Add command results to b_list
Rename tostring -> toString in models Add datasets names to b_main command help - validation
This commit is contained in:
@@ -85,13 +85,13 @@ int main(int argc, char** argv)
|
|||||||
.default_value(std::string{ PATH }
|
.default_value(std::string{ PATH }
|
||||||
);
|
);
|
||||||
program.add_argument("-m", "--model")
|
program.add_argument("-m", "--model")
|
||||||
.help("Model to use " + platform::Models::instance()->tostring())
|
.help("Model to use " + platform::Models::instance()->toString())
|
||||||
.action([](const std::string& value) {
|
.action([](const std::string& value) {
|
||||||
static const std::vector<std::string> choices = platform::Models::instance()->getNames();
|
static const std::vector<std::string> choices = platform::Models::instance()->getNames();
|
||||||
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
||||||
return value;
|
return value;
|
||||||
}
|
}
|
||||||
throw runtime_error("Model must be one of " + platform::Models::instance()->tostring());
|
throw runtime_error("Model must be one of " + platform::Models::instance()->toString());
|
||||||
}
|
}
|
||||||
);
|
);
|
||||||
program.add_argument("--discretize").help("Discretize input dataset").default_value(false).implicit_value(true);
|
program.add_argument("--discretize").help("Discretize input dataset").default_value(false).implicit_value(true);
|
||||||
|
@@ -20,8 +20,8 @@ set(best_sources b_best.cc BestResults.cc Statistics.cc BestResultsExcel.cc)
|
|||||||
list(TRANSFORM best_sources PREPEND best/)
|
list(TRANSFORM best_sources PREPEND best/)
|
||||||
add_executable(
|
add_executable(
|
||||||
b_best ${best_sources} main/Result.cc
|
b_best ${best_sources} main/Result.cc
|
||||||
reports/ReportExcel.cc reports/ReportBase.cc reports/ExcelFile.cc common/Datasets.cc common/Dataset.cc)
|
reports/ReportExcel.cc reports/ReportBase.cc reports/ExcelFile.cc common/Datasets.cc common/Dataset.cc main/Models.cc)
|
||||||
target_link_libraries(b_best Boost::boost "${TORCH_LIBRARIES}" "${XLSXWRITER_LIB}" ArffFiles mdlp)
|
target_link_libraries(b_best Boost::boost "${PyClassifiers}" "${BayesNet}" ArffFiles mdlp ${Python3_LIBRARIES} "${TORCH_LIBRARIES}" ${LIBTORCH_PYTHON} Boost::python Boost::numpy "${XLSXWRITER_LIB}")
|
||||||
|
|
||||||
# b_grid
|
# b_grid
|
||||||
set(grid_sources b_grid.cc GridSearch.cc GridData.cc)
|
set(grid_sources b_grid.cc GridSearch.cc GridData.cc)
|
||||||
|
@@ -126,4 +126,14 @@ namespace platform {
|
|||||||
{
|
{
|
||||||
return datasets.find(name) != datasets.end();
|
return datasets.find(name) != datasets.end();
|
||||||
}
|
}
|
||||||
|
std::string Datasets::toString() const
|
||||||
|
{
|
||||||
|
std::string result;
|
||||||
|
std::string sep = "";
|
||||||
|
for (const auto& d : datasets) {
|
||||||
|
result += sep + d.first;
|
||||||
|
sep = ", ";
|
||||||
|
}
|
||||||
|
return "{" + result + "}";
|
||||||
|
}
|
||||||
}
|
}
|
@@ -24,6 +24,7 @@ namespace platform {
|
|||||||
std::pair<torch::Tensor&, torch::Tensor&> getTensors(const std::string& name);
|
std::pair<torch::Tensor&, torch::Tensor&> getTensors(const std::string& name);
|
||||||
bool isDataset(const std::string& name) const;
|
bool isDataset(const std::string& name) const;
|
||||||
void loadDataset(const std::string& name) const;
|
void loadDataset(const std::string& name) const;
|
||||||
|
std::string toString() const;
|
||||||
};
|
};
|
||||||
};
|
};
|
||||||
|
|
||||||
|
@@ -20,14 +20,14 @@ void assignModel(argparse::ArgumentParser& parser)
|
|||||||
{
