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28
.gitignore
vendored
28
.gitignore
vendored
@@ -37,4 +37,30 @@ build_*/**
|
||||
cmake-build*/**
|
||||
.idea
|
||||
puml/**
|
||||
.vscode/settings.json
|
||||
.vscode/settings.json
|
||||
|
||||
# CMake generated files
|
||||
CMakeFiles/
|
||||
CMakeCache.txt
|
||||
cmake_install.cmake
|
||||
compile_commands.json
|
||||
Makefile
|
||||
CTestTestfile.cmake
|
||||
DartConfiguration.tcl
|
||||
Testing/
|
||||
CMakePresets.json
|
||||
|
||||
# Conan generated files
|
||||
conan_toolchain.cmake
|
||||
conan*.sh
|
||||
deactivate_*.sh
|
||||
cmakedeps*.cmake
|
||||
conandeps*.cmake
|
||||
*-Target-*.cmake
|
||||
*-debug-*.cmake
|
||||
*Config*.cmake
|
||||
*Targets.cmake
|
||||
Find*.cmake
|
||||
module-*.cmake
|
||||
CMakeUserPresets.json
|
||||
.claude
|
||||
|
||||
6
.gitmodules
vendored
6
.gitmodules
vendored
@@ -1,6 +0,0 @@
|
||||
[submodule "tests/lib/Catch2"]
|
||||
path = tests/lib/Catch2
|
||||
url = https://github.com/catchorg/Catch2.git
|
||||
[submodule "tests/lib/mdlp"]
|
||||
path = tests/lib/mdlp
|
||||
url = https://github.com/rmontanana/mdlp
|
||||
11
CHANGELOG.md
11
CHANGELOG.md
@@ -5,6 +5,17 @@ All notable changes to this project will be documented in this file.
|
||||
The format is based on [Keep a Changelog](https://keepachangelog.com/en/1.1.0/),
|
||||
and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0.html).
|
||||
|
||||
## [1.1.2] 2025-07-19
|
||||
|
||||
### Changed
|
||||
|
||||
- Update cmake and make build and conan integration
|
||||
- Remove CMakeUserPresets
|
||||
- Add libtorch 2.7.1 dependency
|
||||
- Fix conan package version
|
||||
- Add conan integration for dependency management
|
||||
- Remove git submodules
|
||||
|
||||
## [1.1.1] 2024-12-13
|
||||
|
||||
- Added a new parameter `quiet` to enable/disable the warning messages in the Stratified K-Fold partitioning. Default value `true`.
|
||||
|
||||
@@ -1,6 +1,7 @@
|
||||
cmake_minimum_required(VERSION 3.20)
|
||||
|
||||
project(Folding
|
||||
VERSION 1.1.2
|
||||
DESCRIPTION "Folding utility for BayesNet library"
|
||||
HOMEPAGE_URL "https://github.com/rmontanana/folding"
|
||||
LANGUAGES CXX
|
||||
@@ -23,25 +24,75 @@ SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pthread")
|
||||
|
||||
# Options
|
||||
# -------
|
||||
option(ENABLE_TESTING "Unit testing build" OFF)
|
||||
|
||||
# CMakes modules
|
||||
# --------------
|
||||
set(CMAKE_MODULE_PATH ${CMAKE_CURRENT_SOURCE_DIR}/cmake/modules ${CMAKE_MODULE_PATH})
|
||||
include(AddGitSubmodule)
|
||||
option(ENABLE_TESTING "Unit testing build" OFF)
|
||||
|
||||
# Subdirectories
|
||||
# --------------
|
||||
add_subdirectory(config)
|
||||
|
||||
# Testing
|
||||
# -------
|
||||
if (ENABLE_TESTING)
|
||||
MESSAGE("Testing enabled")
|
||||
add_git_submodule("tests/lib/Catch2")
|
||||
add_git_submodule("tests/lib/Files")
|
||||
add_git_submodule("tests/lib/mdlp")
|
||||
find_package(Catch2 REQUIRED)
|
||||
find_package(arff-files REQUIRED)
|
||||
find_package(fimdlp REQUIRED)
|
||||
include(CTest)
|
||||
add_subdirectory(tests)
|
||||
endif (ENABLE_TESTING)
|
||||
|
||||
# Library
|
||||
# --------
|
||||
add_library(folding INTERFACE folding.hpp)
|
||||
|
||||
target_include_directories(folding INTERFACE
|
||||
$<BUILD_INTERFACE:${CMAKE_CURRENT_SOURCE_DIR}>
|
||||
$<BUILD_INTERFACE:${CMAKE_CURRENT_BINARY_DIR}/configured_files/include>
|
||||
$<INSTALL_INTERFACE:include>
|
||||
)
|
||||
|
||||
# Install
|
||||
# -------
|
||||
install(TARGETS folding EXPORT FoldingTargets
|
||||
INCLUDES DESTINATION include
|
||||
)
|
||||
install(EXPORT FoldingTargets
|
||||
FILE FoldingTargets.cmake
|
||||
NAMESPACE Folding::
|
||||
DESTINATION lib/cmake/Folding
|
||||
)
|
||||
|
||||
# Install the main header file
|
||||
install(FILES folding.hpp
|
||||
DESTINATION include
|
||||
)
|
||||
|
||||
# Install the generated configuration header
|
||||
install(FILES "${CMAKE_CURRENT_BINARY_DIR}/configured_files/include/folding_config.h"
|
||||
DESTINATION include
|
||||
)
|
||||
|
||||
# Install documentation files
|
||||
install(FILES LICENSE README.md
|
||||
DESTINATION share/doc/Folding
|
||||
)
|
||||
|
||||
# Create and install package configuration files
|
||||
include(CMakePackageConfigHelpers)
|
||||
write_basic_package_version_file(
|
||||
"${CMAKE_CURRENT_BINARY_DIR}/FoldingConfigVersion.cmake"
|
||||
VERSION ${PROJECT_VERSION}
|
||||
COMPATIBILITY AnyNewerVersion
|
||||
)
|
||||
|
||||
configure_package_config_file(
|
||||
"${CMAKE_CURRENT_SOURCE_DIR}/cmake/FoldingConfig.cmake.in"
|
||||
"${CMAKE_CURRENT_BINARY_DIR}/FoldingConfig.cmake"
|
||||
INSTALL_DESTINATION lib/cmake/Folding
|
||||
)
|
||||
|
||||
install(FILES
|
||||
"${CMAKE_CURRENT_BINARY_DIR}/FoldingConfig.cmake"
|
||||
"${CMAKE_CURRENT_BINARY_DIR}/FoldingConfigVersion.cmake"
|
||||
DESTINATION lib/cmake/Folding
|
||||
)
|
||||
|
||||
13
Makefile
13
Makefile
@@ -26,16 +26,25 @@ clean: ## Clean the tests info
|
||||
|
||||
build: ## Build a debug version of the project
|
||||
@echo ">>> Building Debug Folding...";
|
||||
@if [ -d ./$(f_debug) ]; then rm -rf ./$(f_debug); fi
|
||||
@if [ -d $(f_debug) ]; then rm -rf $(f_debug); fi
|
||||
@mkdir $(f_debug);
|
||||
@cmake -S . -B $(f_debug) -D CMAKE_BUILD_TYPE=Debug -D ENABLE_TESTING=ON
|
||||
conan install . -of $(f_debug) -s build_type=Debug -b missing
|
||||
cmake -B $(f_debug) -S . -DCMAKE_BUILD_TYPE=Debug -DCMAKE_TOOLCHAIN_FILE=$(f_debug)/conan_toolchain.cmake -DENABLE_TESTING=ON
|
||||
cmake --build $(f_debug) -t $(test_targets) $(n_procs)
|
||||
@echo ">>> Done";
|
||||
|
||||
conan-create: ## Create the conan package
|
||||
@echo ">>> Creating the conan package..."
|
||||
conan create . --build=missing -tf "" -s:a build_type=Release
|
||||
conan create . --build=missing -tf "" -s:a build_type=Debug
|
||||
@echo ">>> Done"
|
||||
|
||||
opt = ""
|
||||
test: ## Run tests (opt="-s") to verbose output the tests
|
||||
@echo ">>> Running Folding tests...";
|
||||
@$(MAKE) clean
|
||||
@cmake --build $(f_debug) -t $(test_targets) $(n_procs)
|
||||
@cp -r tests/data $(f_debug)/tests/data
|
||||
@for t in $(test_targets); do \
|
||||
if [ -f $(f_debug)/tests/$$t ]; then \
|
||||
cd $(f_debug)/tests ; \
|
||||
|
||||
@@ -1,9 +1,10 @@
|
||||
# <img src="logo.png" alt="logo" width="50"/> Folding
|
||||
|
||||
|
||||
|
||||
[](<https://opensource.org/licenses/MIT>)
|
||||
|
||||
|
||||
|
||||
|
||||
|
||||
K-Fold and stratified K-Fold header-only library for BayesNet classifiers & platform
|
||||
|
||||
|
||||
5
cmake/FoldingConfig.cmake.in
Normal file
5
cmake/FoldingConfig.cmake.in
Normal file
@@ -0,0 +1,5 @@
|
||||
@PACKAGE_INIT@
|
||||
|
||||
include("${CMAKE_CURRENT_LIST_DIR}/FoldingTargets.cmake")
|
||||
|
||||
check_required_components(Folding)
|
||||
@@ -1,12 +0,0 @@
|
||||
|
||||
function(add_git_submodule dir)
|
||||
find_package(Git REQUIRED)
|
||||
|
||||
if(NOT EXISTS ${dir}/CMakeLists.txt)
|
||||
message(STATUS "🚨 Adding git submodule => ${dir}")
|
||||
execute_process(COMMAND ${GIT_EXECUTABLE}
|
||||
submodule update --init --recursive -- ${dir}
|
||||
WORKING_DIRECTORY ${PROJECT_SOURCE_DIR})
|
||||
endif()
|
||||
add_subdirectory(${dir})
|
||||
endfunction(add_git_submodule)
