithm>
+#include <cmath>
+#include "BinDisc.h"
+#include <iostream>
+#include <string>
+
+namespace mdlp {
+
+    BinDisc::BinDisc(int n_bins, strategy_t strategy) :
+        Discretizer(), n_bins{ n_bins }, strategy{ strategy }
+    {
+        if (n_bins < 3) {
+            throw std::invalid_argument("n_bins must be greater than 2");
+        }
+    }
+    BinDisc::~BinDisc() = default;
+    void BinDisc::fit(samples_t& X)
+    {
+        // y is included for compatibility with the Discretizer interface
+        cutPoints.clear();
+        if (X.empty()) {
+            cutPoints.push_back(0.0);
+            cutPoints.push_back(0.0);
+            return;
+        }
+        if (strategy == strategy_t::QUANTILE) {
+            direction = bound_dir_t::RIGHT;
+            fit_quantile(X);
+        } else if (strategy == strategy_t::UNIFORM) {
+            direction = bound_dir_t::RIGHT;
+            fit_uniform(X);
+        }
+    }
+    void BinDisc::fit(samples_t& X, labels_t& y)
+    {
+        fit(X);
+    }
+    std::vector<precision_t> linspace(precision_t start, precision_t end, int num)
+    {
+        if (start == end) {
+            return { start, end };
+        }
+        precision_t delta = (end - start) / static_cast<precision_t>(num - 1);
+        std::vector<precision_t> linspc;
+        for (size_t i = 0; i < num; ++i) {
+            precision_t val = start + delta * static_cast<precision_t>(i);
+            linspc.push_back(val);
+        }
+        return linspc;
+    }
+    size_t clip(const size_t n, const size_t lower, const size_t upper)
+    {
+        return std::max(lower, std::min(n, upper));
+    }
+    std::vector<precision_t> percentile(samples_t& data, const std::vector<precision_t>& percentiles)
+    {
+        // Implementation taken from https://dpilger26.github.io/NumCpp/doxygen/html/percentile_8hpp_source.html
+        std::vector<precision_t> results;
+        bool first = true;
+        results.reserve(percentiles.size());
+        for (auto percentile : percentiles) {
+            const auto i = static_cast<size_t>(std::floor(static_cast<precision_t>(data.size() - 1) * percentile / 100.));
+            const auto indexLower = clip(i, 0, data.size() - 2);
+            const precision_t percentI = static_cast<precision_t>(indexLower) / static_cast<precision_t>(data.size() - 1);
+            const precision_t fraction =
+                (percentile / 100.0 - percentI) /
+                (static_cast<precision_t>(indexLower + 1) / static_cast<precision_t>(data.size() - 1) - percentI);
+            if (const auto value = data[indexLower] + (data[indexLower + 1] - data[indexLower]) * fraction; value != results.back() || first) // first needed as results.back() return is undefined for empty vectors
+                results.push_back(value);
+            first = false;
+        }
+        return results;
+    }
+    void BinDisc::fit_quantile(const samples_t& X)
+    {
+        auto quantiles = linspace(0.0, 100.0, n_bins + 1);
+        auto data = X;
+        std::sort(data.begin(), data.end());
+        if (data.front() == data.back() || data.size() == 1) {
+            // if X is constant, pass any two given points that shall be ignored in transform
+            cutPoints.push_back(data.front());
+            cutPoints.push_back(data.front());
+            return;
+        }
+        cutPoints = percentile(data, quantiles);
+    }
+    void BinDisc::fit_uniform(const samples_t& X)
+    {
+        auto [vmin, vmax] = std::minmax_element(X.begin(), X.end());
+        cutPoints = linspace(*vmin, *vmax, n_bins + 1);
+    }
+}

src/BinDisc.h

@@ -0,0 +1,33 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#ifndef BINDISC_H
+#define BINDISC_H
+
+#include "typesFImdlp.h"
+#include "Discretizer.h"
+#include <string>
+
+namespace mdlp {
+    enum class strategy_t {
+        UNIFORM,
+        QUANTILE
+    };
+    class BinDisc : public Discretizer {
+    public:
+        BinDisc(int n_bins = 3, strategy_t strategy = strategy_t::UNIFORM);
+        ~BinDisc();
+        // y is included for compatibility with the Discretizer interface
+        void fit(samples_t& X_, labels_t& y) override;
+        void fit(samples_t& X);
+    private:
+        void fit_uniform(const samples_t&);
+        void fit_quantile(const samples_t&);
+        int n_bins;
+        strategy_t strategy;
+    };
+}
+#endif

src/CPPFImdlp.cpp

@@ -1,34 +1,38 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #include <numeric>
 #include <algorithm>
 #include <set>
 #include <cmath>
 #include "CPPFImdlp.h"
-#include "Metrics.h"
 
 namespace mdlp {
 
-    CPPFImdlp::CPPFImdlp(size_t min_length_, int max_depth_, float proposed): min_length(min_length_),
+    CPPFImdlp::CPPFImdlp(size_t min_length_, int max_depth_, float proposed) :
+        Discretizer(),
+        min_length(min_length_),
         max_depth(max_depth_),
         proposed_cuts(proposed)
     {
+        direction = bound_dir_t::RIGHT;
     }
 
-    CPPFImdlp::CPPFImdlp() = default;
-
-    CPPFImdlp::~CPPFImdlp() = default;
-
     size_t CPPFImdlp::compute_max_num_cut_points() const
     {
         // Set the actual maximum number of cut points as a number or as a percentage of the number of samples
         if (proposed_cuts == 0) {
             return numeric_limits<size_t>::max();
         }
-        if (proposed_cuts < 0 || proposed_cuts > static_cast<float>(X.size())) {
+        if (proposed_cuts < 0 || proposed_cuts > static_cast<precision_t>(X.size())) {
             throw invalid_argument("wrong proposed num_cuts value");
         }
         if (proposed_cuts < 1)
-            return static_cast<size_t>(round(static_cast<float>(X.size()) * proposed_cuts));
-        return static_cast<size_t>(proposed_cuts);
+            return static_cast<size_t>(round(static_cast<precision_t>(X.size()) * proposed_cuts));
+        return static_cast<size_t>(proposed_cuts); // The 2 extra cutpoints should not be considered here as this parameter is considered before they are added
     }
 
     void CPPFImdlp::fit(samples_t& X_, labels_t& y_)
@@ -37,6 +41,7 @@ namespace mdlp {
         y = y_;
         num_cut_points = compute_max_num_cut_points();
         depth = 0;
+        discretizedData.clear();
         cutPoints.clear();
         if (X.size() != y.size()) {
             throw invalid_argument("X and y must have the same size");
@@ -60,6 +65,10 @@ namespace mdlp {
                 resizeCutPoints();
             }
         }
+        // Insert first & last X value to the cutpoints as them shall be ignored in transform
+        auto [vmin, vmax] = std::minmax_element(X.begin(), X.end());
+        cutPoints.push_back(*vmax);
+        cutPoints.insert(cutPoints.begin(), *vmin);
     }
 
     pair<precision_t, size_t> CPPFImdlp::valueCutPoint(size_t start, size_t cut, size_t end)
@@ -177,7 +186,7 @@ namespace mdlp {
     indices_t CPPFImdlp::sortIndices(samples_t& X_, labels_t& y_)
     {
         indices_t idx(X_.size());
-        iota(idx.begin(), idx.end(), 0);
+        std::iota(idx.begin(), idx.end(), 0);
         stable_sort(idx.begin(), idx.end(), [&X_, &y_](size_t i1, size_t i2) {
             if (X_[i1] == X_[i2])
                 return y_[i1] < y_[i2];
@@ -208,4 +217,5 @@ namespace mdlp {
         }
         cutPoints.erase(cutPoints.begin() + static_cast<long>(maxEntropyIdx));
     }
+
 }

src/CPPFImdlp.h

@@ -1,14 +1,27 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #ifndef CPPFIMDLP_H
 #define CPPFIMDLP_H
 
 #include "typesFImdlp.h"
-#include "Metrics.h"
 #include <limits>
 #include <utility>
 #include <string>
+#include "Metrics.h"
+#include "Discretizer.h"
 
 namespace mdlp {
-    class CPPFImdlp {
+    class CPPFImdlp : public Discretizer {
+    public:
+        CPPFImdlp() = default;
+        CPPFImdlp(size_t min_length_, int max_depth_, float proposed);
+        virtual ~CPPFImdlp() = default;
+        void fit(samples_t& X_, labels_t& y_) override;
+        inline int get_depth() const { return depth; };
     protected:
         size_t min_length = 3;
         int depth = 0;
@@ -18,26 +31,14 @@ namespace mdlp {
         samples_t X = samples_t();
         labels_t y = labels_t();
         Metrics metrics = Metrics(y, indices);
-        cutPoints_t cutPoints;
         size_t num_cut_points = numeric_limits<size_t>::max();
-
         static indices_t sortIndices(samples_t&, labels_t&);
-
         void computeCutPoints(size_t, size_t, int);
         void resizeCutPoints();
         bool mdlp(size_t, size_t, size_t);
         size_t getCandidate(size_t, size_t);
         size_t compute_max_num_cut_points() const;
         pair<precision_t, size_t> valueCutPoint(size_t, size_t, size_t);
-
-    public:
-        CPPFImdlp();
-        CPPFImdlp(size_t, int, float);
-        ~CPPFImdlp();
-        void fit(samples_t&, labels_t&);
-        inline cutPoints_t getCutPoints() const { return cutPoints; };
-        inline int get_depth() const { return depth; };
-        static inline string version() { return "1.1.2"; };
     };
 }
 #endif

src/Discretizer.cpp

@@ -0,0 +1,54 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#include "Discretizer.h"
+
+namespace mdlp {
+
+    labels_t& Discretizer::transform(const samples_t& data)
+    {
+        discretizedData.clear();
+        discretizedData.reserve(data.size());
+        // CutPoints always have at least two items
+        // Have to ignore first and last cut points provided
+        auto first = cutPoints.begin() + 1;
+        auto last = cutPoints.end() - 1;
+        auto bound = direction == bound_dir_t::LEFT ? std::lower_bound<std::vector<precision_t>::iterator, precision_t> : std::upper_bound<std::vector<precision_t>::iterator, precision_t>;
+        for (const precision_t& item : data) {
+            auto pos = bound(first, last, item);
+            auto number = pos - first;
+            discretizedData.push_back(static_cast<label_t>(number));
+        }
+        return discretizedData;
+    }
+    labels_t& Discretizer::fit_transform(samples_t& X_, labels_t& y_)
+    {
+        fit(X_, y_);
+        return transform(X_);
+    }
+    void Discretizer::fit_t(const torch::Tensor& X_, const torch::Tensor& y_)
+    {
+        auto num_elements = X_.numel();
+        samples_t X(X_.data_ptr<precision_t>(), X_.data_ptr<precision_t>() + num_elements);
+        labels_t y(y_.data_ptr<int>(), y_.data_ptr<int>() + num_elements);
+        fit(X, y);
+    }
+    torch::Tensor Discretizer::transform_t(const torch::Tensor& X_)
+    {
+        auto num_elements = X_.numel();
+        samples_t X(X_.data_ptr<precision_t>(), X_.data_ptr<precision_t>() + num_elements);
+        auto result = transform(X);
+        return torch::tensor(result, torch_label_t);
+    }
+    torch::Tensor Discretizer::fit_transform_t(const torch::Tensor& X_, const torch::Tensor& y_)
+    {
+        auto num_elements = X_.numel();
+        samples_t X(X_.data_ptr<precision_t>(), X_.data_ptr<precision_t>() + num_elements);
+        labels_t y(y_.data_ptr<int>(), y_.data_ptr<int>() + num_elements);
+        auto result = fit_transform(X, y);
+        return torch::tensor(result, torch_label_t);
+    }
+}