|
{
|
||||||
auto models = platform::Models::instance();
|
auto models = platform::Models::instance();
|
||||||
parser.add_argument("-m", "--model")
|
parser.add_argument("-m", "--model")
|
||||||
.help("Model to use " + models->tostring())
|
.help("Model to use " + models->toString())
|
||||||
.required()
|
.required()
|
||||||
.action([models](const std::string& value) {
|
.action([models](const std::string& value) {
|
||||||
static const std::vector<std::string> choices = models->getNames();
|
static const std::vector<std::string> choices = models->getNames();
|
||||||
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
||||||
return value;
|
return value;
|
||||||
}
|
}
|
||||||
throw std::runtime_error("Model must be one of " + models->tostring());
|
throw std::runtime_error("Model must be one of " + models->toString());
|
||||||
}
|
}
|
||||||
);
|
);
|
||||||
}
|
}
|
||||||
@@ -259,7 +259,7 @@ int main(int argc, char** argv)
|
|||||||
}
|
}
|
||||||
}
|
}
|
||||||
if (!found) {
|
if (!found) {
|
||||||
throw std::runtime_error("You must specify one of the following commands: dump, report, compute, export\n");
|
throw std::runtime_error("You must specify one of the following commands: dump, report, compute\n");
|
||||||
}
|
}
|
||||||
}
|
}
|
||||||
catch (const exception& err) {
|
catch (const exception& err) {
|
||||||
|
@@ -1,5 +1,6 @@
|
|||||||
#include <iostream>
|
#include <iostream>
|
||||||
#include <locale>
|
#include <locale>
|
||||||
|
#include <map>
|
||||||
#include <argparse/argparse.hpp>
|
#include <argparse/argparse.hpp>
|
||||||
#include <nlohmann/json.hpp>
|
#include <nlohmann/json.hpp>
|
||||||
#include "common/Paths.h"
|
#include "common/Paths.h"
|
||||||
@@ -28,15 +29,9 @@ std::string outputBalance(const std::string& balance)
|
|||||||
return temp;
|
return temp;
|
||||||
}
|
}
|
||||||
|
|
||||||
int main(int argc, char** argv)
|
void list_datasets(argparse::ArgumentParser& program)
|
||||||
{
|
{
|
||||||
auto datasets = platform::Datasets(false, platform::Paths::datasets());
|
auto datasets = platform::Datasets(false, platform::Paths::datasets());
|
||||||
argparse::ArgumentParser program("b_list", { platform_project_version.begin(), platform_project_version.end() });
|
|
||||||
program.add_argument("--excel")
|
|
||||||
.help("Output in Excel format")
|
|
||||||
.default_value(false)
|
|
||||||
.implicit_value(true);
|
|
||||||
program.parse_args(argc, argv);
|
|
||||||
auto excel = program.get<bool>("--excel");
|
auto excel = program.get<bool>("--excel");
|
||||||
locale mylocale(std::cout.getloc(), new separated);
|
locale mylocale(std::cout.getloc(), new separated);
|
||||||
locale::global(mylocale);
|
locale::global(mylocale);
|
||||||
@@ -70,11 +65,72 @@ int main(int argc, char** argv)
|
|||||||
data[dataset]["classes"] = datasets.getNClasses(dataset);
|
data[dataset]["classes"] = datasets.getNClasses(dataset);
|
||||||
data[dataset]["balance"] = oss.str();
|
data[dataset]["balance"] = oss.str();
|
||||||
}
|
}
|
||||||
std::cout << Colors::RESET() << std::endl;
|
|
||||||
if (excel) {
|
if (excel) {
|
||||||
auto report = platform::DatasetsExcel();
|
auto report = platform::DatasetsExcel();
|
||||||
report.report(data);
|
report.report(data);
|
||||||
std::cout << "Output saved in " << report.getFileName() << std::endl;
|
std::cout << std::endl << Colors::GREEN() << "Output saved in " << report.getFileName() << std::endl;
|
||||||
}
|
}
|
||||||
return 0;
|
|
||||||
}
|
}
|
||||||
|
|
||||||
|