|
||||
@@ -1,742 +0,0 @@
|
||||
# Copyright (c) 2012 - 2017, Lars Bilke
|
||||
# All rights reserved.
|
||||
#
|
||||
# Redistribution and use in source and binary forms, with or without modification,
|
||||
# are permitted provided that the following conditions are met:
|
||||
#
|
||||
# 1. Redistributions of source code must retain the above copyright notice, this
|
||||
# list of conditions and the following disclaimer.
|
||||
#
|
||||
# 2. Redistributions in binary form must reproduce the above copyright notice,
|
||||
# this list of conditions and the following disclaimer in the documentation
|
||||
# and/or other materials provided with the distribution.
|
||||
#
|
||||
# 3. Neither the name of the copyright holder nor the names of its contributors
|
||||
# may be used to endorse or promote products derived from this software without
|
||||
# specific prior written permission.
|
||||
#
|
||||
# THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
|
||||
# ANY EXPRESS OR IMPLIED WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED
|
||||
# WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
|
||||
# DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE FOR
|
||||
# ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL DAMAGES
|
||||
# (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR SERVICES;
|
||||
# LOSS OF USE, DATA, OR PROFITS; OR BUSINESS INTERRUPTION) HOWEVER CAUSED AND ON
|
||||
# ANY THEORY OF LIABILITY, WHETHER IN CONTRACT, STRICT LIABILITY, OR TORT
|
||||
# (INCLUDING NEGLIGENCE OR OTHERWISE) ARISING IN ANY WAY OUT OF THE USE OF THIS
|
||||
# SOFTWARE, EVEN IF ADVISED OF THE POSSIBILITY OF SUCH DAMAGE.
|
||||
#
|
||||
# CHANGES:
|
||||
#
|
||||
# 2012-01-31, Lars Bilke
|
||||
# - Enable Code Coverage
|
||||
#
|
||||
# 2013-09-17, Joakim Söderberg
|
||||
# - Added support for Clang.
|
||||
# - Some additional usage instructions.
|
||||
#
|
||||
# 2016-02-03, Lars Bilke
|
||||
# - Refactored functions to use named parameters
|
||||
#
|
||||
# 2017-06-02, Lars Bilke
|
||||
# - Merged with modified version from github.com/ufz/ogs
|
||||
#
|
||||
# 2019-05-06, Anatolii Kurotych
|
||||
# - Remove unnecessary --coverage flag
|
||||
#
|
||||
# 2019-12-13, FeRD (Frank Dana)
|
||||
# - Deprecate COVERAGE_LCOVR_EXCLUDES and COVERAGE_GCOVR_EXCLUDES lists in favor
|
||||
# of tool-agnostic COVERAGE_EXCLUDES variable, or EXCLUDE setup arguments.
|
||||
# - CMake 3.4+: All excludes can be specified relative to BASE_DIRECTORY
|
||||
# - All setup functions: accept BASE_DIRECTORY, EXCLUDE list
|
||||
# - Set lcov basedir with -b argument
|
||||
# - Add automatic --demangle-cpp in lcovr, if 'c++filt' is available (can be
|
||||
# overridden with NO_DEMANGLE option in setup_target_for_coverage_lcovr().)
|
||||
# - Delete output dir, .info file on 'make clean'
|
||||
# - Remove Python detection, since version mismatches will break gcovr
|
||||
# - Minor cleanup (lowercase function names, update examples...)
|
||||
#
|
||||
# 2019-12-19, FeRD (Frank Dana)
|
||||
# - Rename Lcov outputs, make filtered file canonical, fix cleanup for targets
|
||||
#
|
||||
# 2020-01-19, Bob Apthorpe
|
||||
# - Added gfortran support
|
||||
#
|
||||
# 2020-02-17, FeRD (Frank Dana)
|
||||
# - Make all add_custom_target()s VERBATIM to auto-escape wildcard characters
|
||||
# in EXCLUDEs, and remove manual escaping from gcovr targets
|
||||
#
|
||||
# 2021-01-19, Robin Mueller
|
||||
# - Add CODE_COVERAGE_VERBOSE option which will allow to print out commands which are run
|
||||
# - Added the option for users to set the GCOVR_ADDITIONAL_ARGS variable to supply additional
|
||||
# flags to the gcovr command
|
||||
#
|
||||
# 2020-05-04, Mihchael Davis
|
||||
# - Add -fprofile-abs-path to make gcno files contain absolute paths
|
||||
# - Fix BASE_DIRECTORY not working when defined
|
||||
# - Change BYPRODUCT from folder to index.html to stop ninja from complaining about double defines
|
||||
#
|
||||
# 2021-05-10, Martin Stump
|
||||
# - Check if the generator is multi-config before warning about non-Debug builds
|
||||
#
|
||||
# 2022-02-22, Marko Wehle
|
||||
# - Change gcovr output from -o <filename> for --xml <filename> and --html <filename> output respectively.
|
||||
# This will allow for Multiple Output Formats at the same time by making use of GCOVR_ADDITIONAL_ARGS, e.g. GCOVR_ADDITIONAL_ARGS "--txt".
|
||||
#
|
||||
# 2022-09-28, Sebastian Mueller
|
||||
# - fix append_coverage_compiler_flags_to_target to correctly add flags
|
||||
# - replace "-fprofile-arcs -ftest-coverage" with "--coverage" (equivalent)
|
||||
#
|
||||
# USAGE:
|
||||
#
|
||||
# 1. Copy this file into your cmake modules path.
|
||||
#
|
||||
# 2. Add the following line to your CMakeLists.txt (best inside an if-condition
|
||||
# using a CMake option() to enable it just optionally):
|
||||
# include(CodeCoverage)
|
||||
#
|
||||
# 3. Append necessary compiler flags for all supported source files:
|
||||
# append_coverage_compiler_flags()
|
||||
# Or for specific target:
|
||||
# append_coverage_compiler_flags_to_target(YOUR_TARGET_NAME)
|
||||
#
|
||||
# 3.a (OPTIONAL) Set appropriate optimization flags, e.g. -O0, -O1 or -Og
|
||||
#
|
||||
# 4. If you need to exclude additional directories from the report, specify them
|
||||
# using full paths in the COVERAGE_EXCLUDES variable before calling
|
||||
# setup_target_for_coverage_*().
|
||||
# Example:
|
||||
# set(COVERAGE_EXCLUDES
|
||||
# '${PROJECT_SOURCE_DIR}/src/dir1/*'
|
||||
# '/path/to/my/src/dir2/*')
|
||||
# Or, use the EXCLUDE argument to setup_target_for_coverage_*().
|
||||
# Example:
|
||||
# setup_target_for_coverage_lcov(
|
||||
# NAME coverage
|
||||
# EXECUTABLE testrunner
|
||||
# EXCLUDE "${PROJECT_SOURCE_DIR}/src/dir1/*" "/path/to/my/src/dir2/*")
|
||||
#
|
||||
# 4.a NOTE: With CMake 3.4+, COVERAGE_EXCLUDES or EXCLUDE can also be set
|
||||
# relative to the BASE_DIRECTORY (default: PROJECT_SOURCE_DIR)
|
||||
# Example:
|
||||
# set(COVERAGE_EXCLUDES "dir1/*")
|
||||
# setup_target_for_coverage_gcovr_html(
|
||||
# NAME coverage
|
||||
# EXECUTABLE testrunner
|
||||
# BASE_DIRECTORY "${PROJECT_SOURCE_DIR}/src"
|
||||
# EXCLUDE "dir2/*")
|
||||
#
|
||||
# 5. Use the functions described below to create a custom make target which
|
||||
# runs your test executable and produces a code coverage report.
|
||||
#
|
||||
# 6. Build a Debug build:
|
||||
# cmake -DCMAKE_BUILD_TYPE=Debug ..
|
||||
# make
|
||||
# make my_coverage_target
|
||||
#
|
||||
|
||||
include(CMakeParseArguments)
|
||||
|
||||
option(CODE_COVERAGE_VERBOSE "Verbose information" FALSE)
|
||||
|
||||
# Check prereqs
|
||||
find_program( GCOV_PATH gcov )
|
||||
find_program( LCOV_PATH NAMES lcov lcov.bat lcov.exe lcov.perl)
|
||||
find_program( FASTCOV_PATH NAMES fastcov fastcov.py )
|
||||
find_program( GENHTML_PATH NAMES genhtml genhtml.perl genhtml.bat )
|
||||
find_program( GCOVR_PATH gcovr PATHS ${CMAKE_SOURCE_DIR}/scripts/test)
|
||||
find_program( CPPFILT_PATH NAMES c++filt )
|
||||
|
||||
if(NOT GCOV_PATH)
|
||||
message(FATAL_ERROR "gcov not found! Aborting...")