src/Discretizer.h

@@ -0,0 +1,39 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#ifndef DISCRETIZER_H
+#define DISCRETIZER_H
+
+#include <string>
+#include <algorithm>
+#include "typesFImdlp.h"
+#include <torch/torch.h>
+
+namespace mdlp {
+    enum class bound_dir_t {
+        LEFT,
+        RIGHT
+    };
+    const auto torch_label_t = torch::kInt32;
+    class Discretizer {
+    public:
+        Discretizer() = default;
+        virtual ~Discretizer() = default;
+        inline cutPoints_t getCutPoints() const { return cutPoints; };
+        virtual void fit(samples_t& X_, labels_t& y_) = 0;
+        labels_t& transform(const samples_t& data);
+        labels_t& fit_transform(samples_t& X_, labels_t& y_);
+        void fit_t(const torch::Tensor& X_, const torch::Tensor& y_);
+        torch::Tensor transform_t(const torch::Tensor& X_);
+        torch::Tensor fit_transform_t(const torch::Tensor& X_, const torch::Tensor& y_);
+        static inline std::string version() { return "2.0.1"; };
+    protected:
+        labels_t discretizedData = labels_t();
+        cutPoints_t cutPoints; // At least two cutpoints must be provided, the first and the last will be ignored in transform
+        bound_dir_t direction; // used in transform
+    };
+}
+#endif

src/Metrics.cpp

@@ -1,11 +1,17 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #include "Metrics.h"
 #include <set>
 #include <cmath>
 
 using namespace std;
 namespace mdlp {
-    Metrics::Metrics(labels_t& y_, indices_t& indices_): y(y_), indices(indices_),
-        numClasses(computeNumClasses(0, indices.size()))
+    Metrics::Metrics(labels_t& y_, indices_t& indices_) : y(y_), indices(indices_),
+        numClasses(computeNumClasses(0, indices_.size()))
     {
     }
 

src/Metrics.h

@@ -1,3 +1,9 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #ifndef CCMETRICS_H
 #define CCMETRICS_H
 

src/typesFImdlp.h

@@ -0,0 +1,25 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#ifndef TYPES_H
+#define TYPES_H
+
+#include <vector>
+#include <map>
+#include <stdexcept>
+
+using namespace std;
+namespace mdlp {
+    typedef float precision_t;
+    typedef int label_t;
+    typedef std::vector<precision_t> samples_t;
+    typedef std::vector<label_t> labels_t;
+    typedef std::vector<size_t> indices_t;
+    typedef std::vector<precision_t> cutPoints_t;
+    typedef std::map<std::pair<int, int>, precision_t> cacheEnt_t;
+    typedef std::map<std::tuple<int, int, int>, precision_t> cacheIg_t;
+}
+#endif

tests/ArffFiles.cpp

@@ -1,132 +0,0 @@
-#include "ArffFiles.h"
-#include <fstream>
-#include <sstream>
-#include <map>
-
-using namespace std;
-
-ArffFiles::ArffFiles() = default;
-
-vector<string> ArffFiles::getLines() const
-{
-    return lines;
-}
-
-unsigned long int ArffFiles::getSize() const
-{
-    return lines.size();
-}
-
-vector<pair<string, string>> ArffFiles::getAttributes() const
-{
-    return attributes;
-}
-
-string ArffFiles::getClassName() const
-{
-    return className;
-}
-
-string ArffFiles::getClassType() const
-{
-    return classType;
-}
-
-vector<mdlp::samples_t>& ArffFiles::getX()
-{
-    return X;
-}
-
-vector<int>& ArffFiles::getY()
-{
-    return y;
-}
-
-void ArffFiles::load(const string& fileName, bool classLast)
-{
-    ifstream file(fileName);
-    if (!file.is_open()) {
-        throw invalid_argument("Unable to open file");
-    }
-    string line;
-    string keyword;
-    string attribute;
-    string type;
-    string type_w;
-    while (getline(file, line)) {
-        if (line.empty() || line[0] == '%' || line == "\r" || line == " ") {
-            continue;
-        }
-        if (line.find("@attribute") != string::npos || line.find("@ATTRIBUTE") != string::npos) {
-            stringstream ss(line);
-            ss >> keyword >> attribute;
-            type = "";
-            while (ss >> type_w)
-                type += type_w + " ";
-            attributes.emplace_back(attribute, trim(type));
-            continue;
-        }
-        if (line[0] == '@') {
-            continue;
-        }
-        lines.push_back(line);
-    }
-    file.close();
-    if (attributes.empty())
-        throw invalid_argument("No attributes found");
-    if (classLast) {
-        className = get<0>(attributes.back());
-        classType = get<1>(attributes.back());
-        attributes.pop_back();
-    } else {
-        className = get<0>(attributes.front());
-        classType = get<1>(attributes.front());
-        attributes.erase(attributes.begin());
-    }
-    generateDataset(classLast);
-
-}
-
-void ArffFiles::generateDataset(bool classLast)
-{
-    X = vector<mdlp::samples_t>(attributes.size(), mdlp::samples_t(lines.size()));
-    auto yy = vector<string>(lines.size(), "");
-    int labelIndex = classLast ? static_cast<int>(attributes.size()) : 0;
-    for (size_t i = 0; i < lines.size(); i++) {
-        stringstream ss(lines[i]);
-        string value;
-        int pos = 0;
-        int xIndex = 0;
-        while (getline(ss, value, ',')) {
-            if (pos++ == labelIndex) {
-                yy[i] = value;
-            } else {
-                X[xIndex++][i] = stof(value);
-            }
-        }
-    }
-    y = factorize(yy);
-}
-
-string ArffFiles::trim(const string& source)
-{
-    string s(source);
-    s.erase(0, s.find_first_not_of(" \n\r\t"));
-    s.erase(s.find_last_not_of(" \n\r\t") + 1);
-    return s;
-}
-
-vector<int> ArffFiles::factorize(const vector<string>& labels_t)
-{
-    vector<int> yy;
-    yy.reserve(labels_t.size());
-    map<string, int> labelMap;
-    int i = 0;
-    for (const string& label : labels_t) {
-        if (labelMap.find(label) == labelMap.end()) {
-            labelMap[label] = i++;
-        }
-        yy.push_back(labelMap[label]);
-    }
-    return yy;
-}

tests/ArffFiles.h

@@ -1,35 +0,0 @@
-#ifndef ARFFFILES_H
-#define ARFFFILES_H
-
-#include <string>
-#include <vector>
-#include "../typesFImdlp.h"
-
-using namespace std;
-
-class ArffFiles {
-private:
-    vector<string> lines;
-    vector<pair<string, string>> attributes;
-    string className;
-    string classType;
-    vector<mdlp::samples_t> X;
-    vector<int> y;
-
-    void generateDataset(bool);
-
-public:
-    ArffFiles();
-    void load(const string&, bool = true);
-    vector<string> getLines() const;
-    unsigned long int getSize() const;
-    string getClassName() const;
-    string getClassType() const;
-    static string trim(const string&);
-    vector<mdlp::samples_t>& getX();
-    vector<int>& getY();
-    vector<pair<string, string>> getAttributes() const;
-    static vector<int> factorize(const vector<string>& labels_t);
-};
-
-#endif