void list_results(argparse::ArgumentParser& program)
|
||||||
|
{
|
||||||
|
std::cout << "Results" << std::endl;
|
||||||
|
}
|
||||||
|
|
||||||
|
int main(int argc, char** argv)
|
||||||
|
{
|
||||||
|
argparse::ArgumentParser program("b_list", { platform_project_version.begin(), platform_project_version.end() });
|
||||||
|
//
|
||||||
|
// datasets subparser
|
||||||
|
//
|
||||||
|
argparse::ArgumentParser datasets_command("datasets");
|
||||||
|
datasets_command.add_description("List datasets available in the platform.");
|
||||||
|
datasets_command.add_argument("--excel")
|
||||||
|
.help("Output in Excel format")
|
||||||
|
.default_value(false)
|
||||||
|
.implicit_value(true);
|
||||||
|
//
|
||||||
|
// results subparser
|
||||||
|
//
|
||||||
|
argparse::ArgumentParser results_command("results");
|
||||||
|
results_command.add_description("List the results of a given dataset.");
|
||||||
|
auto datasets = platform::Datasets(false, platform::Paths::datasets());
|
||||||
|
results_command.add_argument("-d", "--dataset")
|
||||||
|
.help("Dataset to use " + datasets.toString())
|
||||||
|
.required()
|
||||||
|
.action([](const std::string& value) {
|
||||||
|
auto datasets = platform::Datasets(false, platform::Paths::datasets());
|
||||||
|
static const std::vector<std::string> choices = datasets.getNames();
|
||||||
|
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
||||||
|
return value;
|
||||||
|
}
|
||||||
|
throw std::runtime_error("Dataset must be one of " + datasets.toString());
|
||||||
|
}
|
||||||
|
);
|
||||||
|
// Add subparsers
|
||||||
|
program.add_subparser(datasets_command);
|
||||||
|
program.add_subparser(results_command);
|
||||||
|
// Parse command line and execute
|
||||||
|
try {
|
||||||
|
program.parse_args(argc, argv);
|
||||||
|
bool found = false;
|
||||||
|
map<std::string, void(*)(argparse::ArgumentParser&)> commands = { {"datasets", &list_datasets}, {"results", &list_results} };
|
||||||
|
for (const auto& command : commands) {
|
||||||
|
if (program.is_subcommand_used(command.first)) {
|
||||||
|
std::invoke(command.second, program.at<argparse::ArgumentParser>(command.first));
|
||||||
|
found = true;
|
||||||
|
break;
|
||||||
|
}
|
||||||
|
}
|
||||||
|
if (!found) {
|
||||||
|
throw std::runtime_error("You must specify one of the following commands: datasets, results\n");
|
||||||
|
}
|
||||||
|
}
|
||||||
|
catch (const exception& err) {
|
||||||
|
cerr << err.what() << std::endl;
|
||||||
|
cerr << program;
|
||||||
|
exit(1);
|
||||||
|
}
|
||||||
|
std::cout << Colors::RESET() << std::endl;
|
||||||
|
return 0;
|
||||||
|
}
|
@@ -36,13 +36,15 @@ namespace platform {
|
|||||||
[](const pair<std::string, function<bayesnet::BaseClassifier* (void)>>& pair) { return pair.first; });
|
[](const pair<std::string, function<bayesnet::BaseClassifier* (void)>>& pair) { return pair.first; });
|
||||||
return names;
|
return names;
|
||||||
}
|
}
|
||||||
std::string Models::tostring()
|
std::string Models::toString()
|
||||||
{
|
{
|
||||||
std::string result = "";
|
std::string result = "";
|
||||||
|
std::string sep = "";
|
||||||
for (const auto& pair : functionRegistry) {
|
for (const auto& pair : functionRegistry) {
|
||||||
result += pair.first + ", ";
|
result += sep + pair.first;
|
||||||
|
sep = ", ";
|
||||||
}
|
}
|
||||||
return "{" + result.substr(0, result.size() - 2) + "}";
|
return "{" + result + "}";
|
||||||
}
|
}
|
||||||
Registrar::Registrar(const std::string& name, function<bayesnet::BaseClassifier* (void)> classFactoryFunction)