|
||||
endif() # NOT GCOV_PATH
|
||||
|
||||
# Check supported compiler (Clang, GNU and Flang)
|
||||
get_property(LANGUAGES GLOBAL PROPERTY ENABLED_LANGUAGES)
|
||||
foreach(LANG ${LANGUAGES})
|
||||
if("${CMAKE_${LANG}_COMPILER_ID}" MATCHES "(Apple)?[Cc]lang")
|
||||
if("${CMAKE_${LANG}_COMPILER_VERSION}" VERSION_LESS 3)
|
||||
message(FATAL_ERROR "Clang version must be 3.0.0 or greater! Aborting...")
|
||||
endif()
|
||||
elseif(NOT "${CMAKE_${LANG}_COMPILER_ID}" MATCHES "GNU"
|
||||
AND NOT "${CMAKE_${LANG}_COMPILER_ID}" MATCHES "(LLVM)?[Ff]lang")
|
||||
message(FATAL_ERROR "Compiler is not GNU or Flang! Aborting...")
|
||||
endif()
|
||||
endforeach()
|
||||
|
||||
set(COVERAGE_COMPILER_FLAGS "-g --coverage"
|
||||
CACHE INTERNAL "")
|
||||
if(CMAKE_CXX_COMPILER_ID MATCHES "(GNU|Clang)")
|
||||
include(CheckCXXCompilerFlag)
|
||||
check_cxx_compiler_flag(-fprofile-abs-path HAVE_fprofile_abs_path)
|
||||
if(HAVE_fprofile_abs_path)
|
||||
set(COVERAGE_COMPILER_FLAGS "${COVERAGE_COMPILER_FLAGS} -fprofile-abs-path")
|
||||
endif()
|
||||
endif()
|
||||
|
||||
set(CMAKE_Fortran_FLAGS_COVERAGE
|
||||
${COVERAGE_COMPILER_FLAGS}
|
||||
CACHE STRING "Flags used by the Fortran compiler during coverage builds."
|
||||
FORCE )
|
||||
set(CMAKE_CXX_FLAGS_COVERAGE
|
||||
${COVERAGE_COMPILER_FLAGS}
|
||||
CACHE STRING "Flags used by the C++ compiler during coverage builds."
|
||||
FORCE )
|
||||
set(CMAKE_C_FLAGS_COVERAGE
|
||||
${COVERAGE_COMPILER_FLAGS}
|
||||
CACHE STRING "Flags used by the C compiler during coverage builds."
|
||||
FORCE )
|
||||
set(CMAKE_EXE_LINKER_FLAGS_COVERAGE
|
||||
""
|
||||
CACHE STRING "Flags used for linking binaries during coverage builds."
|
||||
FORCE )
|
||||
set(CMAKE_SHARED_LINKER_FLAGS_COVERAGE
|
||||
""
|
||||
CACHE STRING "Flags used by the shared libraries linker during coverage builds."
|
||||
FORCE )
|
||||
mark_as_advanced(
|
||||
CMAKE_Fortran_FLAGS_COVERAGE
|
||||
CMAKE_CXX_FLAGS_COVERAGE
|
||||
CMAKE_C_FLAGS_COVERAGE
|
||||
CMAKE_EXE_LINKER_FLAGS_COVERAGE
|
||||
CMAKE_SHARED_LINKER_FLAGS_COVERAGE )
|
||||
|
||||
get_property(GENERATOR_IS_MULTI_CONFIG GLOBAL PROPERTY GENERATOR_IS_MULTI_CONFIG)
|
||||
if(NOT (CMAKE_BUILD_TYPE STREQUAL "Debug" OR GENERATOR_IS_MULTI_CONFIG))
|
||||
message(WARNING "Code coverage results with an optimised (non-Debug) build may be misleading")
|
||||
endif() # NOT (CMAKE_BUILD_TYPE STREQUAL "Debug" OR GENERATOR_IS_MULTI_CONFIG)
|
||||
|
||||
if(CMAKE_C_COMPILER_ID STREQUAL "GNU" OR CMAKE_Fortran_COMPILER_ID STREQUAL "GNU")
|
||||
link_libraries(gcov)
|
||||
endif()
|
||||
|
||||
# Defines a target for running and collection code coverage information
|
||||
# Builds dependencies, runs the given executable and outputs reports.
|
||||
# NOTE! The executable should always have a ZERO as exit code otherwise
|
||||
# the coverage generation will not complete.
|
||||
#
|
||||
# setup_target_for_coverage_lcov(
|
||||
# NAME testrunner_coverage # New target name
|
||||
# EXECUTABLE testrunner -j ${PROCESSOR_COUNT} # Executable in PROJECT_BINARY_DIR
|
||||
# DEPENDENCIES testrunner # Dependencies to build first
|
||||
# BASE_DIRECTORY "../" # Base directory for report
|
||||
# # (defaults to PROJECT_SOURCE_DIR)
|
||||
# EXCLUDE "src/dir1/*" "src/dir2/*" # Patterns to exclude (can be relative
|
||||
# # to BASE_DIRECTORY, with CMake 3.4+)
|
||||
# NO_DEMANGLE # Don't demangle C++ symbols
|
||||
# # even if c++filt is found
|
||||
# )
|
||||
function(setup_target_for_coverage_lcov)
|
||||
|
||||
set(options NO_DEMANGLE SONARQUBE)
|
||||
set(oneValueArgs BASE_DIRECTORY NAME)
|
||||
set(multiValueArgs EXCLUDE EXECUTABLE EXECUTABLE_ARGS DEPENDENCIES LCOV_ARGS GENHTML_ARGS)
|
||||
cmake_parse_arguments(Coverage "${options}" "${oneValueArgs}" "${multiValueArgs}" ${ARGN})
|
||||
|
||||
if(NOT LCOV_PATH)
|
||||
message(FATAL_ERROR "lcov not found! Aborting...")
|
||||
endif() # NOT LCOV_PATH
|
||||
|
||||
if(NOT GENHTML_PATH)
|
||||
message(FATAL_ERROR "genhtml not found! Aborting...")
|
||||
endif() # NOT GENHTML_PATH
|
||||
|
||||
# Set base directory (as absolute path), or default to PROJECT_SOURCE_DIR
|
||||
if(DEFINED Coverage_BASE_DIRECTORY)
|
||||
get_filename_component(BASEDIR ${Coverage_BASE_DIRECTORY} ABSOLUTE)
|
||||
else()
|
||||
set(BASEDIR ${PROJECT_SOURCE_DIR})
|
||||
endif()
|
||||
|
||||
# Collect excludes (CMake 3.4+: Also compute absolute paths)
|
||||
set(LCOV_EXCLUDES "")
|
||||
foreach(EXCLUDE ${Coverage_EXCLUDE} ${COVERAGE_EXCLUDES} ${COVERAGE_LCOV_EXCLUDES})
|
||||
if(CMAKE_VERSION VERSION_GREATER 3.4)
|
||||
get_filename_component(EXCLUDE ${EXCLUDE} ABSOLUTE BASE_DIR ${BASEDIR})
|
||||
endif()
|
||||
list(APPEND LCOV_EXCLUDES "${EXCLUDE}")
|
||||
endforeach()
|
||||
list(REMOVE_DUPLICATES LCOV_EXCLUDES)
|
||||
|
||||
# Conditional arguments
|
||||
if(CPPFILT_PATH AND NOT ${Coverage_NO_DEMANGLE})
|
||||
set(GENHTML_EXTRA_ARGS "--demangle-cpp")
|
||||
endif()
|
||||
|
||||
# Setting up commands which will be run to generate coverage data.
|
||||
# Cleanup lcov
|
||||
set(LCOV_CLEAN_CMD
|
||||
${LCOV_PATH} ${Coverage_LCOV_ARGS} --gcov-tool ${GCOV_PATH} -directory .
|
||||
-b ${BASEDIR} --zerocounters
|
||||
)
|
||||
# Create baseline to make sure untouched files show up in the report
|
||||
set(LCOV_BASELINE_CMD
|
||||
${LCOV_PATH} ${Coverage_LCOV_ARGS} --gcov-tool ${GCOV_PATH} -c -i -d . -b
|
||||
${BASEDIR} -o ${Coverage_NAME}.base
|
||||
)
|
||||
# Run tests
|
||||
set(LCOV_EXEC_TESTS_CMD
|
||||
${Coverage_EXECUTABLE} ${Coverage_EXECUTABLE_ARGS}
|
||||
)
|
||||
# Capturing lcov counters and generating report
|
||||
set(LCOV_CAPTURE_CMD
|
||||
${LCOV_PATH} ${Coverage_LCOV_ARGS} --gcov-tool ${GCOV_PATH} --directory . -b
|
||||
${BASEDIR} --capture --output-file ${Coverage_NAME}.capture
|
||||
)
|
||||
# add baseline counters
|
||||
set(LCOV_BASELINE_COUNT_CMD
|
||||
${LCOV_PATH} ${Coverage_LCOV_ARGS} --gcov-tool ${GCOV_PATH} -a ${Coverage_NAME}.base
|
||||
-a ${Coverage_NAME}.capture --output-file ${Coverage_NAME}.total
|
||||
)
|
||||
# filter collected data to final coverage report
|
||||
set(LCOV_FILTER_CMD
|
||||
${LCOV_PATH} ${Coverage_LCOV_ARGS} --gcov-tool ${GCOV_PATH} --remove
|
||||
${Coverage_NAME}.total ${LCOV_EXCLUDES} --output-file ${Coverage_NAME}.info
|
||||
)
|
||||
# Generate HTML output
|
||||
set(LCOV_GEN_HTML_CMD
|
||||
${GENHTML_PATH} ${GENHTML_EXTRA_ARGS} ${Coverage_GENHTML_ARGS} -o
|
||||
${Coverage_NAME} ${Coverage_NAME}.info
|
||||
)
|
||||
if(${Coverage_SONARQUBE})
|
||||
# Generate SonarQube output
|
||||
set(GCOVR_XML_CMD
|
||||
${GCOVR_PATH} --sonarqube ${Coverage_NAME}_sonarqube.xml -r ${BASEDIR} ${GCOVR_ADDITIONAL_ARGS}
|
||||
${GCOVR_EXCLUDE_ARGS} --object-directory=${PROJECT_BINARY_DIR}
|
||||
)
|
||||
set(GCOVR_XML_CMD_COMMAND
|
||||
COMMAND ${GCOVR_XML_CMD}
|
||||
)
|
||||
set(GCOVR_XML_CMD_BYPRODUCTS ${Coverage_NAME}_sonarqube.xml)
|
||||
set(GCOVR_XML_CMD_COMMENT COMMENT "SonarQube code coverage info report saved in ${Coverage_NAME}_sonarqube.xml.")