tests/BinDisc_unittest.cpp

@@ -0,0 +1,411 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#include <fstream>
+#include <string>
+#include <iostream>
+#include "gtest/gtest.h"
+#include <ArffFiles.hpp>
+#include "BinDisc.h"
+#include "Experiments.hpp"
+
+namespace mdlp {
+    const float margin = 1e-4;
+    static std::string set_data_path()
+    {
+        std::string path = "../datasets/";
+        std::ifstream file(path + "iris.arff");
+        if (file.is_open()) {
+            file.close();
+            return path;
+        }
+        return "../../tests/datasets/";
+    }
+    const std::string data_path = set_data_path();
+    class TestBinDisc3U : public BinDisc, public testing::Test {
+    public:
+        TestBinDisc3U(int n_bins = 3) : BinDisc(n_bins, strategy_t::UNIFORM) {};
+    };
+    class TestBinDisc3Q : public BinDisc, public testing::Test {
+    public:
+        TestBinDisc3Q(int n_bins = 3) : BinDisc(n_bins, strategy_t::QUANTILE) {};
+    };
+    class TestBinDisc4U : public BinDisc, public testing::Test {
+    public:
+        TestBinDisc4U(int n_bins = 4) : BinDisc(n_bins, strategy_t::UNIFORM) {};
+    };
+    class TestBinDisc4Q : public BinDisc, public testing::Test {
+    public:
+        TestBinDisc4Q(int n_bins = 4) : BinDisc(n_bins, strategy_t::QUANTILE) {};
+    };
+    TEST_F(TestBinDisc3U, Easy3BinsUniform)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0 };
+        auto y = labels_t();
+        fit(X, y);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(3.66667, cuts.at(1), margin);
+        EXPECT_NEAR(6.33333, cuts.at(2), margin);
+        EXPECT_NEAR(9.0, cuts.at(3), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3Q, Easy3BinsQuantile)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts[0], margin);
+        EXPECT_NEAR(3.666667, cuts[1], margin);
+        EXPECT_NEAR(6.333333, cuts[2], margin);
+        EXPECT_NEAR(9, cuts[3], margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3U, X10BinsUniform)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(4.0, cuts.at(1), margin);
+        EXPECT_NEAR(7.0, cuts.at(2), margin);
+        EXPECT_NEAR(10.0, cuts.at(3), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2, 2 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3Q, X10BinsQuantile)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(4.0, cuts.at(1), margin);
+        EXPECT_NEAR(7.0, cuts.at(2), margin);
+        EXPECT_NEAR(10.0, cuts.at(3), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2, 2 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3U, X11BinsUniform)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(4.33333, cuts.at(1), margin);
+        EXPECT_NEAR(7.66667, cuts.at(2), margin);
+        EXPECT_NEAR(11.0, cuts.at(3), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 0, 1, 1, 1, 2, 2, 2, 2 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3U, X11BinsQuantile)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(4.33333, cuts.at(1), margin);
+        EXPECT_NEAR(7.66667, cuts.at(2), margin);
+        EXPECT_NEAR(11.0, cuts.at(3), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 0, 1, 1, 1, 2, 2, 2, 2 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3U, ConstantUniform)
+    {
+        samples_t X = { 1.0, 1.0, 1.0, 1.0, 1.0, 1.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(2, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(1, cuts.at(1), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 0, 0, 0 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3Q, ConstantQuantile)
+    {
+        samples_t X = { 1.0, 1.0, 1.0, 1.0, 1.0, 1.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(2, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(1, cuts.at(1), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 0, 0, 0 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc3U, EmptyUniform)
+    {
+        samples_t X = {};
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(2, cuts.size());
+        EXPECT_NEAR(0, cuts.at(0), margin);
+        EXPECT_NEAR(0, cuts.at(1), margin);
+    }
+    TEST_F(TestBinDisc3Q, EmptyQuantile)
+    {
+        samples_t X = {};
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(2, cuts.size());
+        EXPECT_NEAR(0, cuts.at(0), margin);
+        EXPECT_NEAR(0, cuts.at(1), margin);
+    }
+    TEST(TestBinDisc3, ExceptionNumberBins)
+    {
+        EXPECT_THROW(BinDisc(2), std::invalid_argument);
+    }
+    TEST_F(TestBinDisc3U, EasyRepeated)
+    {
+        samples_t X = { 3.0, 1.0, 1.0, 3.0, 1.0, 1.0, 3.0, 1.0, 1.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(4, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(1.66667, cuts.at(1), margin);
+        EXPECT_NEAR(2.33333, cuts.at(2), margin);
+        EXPECT_NEAR(3.0, cuts.at(3), margin);
+        auto labels = transform(X);
+        labels_t expected = { 2, 0, 0, 2, 0, 0, 2, 0, 0 };
+        EXPECT_EQ(expected, labels);
+        ASSERT_EQ(3.0, X[0]); // X is not modified
+    }
+    TEST_F(TestBinDisc3Q, EasyRepeated)
+    {
+        samples_t X = { 3.0, 1.0, 1.0, 3.0, 1.0, 1.0, 3.0, 1.0, 1.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(3, cuts.size());
+        EXPECT_NEAR(1, cuts.at(0), margin);
+        EXPECT_NEAR(1.66667, cuts.at(1), margin);
+        EXPECT_NEAR(3.0, cuts.at(2), margin);
+        auto labels = transform(X);
+        labels_t expected = { 1, 0, 0, 1, 0, 0, 1, 0, 0 };
+        EXPECT_EQ(expected, labels);
+        ASSERT_EQ(3.0, X[0]); // X is not modified
+    }
+    TEST_F(TestBinDisc4U, Easy4BinsUniform)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(3.75, cuts.at(1), margin);
+        EXPECT_NEAR(6.5, cuts.at(2), margin);
+        EXPECT_NEAR(9.25, cuts.at(3), margin);
+        EXPECT_NEAR(12.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4Q, Easy4BinsQuantile)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(3.75, cuts.at(1), margin);
+        EXPECT_NEAR(6.5, cuts.at(2), margin);
+        EXPECT_NEAR(9.25, cuts.at(3), margin);
+        EXPECT_NEAR(12.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4U, X13BinsUniform)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(4.0, cuts.at(1), margin);
+        EXPECT_NEAR(7.0, cuts.at(2), margin);
+        EXPECT_NEAR(10.0, cuts.at(3), margin);
+        EXPECT_NEAR(13.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2, 3, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4Q, X13BinsQuantile)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(4.0, cuts.at(1), margin);
+        EXPECT_NEAR(7.0, cuts.at(2), margin);
+        EXPECT_NEAR(10.0, cuts.at(3), margin);
+        EXPECT_NEAR(13.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 1, 1, 1, 2, 2, 2, 3, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4U, X14BinsUniform)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(4.25, cuts.at(1), margin);
+        EXPECT_NEAR(7.5, cuts.at(2), margin);
+        EXPECT_NEAR(10.75, cuts.at(3), margin);
+        EXPECT_NEAR(14.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 0, 1, 1, 1, 2, 2, 2, 3, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4Q, X14BinsQuantile)
+    {
+        samples_t X = { 1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(4.25, cuts.at(1), margin);
+        EXPECT_NEAR(7.5, cuts.at(2), margin);
+        EXPECT_NEAR(10.75, cuts.at(3), margin);
+        EXPECT_NEAR(14.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 0, 0, 0, 1, 1, 1, 2, 2, 2, 3, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4U, X15BinsUniform)
+    {
+        samples_t X = { 15.0, 8.0, 12.0, 14.0, 6.0, 1.0, 13.0, 11.0, 10.0, 9.0, 7.0, 4.0, 3.0, 5.0, 2.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(4.5, cuts.at(1), margin);
+        EXPECT_NEAR(8, cuts.at(2), margin);
+        EXPECT_NEAR(11.5, cuts.at(3), margin);
+        EXPECT_NEAR(15.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 3, 2, 3, 3, 1, 0, 3, 2, 2, 2, 1, 0, 0, 1, 0 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4Q, X15BinsQuantile)
+    {
+        samples_t X = { 15.0, 13.0, 12.0, 14.0, 6.0, 1.0, 8.0, 11.0, 10.0, 9.0, 7.0, 4.0, 3.0, 5.0, 2.0 };
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(1.0, cuts.at(0), margin);
+        EXPECT_NEAR(4.5, cuts.at(1), margin);
+        EXPECT_NEAR(8, cuts.at(2), margin);
+        EXPECT_NEAR(11.5, cuts.at(3), margin);
+        EXPECT_NEAR(15.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 3, 3, 3, 3, 1, 0, 2, 2, 2, 2, 1, 0, 0, 1, 0 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4U, RepeatedValuesUniform)
+    {
+        samples_t X = { 0.0, 1.0, 1.0, 1.0, 2.0, 2.0, 3.0, 3.0, 3.0, 4.0 };
+        //               0    1     2   3    4    5    6    7    8    9
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(0.0, cuts.at(0), margin);
+        EXPECT_NEAR(1.0, cuts.at(1), margin);
+        EXPECT_NEAR(2.0, cuts.at(2), margin);
+        EXPECT_NEAR(3.0, cuts.at(3), margin);
+        EXPECT_NEAR(4.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 1, 1, 1, 2, 2, 3, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST_F(TestBinDisc4Q, RepeatedValuesQuantile)
+    {
+        samples_t X = { 0.0, 1.0, 1.0, 1.0, 2.0, 2.0, 3.0, 3.0, 3.0, 4.0 };
+        //               0    1     2   3    4    5    6    7    8    9
+        fit(X);
+        auto cuts = getCutPoints();
+        ASSERT_EQ(5, cuts.size());
+        EXPECT_NEAR(0.0, cuts.at(0), margin);
+        EXPECT_NEAR(1.0, cuts.at(1), margin);
+        EXPECT_NEAR(2.0, cuts.at(2), margin);
+        EXPECT_NEAR(3.0, cuts.at(3), margin);
+        EXPECT_NEAR(4.0, cuts.at(4), margin);
+        auto labels = transform(X);
+        labels_t expected = { 0, 1, 1, 1, 2, 2, 3, 3, 3, 3 };
+        EXPECT_EQ(expected, labels);
+    }
+    TEST(TestBinDiscGeneric, Fileset)
+    {
+        Experiments exps(data_path + "tests.txt");
+        int num = 0;
+        while (exps.is_next()) {
+            ++num;
+            Experiment exp = exps.next();
+            BinDisc disc(exp.n_bins_, exp.strategy_[0] == 'Q' ? strategy_t::QUANTILE : strategy_t::UNIFORM);
+            std::vector<precision_t> test;
+            if (exp.type_ == experiment_t::RANGE) {
+                for (float i = exp.from_; i < exp.to_; i += exp.step_) {
+                    test.push_back(i);
+                }
+            } else {
+                test = exp.dataset_;
+            }
+            // show_vector(test, "Test");
+            auto empty = std::vector<int>();
+            auto Xt = disc.fit_transform(test, empty);
+            auto cuts = disc.getCutPoints();
+            EXPECT_EQ(exp.discretized_data_.size(), Xt.size());
+            auto flag = false;
+            size_t n_errors = 0;
+            if (num < 40) {
+                //
+                // Check discretization of only the first 40 tests as after we cannot ensure the same codification due to precision problems
+                //
+                for (int i = 0; i < exp.discretized_data_.size(); ++i) {
+                    if (exp.discretized_data_.at(i) != Xt.at(i)) {
+                        if (!flag) {
+                            if (exp.type_ == experiment_t::RANGE)
+                                std::cout << "+Exp #: " << num << " From: " << exp.from_ << " To: " << exp.to_ << " Step: " << exp.step_ << " Bins: " << exp.n_bins_ << " Strategy: " << exp.strategy_ << std::endl;
+                            else {
+                                std::cout << "+Exp #: " << num << " strategy: " << exp.strategy_ << " " << " n_bins: " << exp.n_bins_ << " ";
+                                show_vector(exp.dataset_, "Dataset");
+                            }
+                            show_vector(cuts, "Cuts");
+                            std::cout << "Error at " << i << " test[i]=" << test.at(i) << " Expected: " << exp.discretized_data_.at(i) << " Got: " << Xt.at(i) << std::endl;
+                            flag = true;
+                            EXPECT_EQ(exp.discretized_data_.at(i), Xt.at(i));
+                        }
+                        n_errors++;
+                    }
+                }
+                if (flag) {
+                    std::cout << "*** Found " << n_errors << " mistakes in this experiment dataset" << std::endl;
+                }
+            }
+            EXPECT_EQ(exp.cutpoints_.size(), cuts.size());
+            for (int i = 0; i < exp.cutpoints_.size(); ++i) {
+                EXPECT_NEAR(exp.cutpoints_.at(i), cuts.at(i), margin);
+            }
+        }
+        std::cout << "* Number of experiments tested: " << num << std::endl;
+    }
+}

tests/CMakeLists.txt

@@ -1,9 +1,5 @@
-set(CMAKE_CXX_STANDARD 11)
 include(FetchContent)
-
 include_directories(${GTEST_INCLUDE_DIRS})
-
-
 FetchContent_Declare(
         googletest
         URL https://github.com/google/googletest/archive/03597a01ee50ed33e9dfd640b249b4be3799d395.zip
@@ -12,18 +8,37 @@ FetchContent_Declare(
 set(gtest_force_shared_crt ON CACHE BOOL "" FORCE)
 FetchContent_MakeAvailable(googletest)
 
-enable_testing()
+include_directories(
+        ${TORCH_INCLUDE_DIRS}
+        ${fimdlp_SOURCE_DIR}/src
+        ${fimdlp_SOURCE_DIR}/tests/lib/Files
+)
 
-add_executable(Metrics_unittest ../Metrics.cpp Metrics_unittest.cpp)
-add_executable(FImdlp_unittest ../CPPFImdlp.cpp ArffFiles.cpp ../Metrics.cpp FImdlp_unittest.cpp)
+add_executable(Metrics_unittest ${fimdlp_SOURCE_DIR}/src/Metrics.cpp Metrics_unittest.cpp)
 target_link_libraries(Metrics_unittest GTest::gtest_main)
-target_link_libraries(FImdlp_unittest GTest::gtest_main)
 target_compile_options(Metrics_unittest PRIVATE --coverage)
-target_compile_options(FImdlp_unittest PRIVATE --coverage)
 target_link_options(Metrics_unittest PRIVATE --coverage)
+
+add_executable(FImdlp_unittest FImdlp_unittest.cpp
+${fimdlp_SOURCE_DIR}/src/CPPFImdlp.cpp ${fimdlp_SOURCE_DIR}/src/Metrics.cpp  ${fimdlp_SOURCE_DIR}/src/Discretizer.cpp)
+target_link_libraries(FImdlp_unittest GTest::gtest_main "${TORCH_LIBRARIES}")
+target_compile_options(FImdlp_unittest PRIVATE --coverage)
 target_link_options(FImdlp_unittest PRIVATE --coverage)
 
+add_executable(BinDisc_unittest BinDisc_unittest.cpp ${fimdlp_SOURCE_DIR}/src/BinDisc.cpp  ${fimdlp_SOURCE_DIR}/src/Discretizer.cpp)
+target_link_libraries(BinDisc_unittest GTest::gtest_main "${TORCH_LIBRARIES}")
+target_compile_options(BinDisc_unittest PRIVATE --coverage)
+target_link_options(BinDisc_unittest PRIVATE --coverage)
+
+add_executable(Discretizer_unittest Discretizer_unittest.cpp
+${fimdlp_SOURCE_DIR}/src/BinDisc.cpp ${fimdlp_SOURCE_DIR}/src/CPPFImdlp.cpp ${fimdlp_SOURCE_DIR}/src/Metrics.cpp ${fimdlp_SOURCE_DIR}/src/Discretizer.cpp )
+target_link_libraries(Discretizer_unittest GTest::gtest_main "${TORCH_LIBRARIES}")
+target_compile_options(Discretizer_unittest PRIVATE --coverage)
+target_link_options(Discretizer_unittest PRIVATE --coverage)
+
 include(GoogleTest)
+
 gtest_discover_tests(Metrics_unittest)
 gtest_discover_tests(FImdlp_unittest)
-
+gtest_discover_tests(BinDisc_unittest)
+gtest_discover_tests(Discretizer_unittest)