|
Registrar::Registrar(const std::string& name, function<bayesnet::BaseClassifier* (void)> classFactoryFunction)
|
||||||
{
|
{
|
||||||
|
@@ -31,7 +31,7 @@ namespace platform {
|
|||||||
void registerFactoryFunction(const std::string& name,
|
void registerFactoryFunction(const std::string& name,
|
||||||
function<bayesnet::BaseClassifier* (void)> classFactoryFunction);
|
function<bayesnet::BaseClassifier* (void)> classFactoryFunction);
|
||||||
std::vector<string> getNames();
|
std::vector<string> getNames();
|
||||||
std::string tostring();
|
std::string toString();
|
||||||
|
|
||||||
};
|
};
|
||||||
class Registrar {
|
class Registrar {
|
||||||
|
@@ -15,18 +15,29 @@ using json = nlohmann::json;
|
|||||||
void manageArguments(argparse::ArgumentParser& program)
|
void manageArguments(argparse::ArgumentParser& program)
|
||||||
{
|
{
|
||||||
auto env = platform::DotEnv();
|
auto env = platform::DotEnv();
|
||||||
program.add_argument("-d", "--dataset").default_value("").help("Dataset file name");
|
auto datasets = platform::Datasets(false, platform::Paths::datasets());
|
||||||
|
program.add_argument("-d", "--dataset")
|
||||||
|
.help("Dataset file name: " + datasets.toString())
|
||||||
|
.action([](const std::string& value) {
|
||||||
|
auto datasets = platform::Datasets(false, platform::Paths::datasets());
|
||||||
|
static const std::vector<std::string> choices_datasets(datasets.getNames());
|
||||||
|
if (find(choices_datasets.begin(), choices_datasets.end(), value) != choices_datasets.end()) {
|
||||||
|
return value;
|
||||||
|
}
|
||||||
|
throw std::runtime_error("Dataset must be one of: " + datasets.toString());
|
||||||
|
}
|
||||||
|
);
|
||||||
program.add_argument("--hyperparameters").default_value("{}").help("Hyperparameters passed to the model in Experiment");
|
program.add_argument("--hyperparameters").default_value("{}").help("Hyperparameters passed to the model in Experiment");
|
||||||
program.add_argument("--hyper-file").default_value("").help("Hyperparameters file name." \
|
program.add_argument("--hyper-file").default_value("").help("Hyperparameters file name." \
|
||||||
"Mutually exclusive with hyperparameters. This file should contain hyperparameters for each dataset in json format.");
|
"Mutually exclusive with hyperparameters. This file should contain hyperparameters for each dataset in json format.");
|
||||||
program.add_argument("-m", "--model")
|
program.add_argument("-m", "--model")
|
||||||
.help("Model to use " + platform::Models::instance()->tostring())
|
.help("Model to use: " + platform::Models::instance()->toString())
|
||||||
.action([](const std::string& value) {
|
.action([](const std::string& value) {
|
||||||
static const std::vector<std::string> choices = platform::Models::instance()->getNames();
|
static const std::vector<std::string> choices = platform::Models::instance()->getNames();
|
||||||
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
if (find(choices.begin(), choices.end(), value) != choices.end()) {
|
||||||
return value;
|
return value;
|
||||||
}
|
}
|
||||||
throw std::runtime_error("Model must be one of " + platform::Models::instance()->tostring());
|
throw std::runtime_error("Model must be one of " + platform::Models::instance()->toString());
|
||||||
}
|
}
|
||||||
);
|
);
|
||||||
program.add_argument("--title").default_value("").help("Experiment title");
|
program.add_argument("--title").default_value("").help("Experiment title");
|
||||||
|
Reference in New Issue
Block a user