|
||||
endif()
|
||||
|
||||
|
||||
if(CODE_COVERAGE_VERBOSE)
|
||||
message(STATUS "Executed command report")
|
||||
message(STATUS "Command to clean up lcov: ")
|
||||
string(REPLACE ";" " " LCOV_CLEAN_CMD_SPACED "${LCOV_CLEAN_CMD}")
|
||||
message(STATUS "${LCOV_CLEAN_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to create baseline: ")
|
||||
string(REPLACE ";" " " LCOV_BASELINE_CMD_SPACED "${LCOV_BASELINE_CMD}")
|
||||
message(STATUS "${LCOV_BASELINE_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to run the tests: ")
|
||||
string(REPLACE ";" " " LCOV_EXEC_TESTS_CMD_SPACED "${LCOV_EXEC_TESTS_CMD}")
|
||||
message(STATUS "${LCOV_EXEC_TESTS_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to capture counters and generate report: ")
|
||||
string(REPLACE ";" " " LCOV_CAPTURE_CMD_SPACED "${LCOV_CAPTURE_CMD}")
|
||||
message(STATUS "${LCOV_CAPTURE_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to add baseline counters: ")
|
||||
string(REPLACE ";" " " LCOV_BASELINE_COUNT_CMD_SPACED "${LCOV_BASELINE_COUNT_CMD}")
|
||||
message(STATUS "${LCOV_BASELINE_COUNT_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to filter collected data: ")
|
||||
string(REPLACE ";" " " LCOV_FILTER_CMD_SPACED "${LCOV_FILTER_CMD}")
|
||||
message(STATUS "${LCOV_FILTER_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to generate lcov HTML output: ")
|
||||
string(REPLACE ";" " " LCOV_GEN_HTML_CMD_SPACED "${LCOV_GEN_HTML_CMD}")
|
||||
message(STATUS "${LCOV_GEN_HTML_CMD_SPACED}")
|
||||
|
||||
if(${Coverage_SONARQUBE})
|
||||
message(STATUS "Command to generate SonarQube XML output: ")
|
||||
string(REPLACE ";" " " GCOVR_XML_CMD_SPACED "${GCOVR_XML_CMD}")
|
||||
message(STATUS "${GCOVR_XML_CMD_SPACED}")
|
||||
endif()
|
||||
endif()
|
||||
|
||||
# Setup target
|
||||
add_custom_target(${Coverage_NAME}
|
||||
COMMAND ${LCOV_CLEAN_CMD}
|
||||
COMMAND ${LCOV_BASELINE_CMD}
|
||||
COMMAND ${LCOV_EXEC_TESTS_CMD}
|
||||
COMMAND ${LCOV_CAPTURE_CMD}
|
||||
COMMAND ${LCOV_BASELINE_COUNT_CMD}
|
||||
COMMAND ${LCOV_FILTER_CMD}
|
||||
COMMAND ${LCOV_GEN_HTML_CMD}
|
||||
${GCOVR_XML_CMD_COMMAND}
|
||||
|
||||
# Set output files as GENERATED (will be removed on 'make clean')
|
||||
BYPRODUCTS
|
||||
${Coverage_NAME}.base
|
||||
${Coverage_NAME}.capture
|
||||
${Coverage_NAME}.total
|
||||
${Coverage_NAME}.info
|
||||
${GCOVR_XML_CMD_BYPRODUCTS}
|
||||
${Coverage_NAME}/index.html
|
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
|
||||
DEPENDS ${Coverage_DEPENDENCIES}
|
||||
VERBATIM # Protect arguments to commands
|
||||
COMMENT "Resetting code coverage counters to zero.\nProcessing code coverage counters and generating report."
|
||||
)
|
||||
|
||||
# Show where to find the lcov info report
|
||||
add_custom_command(TARGET ${Coverage_NAME} POST_BUILD
|
||||
COMMAND ;
|
||||
COMMENT "Lcov code coverage info report saved in ${Coverage_NAME}.info."
|
||||
${GCOVR_XML_CMD_COMMENT}
|
||||
)
|
||||
|
||||
# Show info where to find the report
|
||||
add_custom_command(TARGET ${Coverage_NAME} POST_BUILD
|
||||
COMMAND ;
|
||||
COMMENT "Open ./${Coverage_NAME}/index.html in your browser to view the coverage report."
|
||||
)
|
||||
|
||||
endfunction() # setup_target_for_coverage_lcov
|
||||
|
||||
# Defines a target for running and collection code coverage information
|
||||
# Builds dependencies, runs the given executable and outputs reports.
|
||||
# NOTE! The executable should always have a ZERO as exit code otherwise
|
||||
# the coverage generation will not complete.
|
||||
#
|
||||
# setup_target_for_coverage_gcovr_xml(
|
||||
# NAME ctest_coverage # New target name
|
||||
# EXECUTABLE ctest -j ${PROCESSOR_COUNT} # Executable in PROJECT_BINARY_DIR
|
||||
# DEPENDENCIES executable_target # Dependencies to build first
|
||||
# BASE_DIRECTORY "../" # Base directory for report
|
||||
# # (defaults to PROJECT_SOURCE_DIR)
|
||||
# EXCLUDE "src/dir1/*" "src/dir2/*" # Patterns to exclude (can be relative
|
||||
# # to BASE_DIRECTORY, with CMake 3.4+)
|
||||
# )
|
||||
# The user can set the variable GCOVR_ADDITIONAL_ARGS to supply additional flags to the
|
||||
# GCVOR command.
|
||||
function(setup_target_for_coverage_gcovr_xml)
|
||||
|
||||
set(options NONE)
|
||||
set(oneValueArgs BASE_DIRECTORY NAME)
|
||||
set(multiValueArgs EXCLUDE EXECUTABLE EXECUTABLE_ARGS DEPENDENCIES)
|
||||
cmake_parse_arguments(Coverage "${options}" "${oneValueArgs}" "${multiValueArgs}" ${ARGN})
|
||||
|
||||
if(NOT GCOVR_PATH)
|
||||
message(FATAL_ERROR "gcovr not found! Aborting...")
|
||||
endif() # NOT GCOVR_PATH
|
||||
|
||||
# Set base directory (as absolute path), or default to PROJECT_SOURCE_DIR
|
||||
if(DEFINED Coverage_BASE_DIRECTORY)
|
||||
get_filename_component(BASEDIR ${Coverage_BASE_DIRECTORY} ABSOLUTE)
|
||||
else()
|
||||
set(BASEDIR ${PROJECT_SOURCE_DIR})
|
||||
endif()
|
||||
|
||||
# Collect excludes (CMake 3.4+: Also compute absolute paths)
|
||||
set(GCOVR_EXCLUDES "")
|
||||
foreach(EXCLUDE ${Coverage_EXCLUDE} ${COVERAGE_EXCLUDES} ${COVERAGE_GCOVR_EXCLUDES})
|
||||
if(CMAKE_VERSION VERSION_GREATER 3.4)
|
||||
get_filename_component(EXCLUDE ${EXCLUDE} ABSOLUTE BASE_DIR ${BASEDIR})
|
||||
endif()
|
||||
list(APPEND GCOVR_EXCLUDES "${EXCLUDE}")
|
||||
endforeach()
|
||||
list(REMOVE_DUPLICATES GCOVR_EXCLUDES)
|
||||
|
||||
# Combine excludes to several -e arguments
|
||||
set(GCOVR_EXCLUDE_ARGS "")
|
||||
foreach(EXCLUDE ${GCOVR_EXCLUDES})
|
||||
list(APPEND GCOVR_EXCLUDE_ARGS "-e")
|
||||
list(APPEND GCOVR_EXCLUDE_ARGS "${EXCLUDE}")
|
||||
endforeach()
|
||||
|
||||
# Set up commands which will be run to generate coverage data
|
||||
# Run tests
|
||||
set(GCOVR_XML_EXEC_TESTS_CMD
|
||||
${Coverage_EXECUTABLE} ${Coverage_EXECUTABLE_ARGS}
|
||||
)
|
||||
# Running gcovr
|
||||
set(GCOVR_XML_CMD
|
||||
${GCOVR_PATH} --xml ${Coverage_NAME}.xml -r ${BASEDIR} ${GCOVR_ADDITIONAL_ARGS}
|
||||
${GCOVR_EXCLUDE_ARGS} --object-directory=${PROJECT_BINARY_DIR}
|
||||
)
|
||||
|
||||
if(CODE_COVERAGE_VERBOSE)
|
||||
message(STATUS "Executed command report")
|
||||
|
||||
message(STATUS "Command to run tests: ")
|
||||
string(REPLACE ";" " " GCOVR_XML_EXEC_TESTS_CMD_SPACED "${GCOVR_XML_EXEC_TESTS_CMD}")
|
||||
message(STATUS "${GCOVR_XML_EXEC_TESTS_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to generate gcovr XML coverage data: ")
|
||||
string(REPLACE ";" " " GCOVR_XML_CMD_SPACED "${GCOVR_XML_CMD}")
|
||||
message(STATUS "${GCOVR_XML_CMD_SPACED}")
|
||||
endif()
|
||||
|
||||
add_custom_target(${Coverage_NAME}
|
||||
COMMAND ${GCOVR_XML_EXEC_TESTS_CMD}
|
||||
COMMAND ${GCOVR_XML_CMD}
|
||||
|
||||
BYPRODUCTS ${Coverage_NAME}.xml
|
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
|
||||
DEPENDS ${Coverage_DEPENDENCIES}
|
||||
VERBATIM # Protect arguments to commands
|
||||
COMMENT "Running gcovr to produce Cobertura code coverage report."