tests/Discretizer_unittest.cpp

@@ -0,0 +1,274 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#include <fstream>
+#include <string>
+#include <iostream>
+#include <ArffFiles.hpp>
+#include "gtest/gtest.h"
+#include "Discretizer.h"
+#include "BinDisc.h"
+#include "CPPFImdlp.h"
+
+namespace mdlp {
+    const float margin = 1e-4;
+    static std::string set_data_path()
+    {
+        std::string path = "../datasets/";
+        std::ifstream file(path + "iris.arff");
+        if (file.is_open()) {
+            file.close();
+            return path;
+        }
+        return "../../tests/datasets/";
+    }
+    const std::string data_path = set_data_path();
+    const labels_t iris_quantile = { 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 2, 1, 1, 1, 1, 1, 1, 1, 0, 1, 0, 0, 0, 1, 1, 0, 0, 1, 1, 1, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 1, 0, 1, 0, 1, 0, 3, 3, 3, 1, 3, 1, 2, 0, 3, 1, 0, 2, 2, 2, 1, 3, 1, 2, 2, 1, 2, 2, 2, 2, 3, 3, 3, 3, 2, 1, 1, 1, 2, 2, 1, 2, 3, 2, 1, 1, 1, 2, 2, 0, 1, 1, 1, 2, 1, 1, 2, 2, 3, 2, 3, 3, 0, 3, 3, 3, 3, 3, 3, 1, 2, 3, 3, 3, 3, 2, 3, 1, 3, 2, 3, 3, 2, 2, 3, 3, 3, 3, 3, 2, 2, 3, 2, 3, 2, 3, 3, 3, 2, 3, 3, 3, 2, 3, 2, 2 };
+    TEST(Discretizer, Version)
+    {
+        Discretizer* disc = new BinDisc(4, strategy_t::UNIFORM);
+        auto version = disc->version();
+        delete disc;
+        std::cout << "Version computed: " << version;
+        EXPECT_EQ("2.0.1", version);
+    }
+    TEST(Discretizer, BinIrisUniform)
+    {
+        ArffFiles file;
+        Discretizer* disc = new BinDisc(4, strategy_t::UNIFORM);
+        file.load(data_path + "iris.arff", true);
+        vector<samples_t>& X = file.getX();
+        auto y = labels_t();
+        disc->fit(X[0], y);
+        auto Xt = disc->transform(X[0]);
+        labels_t expected = { 0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 1, 1, 1, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 3, 2, 2, 1, 2, 1, 2, 0, 2, 0, 0, 1, 1, 1, 1, 2, 1, 1, 2, 1, 1, 1, 2, 1, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 1, 1, 0, 1, 1, 1, 2, 0, 1, 2, 1, 3, 2, 2, 3, 0, 3, 2, 3, 2, 2, 2, 1, 1, 2, 2, 3, 3, 1, 2, 1, 3, 2, 2, 3, 2, 1, 2, 3, 3, 3, 2, 2, 1, 3, 2, 2, 1, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 1 };
+        delete disc;
+        EXPECT_EQ(expected, Xt);
+    }
+    TEST(Discretizer, BinIrisQuantile)
+    {
+        ArffFiles file;
+        Discretizer* disc = new BinDisc(4, strategy_t::QUANTILE);
+        file.load(data_path + "iris.arff", true);
+        vector<samples_t>& X = file.getX();
+        auto y = labels_t();
+        disc->fit(X[0], y);
+        auto Xt = disc->transform(X[0]);
+        delete disc;
+        EXPECT_EQ(iris_quantile, Xt);
+    }
+
+    TEST(Discretizer, BinIrisQuantileTorch)
+    {
+        ArffFiles file;
+        Discretizer* disc = new BinDisc(4, strategy_t::QUANTILE);
+        file.load(data_path + "iris.arff", true);
+        auto X = file.getX();
+        auto y = file.getY();
+        auto X_torch = torch::tensor(X[0], torch::kFloat32);
+        auto yt = torch::tensor(y, torch::kInt32);
+        disc->fit_t(X_torch, yt);
+        torch::Tensor Xt = disc->transform_t(X_torch);
+        delete disc;
+        EXPECT_EQ(iris_quantile.size(), Xt.size(0));
+        for (int i = 0; i < iris_quantile.size(); ++i) {
+            EXPECT_EQ(iris_quantile.at(i), Xt[i].item<int>());
+        }
+    }
+    TEST(Discretizer, BinIrisQuantileTorchFit_transform)
+    {
+        ArffFiles file;
+        Discretizer* disc = new BinDisc(4, strategy_t::QUANTILE);
+        file.load(data_path + "iris.arff", true);
+        auto X = file.getX();
+        auto y = file.getY();
+        auto X_torch = torch::tensor(X[0], torch::kFloat32);
+        auto yt = torch::tensor(y, torch::kInt32);
+        torch::Tensor Xt = disc->fit_transform_t(X_torch, yt);
+        delete disc;
+        EXPECT_EQ(iris_quantile.size(), Xt.size(0));
+        for (int i = 0; i < iris_quantile.size(); ++i) {
+            EXPECT_EQ(iris_quantile.at(i), Xt[i].item<int>());
+        }
+    }
+
+    TEST(Discretizer, FImdlpIris)
+    {
+        auto labelsq = {
+            1,
+                0,
+                0,
+                0,
+                0,
+                1,
+                0,
+                0,
+                0,
+                0,
+                1,
+                0,
+                0,
+                0,
+                2,
+                1,
+                1,
+                1,
+                1,
+                1,
+                1,
+                1,
+                0,
+                1,
+                0,
+                0,
+                0,
+                1,
+                1,
+                0,
+                0,
+                1,
+                1,
+                1,
+                0,
+                0,
+                1,
+                0,
+                0,
+                1,
+                0,
+                0,
+                0,
+                0,
+                1,
+                0,
+                1,
+                0,
+                1,
+                0,
+                3,
+                3,
+                3,
+                1,
+                3,
+                1,
+                2,
+                0,
+                3,
+                1,
+                0,
+                2,
+                2,
+                2,
+                1,
+                3,
+                1,
+                2,
+                2,
+                1,
+                2,
+                2,
+                2,
+                2,
+                3,
+                3,
+                3,
+                3,
+                2,
+                1,
+                1,
+                1,
+                2,
+                2,
+                1,
+                2,
+                3,
+                2,
+                1,
+                1,
+                1,
+                2,
+                2,
+                0,
+                1,
+                1,
+                1,
+                2,
+                1,
+                1,
+                2,
+                2,
+                3,
+                2,
+                3,
+                3,
+                0,
+                3,
+                3,
+                3,
+                3,
+                3,
+                3,
+                1,
+                2,
+                3,
+                3,
+                3,
+                3,
+                2,
+                3,
+                1,
+                3,
+                2,
+                3,
+                3,
+                2,
+                2,
+                3,
+                3,
+                3,
+                3,
+                3,
+                2,
+                2,
+                3,
+                2,
+                3,
+                2,
+                3,
+                3,
+                3,
+                2,
+                3,
+                3,
+                3,
+                2,
+                3,
+                2,
+                2,
+        };
+        labels_t expected = {
+            5, 3, 4, 4, 5, 5, 5, 5, 2, 4, 5, 5, 3, 3, 5, 5, 5, 5, 5, 5, 5, 5,
+            5, 4, 5, 3, 5, 5, 5, 4, 4, 5, 5, 5, 4, 4, 5, 4, 3, 5, 5, 0, 4, 5,
+            5, 3, 5, 4, 5, 4, 4, 4, 4, 0, 1, 1, 4, 0, 2, 0, 0, 3, 0, 2, 2, 4,
+            3, 0, 0, 0, 4, 1, 0, 1, 2, 3, 1, 3, 2, 0, 0, 0, 0, 0, 3, 5, 4, 0,
+            3, 0, 0, 3, 0, 0, 0, 3, 2, 2, 0, 1, 4, 0, 3, 2, 3, 3, 0, 2, 0, 5,
+            4, 0, 3, 0, 1, 4, 3, 5, 0, 0, 4, 1, 1, 0, 4, 4, 1, 3, 1, 3, 1, 5,
+            1, 1, 0, 3, 5, 4, 3, 4, 4, 4, 0, 4, 4, 3, 0, 3, 5, 3
+        };
+        ArffFiles file;
+        Discretizer* disc = new CPPFImdlp();
+        file.load(data_path + "iris.arff", true);
+        vector<samples_t>& X = file.getX();
+        labels_t& y = file.getY();
+        disc->fit(X[1], y);
+        auto computed = disc->transform(X[1]);
+        delete disc;
+        EXPECT_EQ(computed.size(), expected.size());
+        for (unsigned long i = 0; i < computed.size(); i++) {
+            EXPECT_EQ(computed[i], expected[i]);
+        }
+    }
+}

tests/Experiments.hpp

@@ -0,0 +1,139 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
+#ifndef EXPERIMENTS_HPP
+#define EXPERIMENTS_HPP
+#include<sstream>
+#include<iostream>
+#include<string>
+#include<fstream>
+#include<vector>
+#include<tuple>
+#include "typesFImdlp.h"
+
+template <typename T>
+void show_vector(const std::vector<T>& data, std::string title)
+{
+    std::cout << title << ": ";
+    std::string sep = "";
+    for (const auto& d : data) {
+        std::cout << sep << d;
+        sep = ", ";
+    }
+    std::cout << std::endl;
+}
+enum class experiment_t {
+    RANGE,
+    VECTOR
+};
+class Experiment {
+public:
+    Experiment(float from_, float to_, float step_, int n_bins, std::string strategy, std::vector<int> data_discretized, std::vector<mdlp::precision_t> cutpoints) :
+        from_{ from_ }, to_{ to_ }, step_{ step_ }, n_bins_{ n_bins }, strategy_{ strategy }, discretized_data_{ data_discretized }, cutpoints_{ cutpoints }, type_{ experiment_t::RANGE }
+    {
+        validate_strategy();
+
+    }
+    Experiment(std::vector<mdlp::precision_t> dataset, int n_bins, std::string strategy, std::vector<int> data_discretized, std::vector<mdlp::precision_t> cutpoints) :
+        n_bins_{ n_bins }, strategy_{ strategy }, dataset_{ dataset }, discretized_data_{ data_discretized }, cutpoints_{ cutpoints }, type_{ experiment_t::VECTOR }
+    {
+        validate_strategy();
+    }
+    void validate_strategy()
+    {
+        if (strategy_ != "Q" && strategy_ != "U") {
+            throw std::invalid_argument("Invalid strategy " + strategy_);
+        }
+    }
+    float from_;
+    float to_;
+    float step_;
+    int n_bins_;
+    std::string strategy_;
+    std::vector<mdlp::precision_t> dataset_;
+    std::vector<int> discretized_data_;
+    std::vector<mdlp::precision_t> cutpoints_;
+    experiment_t type_;
+};
+class Experiments {
+public:
+    Experiments(const std::string filename) : filename{ filename }
+    {
+        test_file.open(filename);
+        if (!test_file.is_open()) {
+            throw std::runtime_error("File " + filename + " not found");
+        }
+        exp_end = false;
+    }
+    ~Experiments()
+    {
+        test_file.close();
+    }
+    bool end() const
+    {
+        return exp_end;
+    }
+    bool is_next()
+    {
+        while (std::getline(test_file, line) && line[0] == '#');
+        if (test_file.eof()) {
+            exp_end = true;
+            return false;
+        }
+        return true;
+    }
+    Experiment next()
+    {
+        return parse_experiment(line);
+    }
+private:
+    std::tuple<float, float, float, int, std::string> parse_header(const std::string& line)
+    {
+        std::istringstream iss(line);
+        std::string from_, to_, step_, n_bins, strategy;
+        iss >> from_ >> to_ >> step_ >> n_bins >> strategy;
+        return { std::stof(from_), std::stof(to_), std::stof(step_), std::stoi(n_bins), strategy };
+    }
+    template <typename T>
+    std::vector<T> parse_vector(const std::string& line)
+    {
+        std::istringstream iss(line);
+        std::vector<T> data;
+        std::string d;
+        while (iss >> d) {
+            data.push_back(std::is_same<T, float>::value ? std::stof(d) : std::stoi(d));
+        }
+        return data;
+    }
+    Experiment parse_experiment(std::string& line)
+    {
+        // Read experiment lines
+        std::string experiment, data, cuts, strategy;
+        std::getline(test_file, experiment);
+        std::getline(test_file, data);
+        std::getline(test_file, cuts);
+        // split data into variables
+        float from_, to_, step_;
+        int n_bins;
+        std::vector<mdlp::precision_t> dataset;
+        auto data_discretized = parse_vector<int>(data);
+        auto cutpoints = parse_vector<mdlp::precision_t>(cuts);
+        if (line == "RANGE") {
+            tie(from_, to_, step_, n_bins, strategy) = parse_header(experiment);
+            return Experiment{ from_, to_, step_, n_bins, strategy, data_discretized, cutpoints };
+        }
+        strategy = experiment.substr(0, 1);
+        n_bins = std::stoi(experiment.substr(1, 1));
+        data = experiment.substr(3, experiment.size() - 4);
+        dataset = parse_vector<mdlp::precision_t>(data);
+        return Experiment(dataset, n_bins, strategy, data_discretized, cutpoints);
+    }
+    std::ifstream test_file;
+    std::string filename;
+    std::string line;
+    bool exp_end;
+};
+#endif

tests/FImdlp_unittest.cpp

@@ -1,9 +1,15 @@
-#include "gtest/gtest.h"
-#include "../Metrics.h"
-#include "../CPPFImdlp.h"
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #include <fstream>
 #include <iostream>
-#include "ArffFiles.h"
+#include <ArffFiles.hpp>
+#include "gtest/gtest.h"
+#include "Metrics.h"
+#include "CPPFImdlp.h"
 
 #define EXPECT_THROW_WITH_MESSAGE(stmt, etype, whatstring) EXPECT_THROW( \
 try { \
@@ -15,11 +21,11 @@ throw; \
 , etype)
 
 namespace mdlp {
-    class TestFImdlp: public CPPFImdlp, public testing::Test {
+    class TestFImdlp : public CPPFImdlp, public testing::Test {
     public:
         precision_t precision = 0.000001f;
 
-        TestFImdlp(): CPPFImdlp() {}
+        TestFImdlp() : CPPFImdlp() {}
 
         string data_path;
 
@@ -124,7 +130,7 @@ namespace mdlp {
     {
         samples_t X_ = { 1, 2, 2, 3, 4, 2, 3 };
         labels_t y_ = { 0, 0, 1, 2, 3, 4, 5 };
-        cutPoints_t expected = { 1.5f, 2.5f };
+        cutPoints_t expected = { 1.0, 1.5f, 2.5f, 4.0 };
         fit(X_, y_);
         auto computed = getCutPoints();
         EXPECT_EQ(computed.size(), expected.size());
@@ -167,29 +173,31 @@ namespace mdlp {
         y = { 1 };
         fit(X, y);
         computed = getCutPoints();
-        EXPECT_EQ(computed.size(), 0);
+        EXPECT_EQ(computed.size(), 2);
         X = { 1, 3 };
         y = { 1, 2 };
         fit(X, y);
         computed = getCutPoints();
-        EXPECT_EQ(computed.size(), 0);
+        EXPECT_EQ(computed.size(), 2);
         X = { 2, 4 };
         y = { 1, 2 };
         fit(X, y);
         computed = getCutPoints();
-        EXPECT_EQ(computed.size(), 0);
+        EXPECT_EQ(computed.size(), 2);
         X = { 1, 2, 3 };
         y = { 1, 2, 2 };
         fit(X, y);
         computed = getCutPoints();
-        EXPECT_EQ(computed.size(), 1);
-        EXPECT_NEAR(computed[0], 1.5, precision);
+        EXPECT_EQ(computed.size(), 3);
+        EXPECT_NEAR(computed[0], 1, precision);
+        EXPECT_NEAR(computed[1], 1.5, precision);
+        EXPECT_NEAR(computed[2], 3, precision);
     }
 
     TEST_F(TestFImdlp, TestArtificialDataset)
     {
         fit(X, y);
-        cutPoints_t expected = { 5.05f };
+        cutPoints_t expected = { 4.7, 5.05, 6.0 };
         vector<precision_t> computed = getCutPoints();
         EXPECT_EQ(computed.size(), expected.size());
         for (unsigned long i = 0; i < computed.size(); i++) {
@@ -200,10 +208,10 @@ namespace mdlp {
     TEST_F(TestFImdlp, TestIris)
     {
         vector<cutPoints_t> expected = {
-                {5.45f, 5.75f},
-                {2.75f, 2.85f, 2.95f, 3.05f, 3.35f},
-                {2.45f, 4.75f, 5.05f},
-                {0.8f,  1.75f}
+                {4.3, 5.45f, 5.75f, 7.9},
+                {2, 2.75f, 2.85f, 2.95f, 3.05f, 3.35f, 4.4},
+                {1, 2.45f, 4.75f, 5.05f, 6.9},
+                {0.1, 0.8f,  1.75f, 2.5}
         };
         vector<int> depths = { 3, 5, 4, 3 };
         auto test = CPPFImdlp();
@@ -213,7 +221,7 @@ namespace mdlp {
     TEST_F(TestFImdlp, ComputeCutPointsGCase)
     {
         cutPoints_t expected;
-        expected = { 1.5 };
+        expected = { 0, 1.5, 2 };
         samples_t X_ = { 0, 1, 2, 2, 2 };
         labels_t y_ = { 1, 1, 1, 2, 2 };
         fit(X_, y_);
@@ -247,10 +255,10 @@ namespace mdlp {
         // Set max_depth to 1
         auto test = CPPFImdlp(3, 1, 0);
         vector<cutPoints_t> expected = {
-                {5.45f},
-                {3.35f},
-                {2.45f},
-                {0.8f}
+                {4.3, 5.45f, 7.9},
+                {2, 3.35f, 4.4},
+                {1, 2.45f, 6.9},
+                {0.1, 0.8f, 2.5}
         };
         vector<int> depths = { 1, 1, 1, 1 };
         test_dataset(test, "iris", expected, depths);
@@ -261,10 +269,10 @@ namespace mdlp {
         auto test = CPPFImdlp(75, 100, 0);
         // Set min_length to 75
         vector<cutPoints_t> expected = {
-                {5.45f, 5.75f},
-                {2.85f, 3.35f},
-                {2.45f, 4.75f},
-                {0.8f,  1.75f}
+                {4.3, 5.45f, 5.75f, 7.9},
+                {2, 2.85f, 3.35f, 4.4},
+                {1, 2.45f, 4.75f, 6.9},
+                {0.1, 0.8f,  1.75f, 2.5}
         };
         vector<int> depths = { 3, 2, 2, 2 };
         test_dataset(test, "iris", expected, depths);
@@ -275,10 +283,10 @@ namespace mdlp {
         // Set min_length to 75
         auto test = CPPFImdlp(75, 2, 0);
         vector<cutPoints_t> expected = {
-                {5.45f, 5.75f},
-                {2.85f, 3.35f},
-                {2.45f, 4.75f},
-                {0.8f,  1.75f}
+                {4.3, 5.45f, 5.75f, 7.9},
+                {2, 2.85f, 3.35f, 4.4},
+                {1, 2.45f, 4.75f, 6.9},
+                {0.1, 0.8f,  1.75f, 2.5}
         };
         vector<int> depths = { 2, 2, 2, 2 };
         test_dataset(test, "iris", expected, depths);
@@ -289,10 +297,10 @@ namespace mdlp {
         // Set min_length to 75
         auto test = CPPFImdlp(75, 2, 1);
         vector<cutPoints_t> expected = {
-                {5.45f},
-                {2.85f},
-                {2.45f},
-                {0.8f}
+                {4.3, 5.45f, 7.9},
+                {2, 2.85f, 4.4},
+                {1, 2.45f, 6.9},
+                {0.1, 0.8f, 2.5}
         };
         vector<int> depths = { 2, 2, 2, 2 };
         test_dataset(test, "iris", expected, depths);
@@ -304,10 +312,10 @@ namespace mdlp {
         // Set min_length to 75
         auto test = CPPFImdlp(75, 2, 0.2f);
         vector<cutPoints_t> expected = {
-                {5.45f, 5.75f},
-                {2.85f, 3.35f},
-                {2.45f, 4.75f},
-                {0.8f,  1.75f}
+                {4.3, 5.45f, 5.75f, 7.9},
+                {2, 2.85f, 3.35f, 4.4},
+                {1, 2.45f, 4.75f, 6.9},
+                {0.1, 0.8f,  1.75f, 2.5}
         };
         vector<int> depths = { 2, 2, 2, 2 };
         test_dataset(test, "iris", expected, depths);
@@ -327,6 +335,32 @@ namespace mdlp {
             computed = compute_max_num_cut_points();
             ASSERT_EQ(expected, computed);
         }
-
+    }
+    TEST_F(TestFImdlp, TransformTest)
+    {
+        labels_t expected = {
+            5, 3, 4, 4, 5, 5, 5, 5, 2, 4, 5, 5, 3, 3, 5, 5, 5, 5, 5, 5, 5, 5,
+            5, 4, 5, 3, 5, 5, 5, 4, 4, 5, 5, 5, 4, 4, 5, 4, 3, 5, 5, 0, 4, 5,
+            5, 3, 5, 4, 5, 4, 4, 4, 4, 0, 1, 1, 4, 0, 2, 0, 0, 3, 0, 2, 2, 4,
+            3, 0, 0, 0, 4, 1, 0, 1, 2, 3, 1, 3, 2, 0, 0, 0, 0, 0, 3, 5, 4, 0,
+            3, 0, 0, 3, 0, 0, 0, 3, 2, 2, 0, 1, 4, 0, 3, 2, 3, 3, 0, 2, 0, 5,
+            4, 0, 3, 0, 1, 4, 3, 5, 0, 0, 4, 1, 1, 0, 4, 4, 1, 3, 1, 3, 1, 5,
+            1, 1, 0, 3, 5, 4, 3, 4, 4, 4, 0, 4, 4, 3, 0, 3, 5, 3
+        };
+        ArffFiles file;
+        file.load(data_path + "iris.arff", true);
+        vector<samples_t>& X = file.getX();
+        labels_t& y = file.getY();
+        fit(X[1], y);
+        auto computed = transform(X[1]);
+        EXPECT_EQ(computed.size(), expected.size());
+        for (unsigned long i = 0; i < computed.size(); i++) {
+            EXPECT_EQ(computed[i], expected[i]);
+        }
+        auto computed_ft = fit_transform(X[1], y);
+        EXPECT_EQ(computed_ft.size(), expected.size());
+        for (unsigned long i = 0; i < computed_ft.size(); i++) {
+            EXPECT_EQ(computed_ft[i], expected[i]);
+        }
     }
 }

tests/Metrics_unittest.cpp

@@ -1,14 +1,20 @@
+// ****************************************************************
+// SPDX - FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+// SPDX - FileType: SOURCE
+// SPDX - License - Identifier: MIT
+// ****************************************************************
+
 #include "gtest/gtest.h"
-#include "../Metrics.h"
+#include "Metrics.h"
 
 namespace mdlp {
-    class TestMetrics: public Metrics, public testing::Test {
+    class TestMetrics : public Metrics, public testing::Test {
     public:
         labels_t y_ = { 1, 1, 1, 1, 1, 2, 2, 2, 2, 2 };
         indices_t indices_ = { 0, 1, 2, 3, 4, 5, 6, 7, 8, 9 };
-        precision_t precision = 0.000001f;
+        precision_t precision = 1e-6;
 
-        TestMetrics(): Metrics(y_, indices_) {};
+        TestMetrics() : Metrics(y_, indices_) {};
 