|
||||
)
|
||||
|
||||
# Show info where to find the report
|
||||
add_custom_command(TARGET ${Coverage_NAME} POST_BUILD
|
||||
COMMAND ;
|
||||
COMMENT "Cobertura code coverage report saved in ${Coverage_NAME}.xml."
|
||||
)
|
||||
endfunction() # setup_target_for_coverage_gcovr_xml
|
||||
|
||||
# Defines a target for running and collection code coverage information
|
||||
# Builds dependencies, runs the given executable and outputs reports.
|
||||
# NOTE! The executable should always have a ZERO as exit code otherwise
|
||||
# the coverage generation will not complete.
|
||||
#
|
||||
# setup_target_for_coverage_gcovr_html(
|
||||
# NAME ctest_coverage # New target name
|
||||
# EXECUTABLE ctest -j ${PROCESSOR_COUNT} # Executable in PROJECT_BINARY_DIR
|
||||
# DEPENDENCIES executable_target # Dependencies to build first
|
||||
# BASE_DIRECTORY "../" # Base directory for report
|
||||
# # (defaults to PROJECT_SOURCE_DIR)
|
||||
# EXCLUDE "src/dir1/*" "src/dir2/*" # Patterns to exclude (can be relative
|
||||
# # to BASE_DIRECTORY, with CMake 3.4+)
|
||||
# )
|
||||
# The user can set the variable GCOVR_ADDITIONAL_ARGS to supply additional flags to the
|
||||
# GCVOR command.
|
||||
function(setup_target_for_coverage_gcovr_html)
|
||||
|
||||
set(options NONE)
|
||||
set(oneValueArgs BASE_DIRECTORY NAME)
|
||||
set(multiValueArgs EXCLUDE EXECUTABLE EXECUTABLE_ARGS DEPENDENCIES)
|
||||
cmake_parse_arguments(Coverage "${options}" "${oneValueArgs}" "${multiValueArgs}" ${ARGN})
|
||||
|
||||
if(NOT GCOVR_PATH)
|
||||
message(FATAL_ERROR "gcovr not found! Aborting...")
|
||||
endif() # NOT GCOVR_PATH
|
||||
|
||||
# Set base directory (as absolute path), or default to PROJECT_SOURCE_DIR
|
||||
if(DEFINED Coverage_BASE_DIRECTORY)
|
||||
get_filename_component(BASEDIR ${Coverage_BASE_DIRECTORY} ABSOLUTE)
|
||||
else()
|
||||
set(BASEDIR ${PROJECT_SOURCE_DIR})
|
||||
endif()
|
||||
|
||||
# Collect excludes (CMake 3.4+: Also compute absolute paths)
|
||||
set(GCOVR_EXCLUDES "")
|
||||
foreach(EXCLUDE ${Coverage_EXCLUDE} ${COVERAGE_EXCLUDES} ${COVERAGE_GCOVR_EXCLUDES})
|
||||
if(CMAKE_VERSION VERSION_GREATER 3.4)
|
||||
get_filename_component(EXCLUDE ${EXCLUDE} ABSOLUTE BASE_DIR ${BASEDIR})
|
||||
endif()
|
||||
list(APPEND GCOVR_EXCLUDES "${EXCLUDE}")
|
||||
endforeach()
|
||||
list(REMOVE_DUPLICATES GCOVR_EXCLUDES)
|
||||
|
||||
# Combine excludes to several -e arguments
|
||||
set(GCOVR_EXCLUDE_ARGS "")
|
||||
foreach(EXCLUDE ${GCOVR_EXCLUDES})
|
||||
list(APPEND GCOVR_EXCLUDE_ARGS "-e")
|
||||
list(APPEND GCOVR_EXCLUDE_ARGS "${EXCLUDE}")
|
||||
endforeach()
|
||||
|
||||
# Set up commands which will be run to generate coverage data
|
||||
# Run tests
|
||||
set(GCOVR_HTML_EXEC_TESTS_CMD
|
||||
${Coverage_EXECUTABLE} ${Coverage_EXECUTABLE_ARGS}
|
||||
)
|
||||
# Create folder
|
||||
set(GCOVR_HTML_FOLDER_CMD
|
||||
${CMAKE_COMMAND} -E make_directory ${PROJECT_BINARY_DIR}/${Coverage_NAME}
|
||||
)
|
||||
# Running gcovr
|
||||
set(GCOVR_HTML_CMD
|
||||
${GCOVR_PATH} --html ${Coverage_NAME}/index.html --html-details -r ${BASEDIR} ${GCOVR_ADDITIONAL_ARGS}
|
||||
${GCOVR_EXCLUDE_ARGS} --object-directory=${PROJECT_BINARY_DIR}
|
||||
)
|
||||
|
||||
if(CODE_COVERAGE_VERBOSE)
|
||||
message(STATUS "Executed command report")
|
||||
|
||||
message(STATUS "Command to run tests: ")
|
||||
string(REPLACE ";" " " GCOVR_HTML_EXEC_TESTS_CMD_SPACED "${GCOVR_HTML_EXEC_TESTS_CMD}")
|
||||
message(STATUS "${GCOVR_HTML_EXEC_TESTS_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to create a folder: ")
|
||||
string(REPLACE ";" " " GCOVR_HTML_FOLDER_CMD_SPACED "${GCOVR_HTML_FOLDER_CMD}")
|
||||
message(STATUS "${GCOVR_HTML_FOLDER_CMD_SPACED}")
|
||||
|
||||
message(STATUS "Command to generate gcovr HTML coverage data: ")
|
||||
string(REPLACE ";" " " GCOVR_HTML_CMD_SPACED "${GCOVR_HTML_CMD}")
|
||||
message(STATUS "${GCOVR_HTML_CMD_SPACED}")
|
||||
endif()
|
||||
|
||||
add_custom_target(${Coverage_NAME}
|
||||
COMMAND ${GCOVR_HTML_EXEC_TESTS_CMD}
|
||||
COMMAND ${GCOVR_HTML_FOLDER_CMD}
|
||||
COMMAND ${GCOVR_HTML_CMD}
|
||||
|
||||
BYPRODUCTS ${PROJECT_BINARY_DIR}/${Coverage_NAME}/index.html # report directory
|
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
|
||||
DEPENDS ${Coverage_DEPENDENCIES}
|
||||
VERBATIM # Protect arguments to commands
|
||||
COMMENT "Running gcovr to produce HTML code coverage report."
|
||||
)
|
||||
|
||||
# Show info where to find the report
|
||||
add_custom_command(TARGET ${Coverage_NAME} POST_BUILD
|
||||
COMMAND ;
|
||||
COMMENT "Open ./${Coverage_NAME}/index.html in your browser to view the coverage report."
|
||||
)
|
||||
|
||||
endfunction() # setup_target_for_coverage_gcovr_html
|
||||
|
||||
# Defines a target for running and collection code coverage information
|
||||
# Builds dependencies, runs the given executable and outputs reports.
|
||||
# NOTE! The executable should always have a ZERO as exit code otherwise
|
||||
# the coverage generation will not complete.
|
||||
#
|
||||
# setup_target_for_coverage_fastcov(
|
||||
# NAME testrunner_coverage # New target name
|
||||
# EXECUTABLE testrunner -j ${PROCESSOR_COUNT} # Executable in PROJECT_BINARY_DIR
|
||||
# DEPENDENCIES testrunner # Dependencies to build first
|
||||
# BASE_DIRECTORY "../" # Base directory for report
|
||||
# # (defaults to PROJECT_SOURCE_DIR)
|
||||
# EXCLUDE "src/dir1/" "src/dir2/" # Patterns to exclude.
|
||||
# NO_DEMANGLE # Don't demangle C++ symbols
|
||||
# # even if c++filt is found
|
||||
# SKIP_HTML # Don't create html report
|
||||
# POST_CMD perl -i -pe s!${PROJECT_SOURCE_DIR}/!!g ctest_coverage.json # E.g. for stripping source dir from file paths
|
||||
# )
|
||||
function(setup_target_for_coverage_fastcov)
|
||||
|
||||
set(options NO_DEMANGLE SKIP_HTML)
|
||||
set(oneValueArgs BASE_DIRECTORY NAME)
|
||||
set(multiValueArgs EXCLUDE EXECUTABLE EXECUTABLE_ARGS DEPENDENCIES FASTCOV_ARGS GENHTML_ARGS POST_CMD)
|
||||
cmake_parse_arguments(Coverage "${options}" "${oneValueArgs}" "${multiValueArgs}" ${ARGN})
|
||||
|
||||
if(NOT FASTCOV_PATH)
|
||||
message(FATAL_ERROR "fastcov not found! Aborting...")
|
||||
endif()
|
||||
|
||||
if(NOT Coverage_SKIP_HTML AND NOT GENHTML_PATH)
|
||||
message(FATAL_ERROR "genhtml not found! Aborting...")
|
||||
endif()
|
||||
|
||||
# Set base directory (as absolute path), or default to PROJECT_SOURCE_DIR
|
||||
if(Coverage_BASE_DIRECTORY)
|
||||
get_filename_component(BASEDIR ${Coverage_BASE_DIRECTORY} ABSOLUTE)
|
||||
else()
|
||||
set(BASEDIR ${PROJECT_SOURCE_DIR})
|
||||
endif()
|
||||
|
||||
# Collect excludes (Patterns, not paths, for fastcov)
|
||||
set(FASTCOV_EXCLUDES "")
|
||||
foreach(EXCLUDE ${Coverage_EXCLUDE} ${COVERAGE_EXCLUDES} ${COVERAGE_FASTCOV_EXCLUDES})
|
||||
list(APPEND FASTCOV_EXCLUDES "${EXCLUDE}")
|
||||
endforeach()
|
||||
list(REMOVE_DUPLICATES FASTCOV_EXCLUDES)
|
||||
|
||||
# Conditional arguments
|
||||
if(CPPFILT_PATH AND NOT ${Coverage_NO_DEMANGLE})
|
||||
set(GENHTML_EXTRA_ARGS "--demangle-cpp")
|
||||
endif()
|
||||
|
||||
# Set up commands which will be run to generate coverage data
|
||||
set(FASTCOV_EXEC_TESTS_CMD ${Coverage_EXECUTABLE} ${Coverage_EXECUTABLE_ARGS})
|
||||
|
||||
set(FASTCOV_CAPTURE_CMD ${FASTCOV_PATH} ${Coverage_FASTCOV_ARGS} --gcov ${GCOV_PATH}
|
||||
--search-directory ${BASEDIR}
|
||||
--process-gcno
|
||||
--output ${Coverage_NAME}.json
|
||||
--exclude ${FASTCOV_EXCLUDES}
|
||||
)
|
||||
|
||||
set(FASTCOV_CONVERT_CMD ${FASTCOV_PATH}
|
||||
-C ${Coverage_NAME}.json --lcov --output ${Coverage_NAME}.info
|
||||
)
|
||||
|
||||
if(Coverage_SKIP_HTML)
|
||||
set(FASTCOV_HTML_CMD ";")
|
||||
else()
|
||||
set(FASTCOV_HTML_CMD ${GENHTML_PATH} ${GENHTML_EXTRA_ARGS} ${Coverage_GENHTML_ARGS}
|
||||
-o ${Coverage_NAME} ${Coverage_NAME}.info
|
||||
)
|
||||
endif()
|
||||
|
||||
set(FASTCOV_POST_CMD ";")
|
||||
if(Coverage_POST_CMD)
|
||||
set(FASTCOV_POST_CMD ${Coverage_POST_CMD})
|
||||
endif()
|
||||
|
||||
if(CODE_COVERAGE_VERBOSE)
|
||||
message(STATUS "Code coverage commands for target ${Coverage_NAME} (fastcov):")
|
||||
|
||||
message(" Running tests:")
|
||||
string(REPLACE ";" " " FASTCOV_EXEC_TESTS_CMD_SPACED "${FASTCOV_EXEC_TESTS_CMD}")
|
||||
message(" ${FASTCOV_EXEC_TESTS_CMD_SPACED}")
|
||||
|
||||
message(" Capturing fastcov counters and generating report:")
|
||||
string(REPLACE ";" " " FASTCOV_CAPTURE_CMD_SPACED "${FASTCOV_CAPTURE_CMD}")
|
||||
message(" ${FASTCOV_CAPTURE_CMD_SPACED}")
|
||||
|
||||
message(" Converting fastcov .json to lcov .info:")
|
||||
string(REPLACE ";" " " FASTCOV_CONVERT_CMD_SPACED "${FASTCOV_CONVERT_CMD}")
|
||||
message(" ${FASTCOV_CONVERT_CMD_SPACED}")
|
||||
|
||||
if(NOT Coverage_SKIP_HTML)
|
||||
message(" Generating HTML report: ")
|
||||
string(REPLACE ";" " " FASTCOV_HTML_CMD_SPACED "${FASTCOV_HTML_CMD}")
|
||||
message(" ${FASTCOV_HTML_CMD_SPACED}")
|
||||
endif()
|
||||
if(Coverage_POST_CMD)
|
||||
message(" Running post command: ")
|
||||
string(REPLACE ";" " " FASTCOV_POST_CMD_SPACED "${FASTCOV_POST_CMD}")
|
||||
message(" ${FASTCOV_POST_CMD_SPACED}")
|
||||
endif()
|
||||
endif()
|
||||
|
||||
# Setup target
|
||||
add_custom_target(${Coverage_NAME}
|
||||
|
||||
# Cleanup fastcov
|
||||
COMMAND ${FASTCOV_PATH} ${Coverage_FASTCOV_ARGS} --gcov ${GCOV_PATH}
|
||||
--search-directory ${BASEDIR}
|
||||
--zerocounters
|
||||
|
||||
COMMAND ${FASTCOV_EXEC_TESTS_CMD}
|
||||
COMMAND ${FASTCOV_CAPTURE_CMD}
|
||||
COMMAND ${FASTCOV_CONVERT_CMD}
|
||||
COMMAND ${FASTCOV_HTML_CMD}
|
||||
COMMAND ${FASTCOV_POST_CMD}
|
||||
|
||||
# Set output files as GENERATED (will be removed on 'make clean')
|
||||
BYPRODUCTS
|
||||
${Coverage_NAME}.info
|
||||
${Coverage_NAME}.json
|
||||
${Coverage_NAME}/index.html # report directory
|
||||
|
||||
WORKING_DIRECTORY ${PROJECT_BINARY_DIR}
|
||||
DEPENDS ${Coverage_DEPENDENCIES}
|
||||
VERBATIM # Protect arguments to commands
|
||||
COMMENT "Resetting code coverage counters to zero. Processing code coverage counters and generating report."
|
||||
)
|
||||
|
||||
set(INFO_MSG "fastcov code coverage info report saved in ${Coverage_NAME}.info and ${Coverage_NAME}.json.")
|
||||
if(NOT Coverage_SKIP_HTML)
|
||||
string(APPEND INFO_MSG " Open ${PROJECT_BINARY_DIR}/${Coverage_NAME}/index.html in your browser to view the coverage report.")
|
||||
endif()
|
||||
# Show where to find the fastcov info report
|
||||
add_custom_command(TARGET ${Coverage_NAME} POST_BUILD
|
||||
COMMAND ${CMAKE_COMMAND} -E echo ${INFO_MSG}
|
||||
)
|
||||
|
||||
endfunction() # setup_target_for_coverage_fastcov
|
||||
|
||||
function(append_coverage_compiler_flags)
|
||||
set(CMAKE_C_FLAGS "${CMAKE_C_FLAGS} ${COVERAGE_COMPILER_FLAGS}" PARENT_SCOPE)
|
||||
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${COVERAGE_COMPILER_FLAGS}" PARENT_SCOPE)
|
||||
set(CMAKE_Fortran_FLAGS "${CMAKE_Fortran_FLAGS} ${COVERAGE_COMPILER_FLAGS}" PARENT_SCOPE)
|
||||
message(STATUS "Appending code coverage compiler flags: ${COVERAGE_COMPILER_FLAGS}")
|
||||
endfunction() # append_coverage_compiler_flags
|
||||
|
||||
# Setup coverage for specific library
|
||||
function(append_coverage_compiler_flags_to_target name)
|
||||
separate_arguments(_flag_list NATIVE_COMMAND "${COVERAGE_COMPILER_FLAGS}")
|
||||
target_compile_options(${name} PRIVATE ${_flag_list})
|
||||
if(CMAKE_C_COMPILER_ID STREQUAL "GNU" OR CMAKE_Fortran_COMPILER_ID STREQUAL "GNU")
|
||||
target_link_libraries(${name} PRIVATE gcov)
|
||||
endif()
|
||||
endfunction()
|
||||
@@ -1,22 +0,0 @@
|
||||
if(ENABLE_CLANG_TIDY)
|
||||
find_program(CLANG_TIDY_COMMAND NAMES clang-tidy)
|
||||
|
||||
if(NOT CLANG_TIDY_COMMAND)
|
||||
message(WARNING "🔴 CMake_RUN_CLANG_TIDY is ON but clang-tidy is not found!")
|
||||
set(CMAKE_CXX_CLANG_TIDY "" CACHE STRING "" FORCE)
|
||||
else()
|
||||
|
||||
message(STATUS "🟢 CMake_RUN_CLANG_TIDY is ON")
|
||||
set(CLANGTIDY_EXTRA_ARGS
|
||||
"-extra-arg=-Wno-unknown-warning-option"
|
||||
)
|
||||
set(CMAKE_CXX_CLANG_TIDY "${CLANG_TIDY_COMMAND};-p=${CMAKE_BINARY_DIR};${CLANGTIDY_EXTRA_ARGS}" CACHE STRING "" FORCE)
|
||||
|
||||
add_custom_target(clang-tidy
|
||||
COMMAND ${CMAKE_COMMAND} --build ${CMAKE_BINARY_DIR} --target ${CMAKE_PROJECT_NAME}
|
||||
COMMAND ${CMAKE_COMMAND} --build ${CMAKE_BINARY_DIR} --target clang-tidy
|
||||
COMMENT "Running clang-tidy..."