         void SetUp() override
         {

tests/datasets/tests.txt

@@ -0,0 +1,222 @@
+#
+# from, to, step, #bins, Q/U
+# discretized data
+# cut points
+#
+#
+# Range experiments
+#
+RANGE
+0, 100, 1, 4, Q
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3
+0.0, 24.75, 49.5, 74.25, 99.0
+RANGE
+0, 50, 1, 4, Q
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3
+0.0, 12.25, 24.5, 36.75, 49.0
+RANGE
+0, 100, 1, 3, Q
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2
+0.0, 33.0, 66.0, 99.0
+RANGE
+0, 50, 1, 3, Q
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2
+0.0, 16.33333, 32.66667, 49.0
+RANGE
+0, 10, 1, 3, Q
+0, 0, 0, 1, 1, 1, 2, 2, 2, 2
+0.0, 3.0, 6.0, 9.0
+RANGE
+0, 100, 1, 4, U
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3
+0.0, 24.75, 49.5, 74.25, 99.0
+RANGE
+0, 50, 1, 4, U
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3
+0.0, 12.25, 24.5, 36.75, 49.0
+RANGE
+0, 100, 1, 3, U
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2
+0.0, 33.0, 66.0, 99.0
+RANGE
+0, 50, 1, 3, U
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2
+0.0, 16.33333, 32.66667, 49.0
+RANGE
+0, 10, 1, 3, U
+0, 0, 0, 1, 1, 1, 2, 2, 2, 2
+0.0, 3.0, 6.0, 9.0
+RANGE
+1, 10, 1, 3, Q
+0, 0, 0, 1, 1, 1, 2, 2, 2
+1.0, 3.66667, 6.33333, 9.0
+RANGE
+1, 10, 1, 3, U
+0, 0, 0, 1, 1, 1, 2, 2, 2
+1.0, 3.66667, 6.33333, 9.0
+RANGE
+1, 11, 1, 3, Q
+0, 0, 0, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.0, 7.0, 10.0
+RANGE
+1, 11, 1, 3, U
+0, 0, 0, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.0, 7.0, 10.0
+RANGE
+1, 12, 1, 3, Q
+0, 0, 0, 0, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.33333, 7.66667, 11.0
+RANGE
+1, 12, 1, 3, U
+0, 0, 0, 0, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.33333, 7.66667, 11.0
+RANGE
+1, 13, 1, 3, Q
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.66667, 8.33333, 12.0
+RANGE
+1, 13, 1, 3, U
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.66667, 8.33333, 12.0
+RANGE
+1, 14, 1, 3, Q
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.0, 9.0, 13.0
+RANGE
+1, 14, 1, 3, U
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.0, 9.0, 13.0
+RANGE
+1, 15, 1, 3, Q
+0, 0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.33333, 9.66667, 14.0
+RANGE
+1, 15, 1, 3, U
+0, 0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.33333, 9.66667, 14.0
+#
+# Vector experiments
+#
+VECTOR
+Q3[3.0, 1.0, 1.0, 3.0, 1.0, 1.0, 3.0, 1.0, 1.0]
+1, 0, 0, 1, 0, 0, 1, 0, 0
+1.0, 1.66667, 3.0
+VECTOR
+U3[3.0, 1.0, 1.0, 3.0, 1.0, 1.0, 3.0, 1.0, 1.0]
+2, 0, 0, 2, 0, 0, 2, 0, 0
+1.0, 1.66667, 2.33333, 3.0
+VECTOR
+Q3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0]
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.66667, 8.33333, 12.0
+VECTOR
+U3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0]
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2
+1.0, 4.66667, 8.33333, 12.0
+VECTOR
+Q3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0]
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.0, 9.0, 13.0
+VECTOR
+U3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0]
+0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.0, 9.0, 13.0
+VECTOR
+Q3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0]
+0, 0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.33333, 9.66667, 14.0
+VECTOR
+U3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0]
+0, 0, 0, 0, 0, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.33333, 9.66667, 14.0
+VECTOR
+Q3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0, 15.0]
+0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.66667, 10.33333, 15.0
+VECTOR
+U3[1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0, 15.0]
+0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2
+1.0, 5.66667, 10.33333, 15.0
+VECTOR
+Q3[15.0, 8.0, 12.0, 14.0, 6.0, 1.0, 13.0, 11.0, 10.0, 9.0, 7.0, 4.0, 3.0, 5.0, 2.0]
+2, 1, 2, 2, 1, 0, 2, 2, 1, 1, 1, 0, 0, 0, 0
+1.0, 5.66667, 10.33333, 15.0
+VECTOR
+U3[15.0, 8.0, 12.0, 14.0, 6.0, 1.0, 13.0, 11.0, 10.0, 9.0, 7.0, 4.0, 3.0, 5.0, 2.0]
+2, 1, 2, 2, 1, 0, 2, 2, 1, 1, 1, 0, 0, 0, 0
+1.0, 5.66667, 10.33333, 15.0
+VECTOR
+Q3[0.0, 1.0, 1.0, 1.0, 2.0, 2.0, 3.0, 3.0, 3.0, 4.0]
+0, 1, 1, 1, 1, 1, 2, 2, 2, 2
+0.0, 1.0, 3.0, 4.0
+VECTOR
+U3[0.0, 1.0, 1.0, 1.0, 2.0, 2.0, 3.0, 3.0, 3.0, 4.0]
+0, 0, 0, 0, 1, 1, 2, 2, 2, 2
+0.0, 1.33333, 2.66667, 4.0
+#
+# Vector experiments with iris
+#
+VECTOR
+Q3[5.1, 4.9, 4.7, 4.6, 5.0, 5.4, 4.6, 5.0, 4.4, 4.9, 5.4, 4.8, 4.8, 4.3, 5.8, 5.7, 5.4, 5.1, 5.7, 5.1, 5.4, 5.1, 4.6, 5.1, 4.8, 5.0, 5.0, 5.2, 5.2, 4.7, 4.8, 5.4, 5.2, 5.5, 4.9, 5.0, 5.5, 4.9, 4.4, 5.1, 5.0, 4.5, 4.4, 5.0, 5.1, 4.8, 5.1, 4.6, 5.3, 5.0, 7.0, 6.4, 6.9, 5.5, 6.5, 5.7, 6.3, 4.9, 6.6, 5.2, 5.0, 5.9, 6.0, 6.1, 5.6, 6.7, 5.6, 5.8, 6.2, 5.6, 5.9, 6.1, 6.3, 6.1, 6.4, 6.6, 6.8, 6.7, 6.0, 5.7, 5.5, 5.5, 5.8, 6.0, 5.4, 6.0, 6.7, 6.3, 5.6, 5.5, 5.5, 6.1, 5.8, 5.0, 5.6, 5.7, 5.7, 6.2, 5.1, 5.7, 6.3, 5.8, 7.1, 6.3, 6.5, 7.6, 4.9, 7.3, 6.7, 7.2, 6.5, 6.4, 6.8, 5.7, 5.8, 6.4, 6.5, 7.7, 7.7, 6.0, 6.9, 5.6, 7.7, 6.3, 6.7, 7.2, 6.2, 6.1, 6.4, 7.2, 7.4, 7.9, 6.4, 6.3, 6.1, 7.7, 6.3, 6.4, 6.0, 6.9, 6.7, 6.9, 5.8, 6.8, 6.7, 6.7, 6.3, 6.5, 6.2, 5.9]
+0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 1, 1, 1, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 2, 2, 2, 1, 2, 1, 2, 0, 2, 0, 0, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 2, 1, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 0, 1, 2, 1, 2, 2, 2, 2, 0, 2, 2, 2, 2, 2, 2, 1, 1, 2, 2, 2, 2, 1, 2, 1, 2, 2, 2, 2, 1, 1, 2, 2, 2, 2, 2, 2, 1, 2, 2, 2, 1, 2, 2, 2, 1, 2, 2, 2, 2, 2, 1, 1
+4.3, 5.4, 6.3, 7.9
+VECTOR
+U3[5.1, 4.9, 4.7, 4.6, 5.0, 5.4, 4.6, 5.0, 4.4, 4.9, 5.4, 4.8, 4.8, 4.3, 5.8, 5.7, 5.4, 5.1, 5.7, 5.1, 5.4, 5.1, 4.6, 5.1, 4.8, 5.0, 5.0, 5.2, 5.2, 4.7, 4.8, 5.4, 5.2, 5.5, 4.9, 5.0, 5.5, 4.9, 4.4, 5.1, 5.0, 4.5, 4.4, 5.0, 5.1, 4.8, 5.1, 4.6, 5.3, 5.0, 7.0, 6.4, 6.9, 5.5, 6.5, 5.7, 6.3, 4.9, 6.6, 5.2, 5.0, 5.9, 6.0, 6.1, 5.6, 6.7, 5.6, 5.8, 6.2, 5.6, 5.9, 6.1, 6.3, 6.1, 6.4, 6.6, 6.8, 6.7, 6.0, 5.7, 5.5, 5.5, 5.8, 6.0, 5.4, 6.0, 6.7, 6.3, 5.6, 5.5, 5.5, 6.1, 5.8, 5.0, 5.6, 5.7, 5.7, 6.2, 5.1, 5.7, 6.3, 5.8, 7.1, 6.3, 6.5, 7.6, 4.9, 7.3, 6.7, 7.2, 6.5, 6.4, 6.8, 5.7, 5.8, 6.4, 6.5, 7.7, 7.7, 6.0, 6.9, 5.6, 7.7, 6.3, 6.7, 7.2, 6.2, 6.1, 6.4, 7.2, 7.4, 7.9, 6.4, 6.3, 6.1, 7.7, 6.3, 6.4, 6.0, 6.9, 6.7, 6.9, 5.8, 6.8, 6.7, 6.7, 6.3, 6.5, 6.2, 5.9]
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 2, 1, 2, 1, 1, 1, 1, 0, 1, 0, 0, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 1, 1, 1, 0, 1, 2, 1, 1, 1, 1, 1, 1, 0, 1, 1, 1, 1, 0, 1, 1, 1, 2, 1, 1, 2, 0, 2, 2, 2, 1, 1, 2, 1, 1, 1, 1, 2, 2, 1, 2, 1, 2, 1, 2, 2, 1, 1, 1, 2, 2, 2, 1, 1, 1, 2, 1, 1, 1, 2, 2, 2, 1, 2, 2, 2, 1, 1, 1, 1
+4.3, 5.5, 6.7, 7.9
+VECTOR
+Q4[5.1, 4.9, 4.7, 4.6, 5.0, 5.4, 4.6, 5.0, 4.4, 4.9, 5.4, 4.8, 4.8, 4.3, 5.8, 5.7, 5.4, 5.1, 5.7, 5.1, 5.4, 5.1, 4.6, 5.1, 4.8, 5.0, 5.0, 5.2, 5.2, 4.7, 4.8, 5.4, 5.2, 5.5, 4.9, 5.0, 5.5, 4.9, 4.4, 5.1, 5.0, 4.5, 4.4, 5.0, 5.1, 4.8, 5.1, 4.6, 5.3, 5.0, 7.0, 6.4, 6.9, 5.5, 6.5, 5.7, 6.3, 4.9, 6.6, 5.2, 5.0, 5.9, 6.0, 6.1, 5.6, 6.7, 5.6, 5.8, 6.2, 5.6, 5.9, 6.1, 6.3, 6.1, 6.4, 6.6, 6.8, 6.7, 6.0, 5.7, 5.5, 5.5, 5.8, 6.0, 5.4, 6.0, 6.7, 6.3, 5.6, 5.5, 5.5, 6.1, 5.8, 5.0, 5.6, 5.7, 5.7, 6.2, 5.1, 5.7, 6.3, 5.8, 7.1, 6.3, 6.5, 7.6, 4.9, 7.3, 6.7, 7.2, 6.5, 6.4, 6.8, 5.7, 5.8, 6.4, 6.5, 7.7, 7.7, 6.0, 6.9, 5.6, 7.7, 6.3, 6.7, 7.2, 6.2, 6.1, 6.4, 7.2, 7.4, 7.9, 6.4, 6.3, 6.1, 7.7, 6.3, 6.4, 6.0, 6.9, 6.7, 6.9, 5.8, 6.8, 6.7, 6.7, 6.3, 6.5, 6.2, 5.9]
+1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 2, 1, 1, 1, 1, 1, 1, 1, 0, 1, 0, 0, 0, 1, 1, 0, 0, 1, 1, 1, 0, 0, 1, 0, 0, 1, 0, 0, 0, 0, 1, 0, 1, 0, 1, 0, 3, 3, 3, 1, 3, 1, 2, 0, 3, 1, 0, 2, 2, 2, 1, 3, 1, 2, 2, 1, 2, 2, 2, 2, 3, 3, 3, 3, 2, 1, 1, 1, 2, 2, 1, 2, 3, 2, 1, 1, 1, 2, 2, 0, 1, 1, 1, 2, 1, 1, 2, 2, 3, 2, 3, 3, 0, 3, 3, 3, 3, 3, 3, 1, 2, 3, 3, 3, 3, 2, 3, 1, 3, 2, 3, 3, 2, 2, 3, 3, 3, 3, 3, 2, 2, 3, 2, 3, 2, 3, 3, 3, 2, 3, 3, 3, 2, 3, 2, 2
+4.3, 5.1, 5.8, 6.4, 7.9
+VECTOR
+U4[5.1, 4.9, 4.7, 4.6, 5.0, 5.4, 4.6, 5.0, 4.4, 4.9, 5.4, 4.8, 4.8, 4.3, 5.8, 5.7, 5.4, 5.1, 5.7, 5.1, 5.4, 5.1, 4.6, 5.1, 4.8, 5.0, 5.0, 5.2, 5.2, 4.7, 4.8, 5.4, 5.2, 5.5, 4.9, 5.0, 5.5, 4.9, 4.4, 5.1, 5.0, 4.5, 4.4, 5.0, 5.1, 4.8, 5.1, 4.6, 5.3, 5.0, 7.0, 6.4, 6.9, 5.5, 6.5, 5.7, 6.3, 4.9, 6.6, 5.2, 5.0, 5.9, 6.0, 6.1, 5.6, 6.7, 5.6, 5.8, 6.2, 5.6, 5.9, 6.1, 6.3, 6.1, 6.4, 6.6, 6.8, 6.7, 6.0, 5.7, 5.5, 5.5, 5.8, 6.0, 5.4, 6.0, 6.7, 6.3, 5.6, 5.5, 5.5, 6.1, 5.8, 5.0, 5.6, 5.7, 5.7, 6.2, 5.1, 5.7, 6.3, 5.8, 7.1, 6.3, 6.5, 7.6, 4.9, 7.3, 6.7, 7.2, 6.5, 6.4, 6.8, 5.7, 5.8, 6.4, 6.5, 7.7, 7.7, 6.0, 6.9, 5.6, 7.7, 6.3, 6.7, 7.2, 6.2, 6.1, 6.4, 7.2, 7.4, 7.9, 6.4, 6.3, 6.1, 7.7, 6.3, 6.4, 6.0, 6.9, 6.7, 6.9, 5.8, 6.8, 6.7, 6.7, 6.3, 6.5, 6.2, 5.9]
+0, 0, 0, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 1, 1, 1, 0, 1, 0, 1, 0, 0, 0, 0, 0, 0, 1, 1, 0, 0, 1, 1, 1, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 0, 3, 2, 2, 1, 2, 1, 2, 0, 2, 1, 0, 1, 1, 2, 1, 2, 1, 1, 2, 1, 1, 2, 2, 2, 2, 2, 2, 2, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 1, 1, 1, 2, 1, 0, 1, 1, 1, 2, 0, 1, 2, 1, 3, 2, 2, 3, 0, 3, 2, 3, 2, 2, 2, 1, 1, 2, 2, 3, 3, 1, 2, 1, 3, 2, 2, 3, 2, 2, 2, 3, 3, 3, 2, 2, 2, 3, 2, 2, 1, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 1
+4.3, 5.2, 6.1, 7.0, 7.9
+VECTOR
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+VECTOR
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+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 2, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2
+0.1, 0.86667, 1.6, 2.5
+VECTOR
+U3[0.2, 0.2, 0.2, 0.2, 0.2, 0.4, 0.3, 0.2, 0.2, 0.1, 0.2, 0.2, 0.1, 0.1, 0.2, 0.4, 0.4, 0.3, 0.3, 0.3, 0.2, 0.4, 0.2, 0.5, 0.2, 0.2, 0.4, 0.2, 0.2, 0.2, 0.2, 0.4, 0.1, 0.2, 0.2, 0.2, 0.2, 0.1, 0.2, 0.2, 0.3, 0.3, 0.2, 0.6, 0.4, 0.3, 0.2, 0.2, 0.2, 0.2, 1.4, 1.5, 1.5, 1.3, 1.5, 1.3, 1.6, 1.0, 1.3, 1.4, 1.0, 1.5, 1.0, 1.4, 1.3, 1.4, 1.5, 1.0, 1.5, 1.1, 1.8, 1.3, 1.5, 1.2, 1.3, 1.4, 1.4, 1.7, 1.5, 1.0, 1.1, 1.0, 1.2, 1.6, 1.5, 1.6, 1.5, 1.3, 1.3, 1.3, 1.2, 1.4, 1.2, 1.0, 1.3, 1.2, 1.3, 1.3, 1.1, 1.3, 2.5, 1.9, 2.1, 1.8, 2.2, 2.1, 1.7, 1.8, 1.8, 2.5, 2.0, 1.9, 2.1, 2.0, 2.4, 2.3, 1.8, 2.2, 2.3, 1.5, 2.3, 2.0, 2.0, 1.8, 2.1, 1.8, 1.8, 1.8, 2.1, 1.6, 1.9, 2.0, 2.2, 1.5, 1.4, 2.3, 2.4, 1.8, 1.8, 2.1, 2.4, 2.3, 1.9, 2.3, 2.5, 2.3, 1.9, 2.0, 2.3, 1.8]
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 2, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 2, 1, 1, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2, 2
+0.1, 0.9, 1.7, 2.5
+VECTOR
+Q4[0.2, 0.2, 0.2, 0.2, 0.2, 0.4, 0.3, 0.2, 0.2, 0.1, 0.2, 0.2, 0.1, 0.1, 0.2, 0.4, 0.4, 0.3, 0.3, 0.3, 0.2, 0.4, 0.2, 0.5, 0.2, 0.2, 0.4, 0.2, 0.2, 0.2, 0.2, 0.4, 0.1, 0.2, 0.2, 0.2, 0.2, 0.1, 0.2, 0.2, 0.3, 0.3, 0.2, 0.6, 0.4, 0.3, 0.2, 0.2, 0.2, 0.2, 1.4, 1.5, 1.5, 1.3, 1.5, 1.3, 1.6, 1.0, 1.3, 1.4, 1.0, 1.5, 1.0, 1.4, 1.3, 1.4, 1.5, 1.0, 1.5, 1.1, 1.8, 1.3, 1.5, 1.2, 1.3, 1.4, 1.4, 1.7, 1.5, 1.0, 1.1, 1.0, 1.2, 1.6, 1.5, 1.6, 1.5, 1.3, 1.3, 1.3, 1.2, 1.4, 1.2, 1.0, 1.3, 1.2, 1.3, 1.3, 1.1, 1.3, 2.5, 1.9, 2.1, 1.8, 2.2, 2.1, 1.7, 1.8, 1.8, 2.5, 2.0, 1.9, 2.1, 2.0, 2.4, 2.3, 1.8, 2.2, 2.3, 1.5, 2.3, 2.0, 2.0, 1.8, 2.1, 1.8, 1.8, 1.8, 2.1, 1.6, 1.9, 2.0, 2.2, 1.5, 1.4, 2.3, 2.4, 1.8, 1.8, 2.1, 2.4, 2.3, 1.9, 2.3, 2.5, 2.3, 1.9, 2.0, 2.3, 1.8]
+0, 0, 0, 0, 0, 1, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 1, 1, 1, 0, 1, 0, 1, 0, 0, 1, 0, 0, 0, 0, 1, 0, 0, 0, 0, 0, 0, 0, 0, 1, 1, 0, 1, 1, 1, 0, 0, 0, 0, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 1, 2, 1, 2, 2, 2, 2, 1, 2, 1, 3, 2, 2, 1, 2, 2, 2, 2, 2, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 1, 2, 1, 1, 2, 1, 2, 2, 1, 2, 3, 3, 3, 3, 3, 3, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2, 3, 3, 3, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3
+0.1, 0.3, 1.3, 1.8, 2.5
+VECTOR
+U4[0.2, 0.2, 0.2, 0.2, 0.2, 0.4, 0.3, 0.2, 0.2, 0.1, 0.2, 0.2, 0.1, 0.1, 0.2, 0.4, 0.4, 0.3, 0.3, 0.3, 0.2, 0.4, 0.2, 0.5, 0.2, 0.2, 0.4, 0.2, 0.2, 0.2, 0.2, 0.4, 0.1, 0.2, 0.2, 0.2, 0.2, 0.1, 0.2, 0.2, 0.3, 0.3, 0.2, 0.6, 0.4, 0.3, 0.2, 0.2, 0.2, 0.2, 1.4, 1.5, 1.5, 1.3, 1.5, 1.3, 1.6, 1.0, 1.3, 1.4, 1.0, 1.5, 1.0, 1.4, 1.3, 1.4, 1.5, 1.0, 1.5, 1.1, 1.8, 1.3, 1.5, 1.2, 1.3, 1.4, 1.4, 1.7, 1.5, 1.0, 1.1, 1.0, 1.2, 1.6, 1.5, 1.6, 1.5, 1.3, 1.3, 1.3, 1.2, 1.4, 1.2, 1.0, 1.3, 1.2, 1.3, 1.3, 1.1, 1.3, 2.5, 1.9, 2.1, 1.8, 2.2, 2.1, 1.7, 1.8, 1.8, 2.5, 2.0, 1.9, 2.1, 2.0, 2.4, 2.3, 1.8, 2.2, 2.3, 1.5, 2.3, 2.0, 2.0, 1.8, 2.1, 1.8, 1.8, 1.8, 2.1, 1.6, 1.9, 2.0, 2.2, 1.5, 1.4, 2.3, 2.4, 1.8, 1.8, 2.1, 2.4, 2.3, 1.9, 2.3, 2.5, 2.3, 1.9, 2.0, 2.3, 1.8]
+0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 0, 2, 2, 2, 2, 2, 2, 2, 1, 2, 2, 1, 2, 1, 2, 2, 2, 2, 1, 2, 1, 2, 2, 2, 1, 2, 2, 2, 2, 2, 1, 1, 1, 1, 2, 2, 2, 2, 2, 2, 2, 1, 2, 1, 1, 2, 1, 2, 2, 1, 2, 3, 3, 3, 2, 3, 3, 2, 2, 2, 3, 3, 3, 3, 3, 3, 3, 2, 3, 3, 2, 3, 3, 3, 2, 3, 2, 2, 2, 3, 2, 3, 3, 3, 2, 2, 3, 3, 2, 2, 3, 3, 3, 3, 3, 3, 3, 3, 3, 3, 2
+0.1, 0.7, 1.3, 1.9, 2.5