|
||||
)
|
||||
set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
|
||||
endif()
|
||||
endif(ENABLE_CLANG_TIDY)
|
||||
120
conanfile.py
Normal file
120
conanfile.py
Normal file
@@ -0,0 +1,120 @@
|
||||
import re
|
||||
from conan import ConanFile
|
||||
from conan.tools.files import copy
|
||||
from conan.tools.cmake import CMakeToolchain, CMakeDeps
|
||||
|
||||
|
||||
class FoldingConan(ConanFile):
|
||||
name = "folding"
|
||||
version = "X.X.X"
|
||||
description = "K-Fold and stratified K-Fold header-only library"
|
||||
url = "https://github.com/rmontanana/folding"
|
||||
license = "MIT"
|
||||
homepage = "https://github.com/rmontanana/folding"
|
||||
topics = ("kfold", "stratified folding", "mdlp")
|
||||
no_copy_source = True
|
||||
exports_sources = (
|
||||
"folding.hpp",
|
||||
"LICENSE",
|
||||
"README.md",
|
||||
"CMakeLists.txt",
|
||||
"config/*",
|
||||
"cmake/*",
|
||||
)
|
||||
package_type = "header-library"
|
||||
settings = "build_type", "compiler", "arch", "os"
|
||||
|
||||
def init(self):
|
||||
# Read the CMakeLists.txt file to get the version
|
||||
with open("CMakeLists.txt", "r") as f:
|
||||
lines = f.readlines()
|
||||
for line in lines:
|
||||
if "VERSION" in line:
|
||||
# Extract the version number using regex
|
||||
match = re.search(r"VERSION\s+(\d+\.\d+\.\d+)", line)
|
||||
if match:
|
||||
self.version = match.group(1)
|
||||
|
||||
def requirements(self):
|
||||
self.requires("libtorch/2.7.1")
|
||||
|
||||
def build_requirements(self):
|
||||
self.tool_requires("cmake/[>=3.15]")
|
||||
# Test dependencies
|
||||
self.test_requires("catch2/3.8.1")
|
||||
self.test_requires("arff-files/1.2.1")
|
||||
self.test_requires("fimdlp/2.1.1")
|
||||
|
||||
def layout(self):
|
||||
# Only use cmake_layout for conan packaging, not for development builds
|
||||
# This can be detected by checking if we're in a conan cache folder
|
||||
if (
|
||||
hasattr(self, "folders")
|
||||
and hasattr(self.folders, "base_build")
|
||||
and self.folders.base_build
|
||||
and ".conan2" in self.folders.base_build
|
||||
):
|
||||
from conan.tools.cmake import cmake_layout
|
||||
|
||||
cmake_layout(self)
|
||||
|
||||
def generate(self):
|
||||
# Generate CMake toolchain file
|
||||
tc = CMakeToolchain(self)
|
||||
tc.generate()
|
||||
|
||||
# Generate CMake dependencies file (needed for test requirements like catch2)
|
||||
deps = CMakeDeps(self)
|
||||
deps.generate()
|
||||
|
||||
def build(self):
|
||||
# Use CMake to generate the config file through existing config system
|
||||
from conan.tools.cmake import CMake
|
||||
|
||||
cmake = CMake(self)
|
||||
# Configure with minimal options - just enough to generate the config file
|
||||
cmake.configure(
|
||||
build_script_folder=None,
|
||||
cli_args=["-DENABLE_TESTING=OFF"],
|
||||
)
|
||||
# No need to build anything, just configure to generate the config file
|
||||
|
||||
def package(self):
|
||||
# Copy header file
|
||||
copy(
|
||||
self,
|
||||
"folding.hpp",
|
||||
src=self.source_folder,
|
||||
dst=self.package_folder,
|
||||
keep_path=False,
|
||||
)
|
||||
# Copy the generated config file from CMake build folder
|
||||
copy(
|
||||
self,
|
||||
"folding_config.h",
|
||||
src=f"{self.build_folder}/configured_files/include",
|
||||
dst=self.package_folder,
|
||||
keep_path=False,
|
||||
)
|
||||
# Copy license and readme for package documentation
|
||||
copy(
|
||||
self,
|
||||
"LICENSE",
|
||||
src=self.source_folder,
|
||||
dst=self.package_folder,
|
||||
keep_path=False,
|
||||
)
|
||||
copy(
|
||||
self,
|
||||
"README.md",
|
||||
src=self.source_folder,
|
||||
dst=self.package_folder,
|
||||
keep_path=False,
|
||||
)
|
||||
|
||||
def package_info(self):
|
||||
# Header-only library configuration
|
||||
self.cpp_info.bindirs = []
|
||||
self.cpp_info.libdirs = []
|
||||
# Set include directory (header will be in package root)
|
||||
self.cpp_info.includedirs = ["."]
|
||||
4
config/CMakeLists.txt
Normal file
4
config/CMakeLists.txt
Normal file
@@ -0,0 +1,4 @@
|
||||
configure_file(
|
||||
"config.h.in"
|
||||
"${CMAKE_BINARY_DIR}/configured_files/include/folding_config.h" ESCAPE_QUOTES
|
||||
)
|
||||
12
config/config.h.in
Normal file
12
config/config.h.in
Normal file
@@ -0,0 +1,12 @@
|
||||
#pragma once
|
||||
|
||||
#define FOLDING_VERSION_MAJOR @PROJECT_VERSION_MAJOR@
|
||||
#define FOLDING_VERSION_MINOR @PROJECT_VERSION_MINOR@
|
||||
#define FOLDING_VERSION_PATCH @PROJECT_VERSION_PATCH@
|
||||
|
||||
#define FOLDING_VERSION "@PROJECT_VERSION@"
|
||||
|
||||
static constexpr std::string_view folding_project_name = "@PROJECT_NAME@";
|
||||
static constexpr std::string_view folding_project_version = "@PROJECT_VERSION@";
|
||||
static constexpr std::string_view folding_project_description = "@PROJECT_DESCRIPTION@";
|
||||
static constexpr std::string_view folding_data_path = "@Folding_SOURCE_DIR@/tests/data/";
|
||||
@@ -10,8 +10,8 @@
|
||||
#include <map>
|
||||
#include <random>
|
||||
#include <vector>
|
||||
#include <folding_config.h>
|
||||
namespace folding {
|
||||
const std::string FOLDING_VERSION = "1.1.1";
|
||||
class Fold {
|
||||
public:
|
||||
inline Fold(int k, int n, int seed = -1) : k(k), n(n), seed(seed)
|
||||
|
||||
@@ -1,12 +1,17 @@
|
||||
if(ENABLE_TESTING)
|
||||
include_directories(
|
||||
${Folding_SOURCE_DIR}
|
||||
${CMAKE_BINARY_DIR}/configured_files/include
|
||||
lib/Files
|
||||
lib/mdlp/src
|
||||
)
|
||||
set(TEST_FOLDING "unit_tests_folding")
|
||||
add_executable(${TEST_FOLDING} TestFolding.cc TestUtils.cc)
|
||||
target_link_libraries(${TEST_FOLDING} PUBLIC "${TORCH_LIBRARIES}" ArffFiles fimdlp Catch2::Catch2WithMain)
|
||||
add_test(NAME ${TEST_FOLDING} COMMAND ${TEST_FOLDING})
|
||||
endif(ENABLE_TESTING)
|
||||
set(TEST_FOLDING "unit_tests_folding")
|
||||
add_executable(${TEST_FOLDING} TestFolding.cc TestUtils.cc)
|
||||
target_include_directories(${TEST_FOLDING} PRIVATE
|
||||
${CMAKE_BINARY_DIR}/configured_files/include
|
||||
${Folding_SOURCE_DIR}
|
||||
${catch2_INCLUDE_DIRS_RELEASE}
|
||||
${libtorch_INCLUDE_DIRS_RELEASE}
|
||||
${arff-files_INCLUDE_DIRS_RELEASE}
|
||||
${fimdlp_INCLUDE_DIRS_RELEASE}
|
||||
)
|
||||
target_link_libraries(${TEST_FOLDING} PUBLIC
|
||||
${Torch_LIBRARIES}
|
||||
arff-files::arff-files
|
||||
fimdlp::fimdlp
|
||||
Catch2::Catch2WithMain
|
||||
)
|
||||
add_test(NAME ${TEST_FOLDING} COMMAND ${TEST_FOLDING})
|
||||
|
||||
@@ -9,10 +9,11 @@
|
||||
#include <catch2/generators/catch_generators.hpp>
|
||||
#include "TestUtils.h"
|
||||
#include "folding.hpp"
|
||||
#include <folding_config.h>
|
||||
|
||||
TEST_CASE("Version Test", "[Folding]")
|
||||
{
|
||||
std::string actual_version = "1.1.1";
|
||||
std::string actual_version = FOLDING_VERSION;
|
||||
auto data = std::vector<int>(100);
|
||||
folding::StratifiedKFold stratified_kfold(5, data, 17);
|
||||
REQUIRE(stratified_kfold.version() == actual_version);
|
||||
|
||||
@@ -6,8 +6,9 @@
|
||||
#include <vector>
|
||||
#include <map>
|
||||
#include <tuple>
|
||||
#include "ArffFiles.h"
|
||||
#include "CPPFImdlp.h"
|
||||
#include "ArffFiles.hpp"
|
||||
#include "fimdlp/CPPFImdlp.h"
|
||||
#include "folding_config.h"
|
||||
|
||||
bool file_exists(const std::string& name);
|
||||
std::pair<vector<mdlp::labels_t>, map<std::string, int>> discretize(std::vector<mdlp::samples_t>& X, mdlp::labels_t& y, std::vector<string> features);