tests/test

@@ -1,20 +0,0 @@
-if [ -d build ] ; then
-	rm -fr build
-fi
-if [ -d gcovr-report ] ; then
-	rm -fr gcovr-report
-fi
-cmake -S . -B build -Wno-dev 
-cmake --build build
-cd build
-ctest --output-on-failure
-cd ..
-if [ ! -d gcovr-report ] ; then 
-	mkdir gcovr-report
-fi
-rm -fr gcovr-report/* 2>/dev/null
-#lcov --capture --directory ./ --output-file lcoverage/main_coverage.info
-#lcov --remove lcoverage/main_coverage.info 'v1/*' '/Applications/*' '*/tests/*' --output-file lcoverage/main_coverage.info -q
-#lcov --list lcoverage/main_coverage.info
-cd ..
-gcovr  --gcov-filter "CPPFImdlp.cpp" --gcov-filter "Metrics.cpp" --txt --sonarqube=tests/gcovr-report/coverage.xml   

tests/tests_do.py

@@ -0,0 +1,71 @@
+# ***************************************************************
+# SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+# SPDX-FileType: SOURCE
+# SPDX-License-Identifier: MIT
+# ***************************************************************
+
+import json
+from sklearn.preprocessing import KBinsDiscretizer
+
+with open("datasets/tests.txt") as f:
+    data = f.readlines()
+
+data = [x.strip() for x in data if x[0] != "#"]
+
+errors = False
+for i in range(0, len(data), 4):
+    experiment_type = data[i]
+    print("Experiment:", data[i + 1])
+    if experiment_type == "RANGE":
+        range_data = data[i + 1]
+        from_, to_, step_, n_bins_, strategy_ = range_data.split(",")
+        X = [[float(x)] for x in range(int(from_), int(to_), int(step_))]
+    else:
+        strategy_ = data[i + 1][0]
+        n_bins_ = data[i + 1][1]
+        vector = data[i + 1][2:]
+        X = [[float(x)] for x in json.loads(vector)]
+
+    strategy = "quantile" if strategy_.strip() == "Q" else "uniform"
+    disc = KBinsDiscretizer(
+        n_bins=int(n_bins_),
+        encode="ordinal",
+        strategy=strategy,
+    )
+    expected_data = data[i + 2]
+    cuts_data = data[i + 3]
+    disc.fit(X)
+    #
+    # Normalize the cutpoints to remove numerical errors such as 33.0000000001
+    # instead of 33
+    #
+    for j in range(len(disc.bin_edges_[0])):
+        disc.bin_edges_[0][j] = round(disc.bin_edges_[0][j], 5)
+    result = disc.transform(X)
+    result = [int(x) for x in result.flatten()]
+    expected = [int(x) for x in expected_data.split(",")]
+    #
+    # Check the Results
+    #
+    assert len(result) == len(expected)
+    for j in range(len(result)):
+        if result[j] != expected[j]:
+            print("* Error at", j, "Expected=", expected[j], "Result=", result[j])
+            errors = True
+    expected_cuts = disc.bin_edges_[0]
+    computed_cuts = [float(x) for x in cuts_data.split(",")]
+    assert len(expected_cuts) == len(computed_cuts)
+    for j in range(len(expected_cuts)):
+        if round(expected_cuts[j], 5) != computed_cuts[j]:
+            print(
+                "* Error at",
+                j,
+                "Expected=",
+                expected_cuts[j],
+                "Result=",
+                computed_cuts[j],
+            )
+            errors = True
+if errors:
+    raise Exception("There were errors!")
+print("*** All tests run succesfully! ***")

tests/tests_generate.ipynb

@@ -0,0 +1,209 @@
+{
+ "cells": [
+  {
+   "cell_type": "code",
+   "execution_count": 1,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "from sklearn.preprocessing import KBinsDiscretizer\n",
+    "from sklearn.datasets import load_iris"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 2,
+   "metadata": {},
+   "outputs": [],
+   "source": [
+    "experiments_range = [\n",
+    "    [0, 100, 1, 4, \"Q\"],\n",
+    "    [0, 50, 1, 4, \"Q\"],\n",
+    "    [0, 100, 1, 3, \"Q\"],\n",
+    "    [0, 50, 1, 3, \"Q\"],\n",
+    "    [0, 10, 1, 3, \"Q\"],\n",
+    "    [0, 100, 1, 4, \"U\"],\n",
+    "    [0, 50, 1, 4, \"U\"],\n",
+    "    [0, 100, 1, 3, \"U\"],\n",
+    "    [0, 50, 1, 3, \"U\"],\n",
+    "# \n",
+    "    [0, 10, 1, 3, \"U\"],\n",
+    "    [1, 10, 1, 3, \"Q\"],\n",
+    "    [1, 10, 1, 3, \"U\"],\n",
+    "    [1, 11, 1, 3, \"Q\"],\n",
+    "    [1, 11, 1, 3, \"U\"],\n",
+    "    [1, 12, 1, 3, \"Q\"],\n",
+    "    [1, 12, 1, 3, \"U\"],\n",
+    "    [1, 13, 1, 3, \"Q\"],\n",
+    "    [1, 13, 1, 3, \"U\"],\n",
+    "    [1, 14, 1, 3, \"Q\"],\n",
+    "    [1, 14, 1, 3, \"U\"],\n",
+    "    [1, 15, 1, 3, \"Q\"],\n",
+    "    [1, 15, 1, 3, \"U\"]\n",
+    "]\n",
+    "experiments_vectors = [\n",
+    "    (3, [3.0, 1.0, 1.0, 3.0, 1.0, 1.0, 3.0, 1.0, 1.0]),\n",
+    "    (3, [1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0]),\n",
+    "    (3, [1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0]),\n",
+    "    (3, [1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0]),\n",
+    "    (3, [1.0, 2.0, 3.0, 4.0, 5.0, 6.0, 7.0, 8.0, 9.0, 10.0, 11.0, 12.0, 13.0, 14.0, 15.0]),\n",
+    "    (3, [15.0, 8.0, 12.0, 14.0, 6.0, 1.0, 13.0, 11.0, 10.0, 9.0, 7.0, 4.0, 3.0, 5.0, 2.0]),\n",
+    "    (3, [0.0, 1.0, 1.0, 1.0, 2.0, 2.0, 3.0, 3.0, 3.0, 4.0])\n",
+    "]"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 3,
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stderr",
+     "output_type": "stream",
+     "text": [
+      "/home/rmontanana/miniconda3/lib/python3.11/site-packages/sklearn/preprocessing/_discretization.py:307: UserWarning: Bins whose width are too small (i.e., <= 1e-8) in feature 0 are removed. Consider decreasing the number of bins.\n",
+      "  warnings.warn(\n"
+     ]
+    }
+   ],
+   "source": [
+    "def write_lists(file, data, cuts):\n",
+    "    sep = \"\"\n",
+    "    for res in data:\n",
+    "        file.write(f\"{sep}{int(res):d}\")\n",
+    "        sep= \", \"\n",
+    "    file.write(\"\\n\")\n",
+    "    sep = \"\"\n",
+    "    for res in cuts:\n",
+    "        file.write(sep + str(round(res,5)))\n",
+    "        sep = \", \"\n",
+    "    file.write(\"\\n\")\n",
+    "\n",
+    "def normalize_cuts(cuts):\n",
+    "    #\n",
+    "    # Normalize the cutpoints to remove numerical errors such as 33.0000000001\n",
+    "    # instead of 33\n",
+    "    #\n",
+    "    for k in range(cuts.shape[0]):\n",
+    "        for i in range(len(cuts[k])):\n",
+    "            cuts[k][i] = round(cuts[k][i], 5)\n",
+    "\n",
+    "with open(\"datasets/tests.txt\", \"w\") as file:\n",
+    "    file.write(\"#\\n\")\n",
+    "    file.write(\"# from, to, step, #bins, Q/U\\n\")\n",
+    "    file.write(\"# discretized data\\n\")\n",
+    "    file.write(\"# cut points\\n\")\n",
+    "    file.write(\"#\\n\")\n",
+    "    #\n",
+    "    # Range experiments\n",
+    "    #\n",
+    "    file.write(\"#\\n\")\n",
+    "    file.write(\"# Range experiments\\n\")\n",
+    "    file.write(\"#\\n\")\n",
+    "    for experiment in experiments_range:\n",
+    "        file.write(\"RANGE\\n\")\n",
+    "        (from_, to_, step_, bins_, strategy) = experiment\n",
+    "        disc = KBinsDiscretizer(n_bins=bins_, encode='ordinal', strategy='quantile' if strategy.strip() == \"Q\" else 'uniform')\n",
+    "        data = [[x] for x in range(from_, to_, step_)]\n",
+    "        disc.fit(data)\n",
+    "        normalize_cuts(disc.bin_edges_)\n",
+    "        result = disc.transform(data)\n",
+    "        file.write(f\"{from_}, {to_}, {step_}, {bins_}, {strategy}\\n\")\n",
+    "        write_lists(file, result, disc.bin_edges_[0])\n",
+    "    #\n",
+    "    # Vector experiments\n",
+    "    #\n",
+    "    file.write(\"#\\n\")\n",
+    "    file.write(\"# Vector experiments\\n\")\n",
+    "    file.write(\"#\\n\")\n",
+    "    for n_bins, experiment in experiments_vectors:\n",
+    "        for strategy in [\"Q\", \"U\"]:\n",
+    "            file.write(\"VECTOR\\n\")\n",
+    "            file.write(f\"{strategy}{n_bins}{experiment}\\n\")\n",
+    "            disc = KBinsDiscretizer(\n",
+    "                n_bins=n_bins,\n",
+    "                encode=\"ordinal\",\n",
+    "                \n",
+    "                strategy=\"quantile\" if strategy.strip() == \"Q\" else \"uniform\",\n",
+    "            )\n",
+    "            data = [[x] for x in experiment]\n",
+    "            disc.fit(data)\n",
+    "            normalize_cuts(disc.bin_edges_)\n",
+    "            result = disc.transform(data)\n",
+    "            write_lists(file, result, disc.bin_edges_[0])\n",
+    "    #\n",
+    "    # Vector experiments iris\n",
+    "    #\n",
+    "    file.write(\"#\\n\");\n",
+    "    file.write(\"# Vector experiments with iris\\n\");\n",
+    "    file.write(\"#\\n\");\n",
+    "    X, y = load_iris(return_X_y=True)\n",
+    "    for i in range(X.shape[1]):\n",
+    "        for n_bins in [3, 4]:\n",
+    "            for strategy in [\"Q\", \"U\"]:\n",
+    "                file.write(\"VECTOR\\n\")\n",
+    "                experiment = X[:, i]\n",
+    "                file.write(f\"{strategy}{n_bins}{experiment.tolist()}\\n\")\n",
+    "                disc = KBinsDiscretizer(\n",
+    "                    n_bins=n_bins,\n",
+    "                    encode=\"ordinal\",\n",
+    "                    strategy=\"quantile\" if strategy.strip() == \"Q\" else \"uniform\")\n",
+    "                data = [[x] for x in experiment]\n",
+    "                disc.fit(data)\n",
+    "                normalize_cuts(disc.bin_edges_)\n",
+    "                result = disc.transform(data)\n",
+    "                write_lists(file, result, disc.bin_edges_[0])"
+   ]
+  },
+  {
+   "cell_type": "code",
+   "execution_count": 4,
+   "metadata": {},
+   "outputs": [
+    {
+     "name": "stdout",
+     "output_type": "stream",
+     "text": [
+      "Cut points:  [array([ 0., 33., 66., 99.])]\n",
+      "Mistaken transformed data disc.transform([[33]]) = [[0.]]\n",
+      "Reason of the mistake the cutpoint has decimals (double):  33.00000000000001\n"
+     ]
+    }
+   ],
+   "source": [
+    "#\n",
+    "# Proving the mistakes due to floating point precision\n",
+    "#\n",
+    "from sklearn.preprocessing import KBinsDiscretizer\n",
+    "\n",
+    "data = [[x] for x in range(100)]\n",
+    "disc = KBinsDiscretizer(n_bins=3, encode=\"ordinal\", strategy=\"quantile\")\n",
+    "disc.fit(data)\n",
+    "print(\"Cut points: \", disc.bin_edges_)\n",
+    "print(\"Mistaken transformed data disc.transform([[33]]) =\", disc.transform([[33]]))\n",
+    "print(\"Reason of the mistake the cutpoint has decimals (double): \", disc.bin_edges_[0][1])"
+   ]
+  }
+ ],
+ "metadata": {
+  "kernelspec": {
+   "display_name": "base",
+   "language": "python",
+   "name": "python3"
+  },
+  "language_info": {
+   "codemirror_mode": {
+    "name": "ipython",
+    "version": 3
+   },
+   "file_extension": ".py",
+   "mimetype": "text/x-python",
+   "name": "python",
+   "nbconvert_exporter": "python",
+   "pygments_lexer": "ipython3",
+   "version": "3.1.undefined"
+  }
+ },
+ "nbformat": 4,
+ "nbformat_minor": 2
+}

typesFImdlp.h

@@ -1,18 +0,0 @@
-#ifndef TYPES_H
-#define TYPES_H
-
-#include <vector>
-#include <map>
-#include <stdexcept>
-
-using namespace std;
-namespace mdlp {
-    typedef float precision_t;
-    typedef vector<precision_t> samples_t;
-    typedef vector<int> labels_t;
-    typedef vector<size_t> indices_t;
-    typedef vector<precision_t> cutPoints_t;
-    typedef map<pair<int, int>, precision_t> cacheEnt_t;
-    typedef map<tuple<int, int, int>, precision_t> cacheIg_t;
-}
-#endif

update_coverage.py

@@ -0,0 +1,38 @@
+# ***************************************************************
+# SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
+# SPDX-FileType: SOURCE
+# SPDX-License-Identifier: MIT
+# ***************************************************************
+
+import subprocess
+import sys
+
+readme_file = "README.md"
+print("Updating coverage...")
+# Generate badge line
+output = subprocess.check_output(
+    "lcov --summary " + sys.argv[1] + "/coverage.info",
+    shell=True,
+)
+value = output.decode("utf-8").strip()
+percentage = 0
+for line in value.splitlines():
+    if "lines" in line:
+        percentage = float(line.split(":")[1].split("%")[0])
+        break
+print(f"Coverage: {percentage}%")
+if percentage < 90:
+    print("⛔Coverage is less than 90%. I won't update the badge.")
+    sys.exit(1)
+percentage_label = str(percentage).replace(".", ",")
+coverage_line = f"[![Coverage Badge](https://img.shields.io/badge/Coverage-{percentage_label}%25-green)](html/index.html)"
+# Update README.md
+with open(readme_file, "r") as f:
+    lines = f.readlines()
+with open(readme_file, "w") as f:
+    for line in lines:
+        if "img.shields.io/badge/Coverage" in line:
+            f.write(coverage_line + "\n")
+        else:
+            f.write(line)
+print(f"✅Coverage updated with value: {percentage}")