|
||||
@@ -44,11 +45,12 @@ class Paths {
|
||||
public:
|
||||
static std::string datasets()
|
||||
{
|
||||
return "../../tests/data/";
|
||||
std::string result = { folding_data_path.begin(), folding_data_path.end() };
|
||||
return result + "/";
|
||||
}
|
||||
static std::string csv()
|
||||
{
|
||||
return "../../tests/csv/";
|
||||
return datasets() + "../csv/";
|
||||
}
|
||||
};
|
||||
class CSVFiles {
|
||||
@@ -73,4 +75,4 @@ public:
|
||||
return indices;
|
||||
}
|
||||
};
|
||||
#endif //TEST_UTILS_H
|
||||
#endif //TEST_UTILS_H
|
||||
|
||||
Submodule tests/lib/Catch2 deleted from 0321d2fce3
@@ -1,174 +0,0 @@
|
||||
// ***************************************************************
|
||||
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
|
||||
// SPDX-FileType: SOURCE
|
||||
// SPDX-License-Identifier: MIT
|
||||
// ***************************************************************
|
||||
|
||||
#include "ArffFiles.h"
|
||||
#include <fstream>
|
||||
#include <sstream>
|
||||
#include <map>
|
||||
#include <iostream>
|
||||
|
||||
ArffFiles::ArffFiles() = default;
|
||||
|
||||
std::vector<std::string> ArffFiles::getLines() const
|
||||
{
|
||||
return lines;
|
||||
}
|
||||
|
||||
unsigned long int ArffFiles::getSize() const
|
||||
{
|
||||
return lines.size();
|
||||
}
|
||||
|
||||
std::vector<std::pair<std::string, std::string>> ArffFiles::getAttributes() const
|
||||
{
|
||||
return attributes;
|
||||
}
|
||||
|
||||
std::string ArffFiles::getClassName() const
|
||||
{
|
||||
return className;
|
||||
}
|
||||
|
||||
std::string ArffFiles::getClassType() const
|
||||
{
|
||||
return classType;
|
||||
}
|
||||
|
||||
std::vector<std::vector<float>>& ArffFiles::getX()
|
||||
{
|
||||
return X;
|
||||
}
|
||||
|
||||
std::vector<int>& ArffFiles::getY()
|
||||
{
|
||||
return y;
|
||||
}
|
||||
|
||||
void ArffFiles::loadCommon(std::string fileName)
|
||||
{
|
||||
std::ifstream file(fileName);
|
||||
if (!file.is_open()) {
|
||||
throw std::invalid_argument("Unable to open file");
|
||||
}
|
||||
std::string line;
|
||||
std::string keyword;
|
||||
std::string attribute;
|
||||
std::string type;
|
||||
std::string type_w;
|
||||
while (getline(file, line)) {
|
||||
if (line.empty() || line[0] == '%' || line == "\r" || line == " ") {
|
||||
continue;
|
||||
}
|
||||
if (line.find("@attribute") != std::string::npos || line.find("@ATTRIBUTE") != std::string::npos) {
|
||||
std::stringstream ss(line);
|
||||
ss >> keyword >> attribute;
|
||||
type = "";
|
||||
while (ss >> type_w)
|
||||
type += type_w + " ";
|
||||
attributes.emplace_back(trim(attribute), trim(type));
|
||||
continue;
|
||||
}
|
||||
if (line[0] == '@') {
|
||||
continue;
|
||||
}
|
||||
lines.push_back(line);
|
||||
}
|
||||
file.close();
|
||||
if (attributes.empty())
|
||||
throw std::invalid_argument("No attributes found");
|
||||
}
|
||||
|
||||
void ArffFiles::load(const std::string& fileName, bool classLast)
|
||||
{
|
||||
int labelIndex;
|
||||
loadCommon(fileName);
|
||||
if (classLast) {
|
||||
className = std::get<0>(attributes.back());
|
||||
classType = std::get<1>(attributes.back());
|
||||
attributes.pop_back();
|
||||
labelIndex = static_cast<int>(attributes.size());
|
||||
} else {
|
||||
className = std::get<0>(attributes.front());
|
||||
classType = std::get<1>(attributes.front());
|
||||
attributes.erase(attributes.begin());
|
||||
labelIndex = 0;
|
||||
}
|
||||
generateDataset(labelIndex);
|
||||
}
|
||||
void ArffFiles::load(const std::string& fileName, const std::string& name)
|
||||
{
|
||||
int labelIndex;
|
||||
loadCommon(fileName);
|
||||
bool found = false;
|
||||
for (int i = 0; i < attributes.size(); ++i) {
|
||||
if (attributes[i].first == name) {
|
||||
className = std::get<0>(attributes[i]);
|
||||
classType = std::get<1>(attributes[i]);
|
||||
attributes.erase(attributes.begin() + i);
|
||||
labelIndex = i;
|
||||
found = true;
|
||||
break;
|
||||
}
|
||||
}
|
||||
if (!found) {
|
||||
throw std::invalid_argument("Class name not found");
|
||||
}
|
||||
generateDataset(labelIndex);
|
||||
}
|
||||
|
||||
void ArffFiles::generateDataset(int labelIndex)
|
||||
{
|
||||
X = std::vector<std::vector<float>>(attributes.size(), std::vector<float>(lines.size()));
|
||||
auto yy = std::vector<std::string>(lines.size(), "");
|
||||
auto removeLines = std::vector<int>(); // Lines with missing values
|
||||
for (size_t i = 0; i < lines.size(); i++) {
|
||||
std::stringstream ss(lines[i]);
|
||||
std::string value;
|
||||
int pos = 0;
|
||||
int xIndex = 0;
|
||||
while (getline(ss, value, ',')) {
|
||||
if (pos++ == labelIndex) {
|
||||
yy[i] = value;
|
||||
} else {
|
||||
if (value == "?") {
|
||||
X[xIndex++][i] = -1;
|
||||
removeLines.push_back(i);
|
||||
} else
|
||||
X[xIndex++][i] = stof(value);
|
||||
}
|
||||
}
|
||||
}
|
||||
for (auto i : removeLines) {
|
||||
yy.erase(yy.begin() + i);
|
||||
for (auto& x : X) {
|
||||
x.erase(x.begin() + i);
|
||||
}
|
||||
}
|
||||
y = factorize(yy);
|
||||
}
|
||||
|
||||
std::string ArffFiles::trim(const std::string& source)
|
||||
{
|
||||
std::string s(source);
|
||||
s.erase(0, s.find_first_not_of(" '\n\r\t"));
|
||||
s.erase(s.find_last_not_of(" '\n\r\t") + 1);
|
||||
return s;
|
||||
}
|
||||
|
||||
std::vector<int> ArffFiles::factorize(const std::vector<std::string>& labels_t)
|
||||
{
|
||||
std::vector<int> yy;
|
||||
yy.reserve(labels_t.size());
|
||||
std::map<std::string, int> labelMap;
|
||||
int i = 0;
|
||||
for (const std::string& label : labels_t) {
|
||||
if (labelMap.find(label) == labelMap.end()) {
|
||||
labelMap[label] = i++;
|
||||
}
|
||||
yy.push_back(labelMap[label]);
|
||||
}
|
||||
return yy;
|
||||
}
|
||||
@@ -1,38 +0,0 @@
|
||||
// ***************************************************************
|
||||
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
|
||||
// SPDX-FileType: SOURCE
|
||||
// SPDX-License-Identifier: MIT
|
||||
// ***************************************************************
|
||||
|
||||
#ifndef ARFFFILES_H
|
||||
#define ARFFFILES_H
|
||||
|
||||
#include <string>
|
||||
#include <vector>
|
||||
|
||||
class ArffFiles {
|
||||
public:
|
||||
ArffFiles();
|
||||
void load(const std::string&, bool = true);
|
||||
void load(const std::string&, const std::string&);
|
||||
std::vector<std::string> getLines() const;
|
||||
unsigned long int getSize() const;
|
||||
std::string getClassName() const;
|
||||
std::string getClassType() const;
|
||||
static std::string trim(const std::string&);
|
||||
std::vector<std::vector<float>>& getX();
|
||||
std::vector<int>& getY();
|
||||
std::vector<std::pair<std::string, std::string>> getAttributes() const;
|
||||
static std::vector<int> factorize(const std::vector<std::string>& labels_t);
|
||||
private:
|
||||
std::vector<std::string> lines;
|
||||
std::vector<std::pair<std::string, std::string>> attributes;
|
||||
std::string className;
|
||||
std::string classType;
|
||||
std::vector<std::vector<float>> X;
|
||||
std::vector<int> y;
|
||||
void generateDataset(int);
|
||||
void loadCommon(std::string);
|
||||
};
|
||||
|
||||
#endif
|
||||
@@ -1 +0,0 @@
|
||||
add_library(ArffFiles ArffFiles.cc)
|
||||
Submodule tests/lib/mdlp deleted from cfb993f5ec
Reference in New Issue
Block a user