Compare commits

...

41 Commits

Author SHA1 Message Date
015b1b0c0f Fix diagram size in manual 2024-05-28 11:43:39 +02:00
7bb8e4df01 Fix back to manual link 2024-05-23 18:59:08 +00:00
53710378de Fix manual generation and deploy 2024-05-23 17:34:48 +00:00
c833e9ba32 Remove coverage report from html folder and integrate in doc 2024-05-23 16:27:02 +02:00
f5cb46ee29 Add doc-install to Makefile 2024-05-22 12:09:58 +02:00
fa35681abe Add documentation link to readme 2024-05-22 11:39:33 +02:00
b0bd0e6eee Create doc target to build documentation 2024-05-22 11:10:21 +02:00
d43be27821 Remove manual and doc pages 2024-05-22 10:17:49 +02:00
a2853dd2e5 Add Doxygen to generate man and manual pages 2024-05-21 23:38:10 +02:00
0341bd5648 Refactor ArffFiles library as a git submodule only for tests 2024-05-21 11:50:19 +00:00
22b742f068 Convert ArffFile library to header only library 2024-05-21 10:11:33 +02:00
2584e8294d Force mutual information methods to be at least 0
There were cases where a tiny negative number was returned (less than -1e-7)
Fix mst glass test that is affected with this change
2024-05-17 11:15:45 +02:00
291ba0fb0e First functional BoostA2DE with its 1st test 2024-05-16 16:33:33 +02:00
80043d5181 First approach to BoostA2DE::trainModel 2024-05-16 14:32:59 +02:00
677ec5613d Add features used to selectKPairs 2024-05-16 14:18:45 +02:00
cccaa6e0af Complete selectKPairs method & test 2024-05-16 13:46:38 +02:00
2e3e0e0fc2 Add selectKParis method 2024-05-16 11:17:21 +02:00
8784a24898 Extract buildModel method to parent class in Boost 2024-05-15 20:00:44 +02:00
54496c68f1 Create Boost class as Boost<x> classifiers parent 2024-05-15 19:49:15 +02:00
1f236a70db Create BoostA2DE base class 2024-05-15 11:53:17 +02:00
ef3c74633c Conditional Entropy test 2024-05-15 11:28:09 +02:00
7efd95095c Merge pull request 'AnDE' (#28) from AnDE into main
Reviewed-on: #28
2024-05-15 09:16:12 +00:00
0e24135d46 Complete Conditional Mutual Information and test 2024-05-15 11:09:23 +02:00
521bfd2a8e Remove unoptimized implementation of conditionalEntropy 2024-05-15 01:24:27 +02:00
e2e0fb0c40 Implement Conditional Mutual Information 2024-05-15 00:48:02 +02:00
56b62a67cc Change BoostAODE tests results because folding upgrade 2024-05-12 20:23:05 +02:00
c0fc107abb Fix catch2 submodule config 2024-05-12 19:05:36 +02:00
d8c44b3b7c Add tests to check the correct version of the mdlp, folding and json libraries 2024-05-12 12:22:44 +02:00
6ab7cd2cbd Remove submodule catch from tests/lib 2024-05-12 11:05:53 +02:00
b578ea8a2d Remove module lib/catch2 2024-05-12 11:04:42 +02:00
9a752d15dc Change build cmake folder names to Debug & Release 2024-05-09 10:51:52 +02:00
4992685e94 Add devcontainer to repository
Fix update_coverage.py with lcov2.1 output
2024-05-08 06:42:19 +00:00
346b693c79 Update pdf coverage report 2024-05-06 18:28:15 +02:00
164c8bd90c Update changelog 2024-05-06 18:02:18 +02:00
ced29a2c2e Refactor coverage report generation
Add some tests to reach 99%
2024-05-06 17:56:00 +02:00
0ec53f405f Fix mistakes in feature selection in SPnDE
Complete the first A2DE test
Update version number
2024-05-05 11:14:01 +02:00
f806015b29 Implement SPnDE and A2DE 2024-05-05 01:35:17 +02:00
8115f25c06 Fix mispell mistake in doc 2024-05-02 10:53:15 +02:00
618a1e539c Return File Library to /lib as it is needed by Local Discretization (factorize) 2024-04-30 20:31:14 +02:00
7aeffba740 Add list of models to README 2024-04-30 18:59:38 +02:00
e79ea63afb Merge pull request 'convergence_best' (#27) from convergence_best into main
Add convergence_best as hyperparameter to allow to take the last or the best accuracy as the accuracy to compare to in convergence

Reviewed-on: #27
2024-04-30 16:22:08 +00:00
1562 changed files with 2309 additions and 590209 deletions

57
.devcontainer/Dockerfile Normal file
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@@ -0,0 +1,57 @@
FROM mcr.microsoft.com/devcontainers/cpp:ubuntu22.04
ARG REINSTALL_CMAKE_VERSION_FROM_SOURCE="3.22.2"
# Optionally install the cmake for vcpkg
COPY ./reinstall-cmake.sh /tmp/
RUN if [ "${REINSTALL_CMAKE_VERSION_FROM_SOURCE}" != "none" ]; then \
chmod +x /tmp/reinstall-cmake.sh && /tmp/reinstall-cmake.sh ${REINSTALL_CMAKE_VERSION_FROM_SOURCE}; \
fi \
&& rm -f /tmp/reinstall-cmake.sh
# [Optional] Uncomment this section to install additional vcpkg ports.
# RUN su vscode -c "${VCPKG_ROOT}/vcpkg install <your-port-name-here>"
# [Optional] Uncomment this section to install additional packages.
RUN apt-get update && export DEBIAN_FRONTEND=noninteractive \
&& apt-get -y install --no-install-recommends wget software-properties-common libdatetime-perl libcapture-tiny-perl libdatetime-format-dateparse-perl libgd-perl
# Add PPA for GCC 13
RUN add-apt-repository ppa:ubuntu-toolchain-r/test
RUN apt-get update
# Install GCC 13.1
RUN apt-get install -y gcc-13 g++-13
# Install lcov 2.1
RUN wget --quiet https://github.com/linux-test-project/lcov/releases/download/v2.1/lcov-2.1.tar.gz && \
tar -xvf lcov-2.1.tar.gz && \
cd lcov-2.1 && \
make install
RUN rm lcov-2.1.tar.gz
RUN rm -fr lcov-2.1
# Install Miniconda
RUN mkdir -p /opt/conda
RUN wget --quiet "https://repo.anaconda.com/miniconda/Miniconda3-latest-Linux-aarch64.sh" -O /opt/conda/miniconda.sh && \
bash /opt/conda/miniconda.sh -b -p /opt/miniconda
# Add conda to PATH
ENV PATH=/opt/miniconda/bin:$PATH
# add CXX and CC to the environment with gcc 13
ENV CXX=/usr/bin/g++-13
ENV CC=/usr/bin/gcc-13
# link the last gcov version
RUN rm /usr/bin/gcov
RUN ln -s /usr/bin/gcov-13 /usr/bin/gcov
# change ownership of /opt/miniconda to vscode user
RUN chown -R vscode:vscode /opt/miniconda
USER vscode
RUN conda init
RUN conda install -y -c conda-forge yaml pytorch

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@@ -0,0 +1,37 @@
// For format details, see https://aka.ms/devcontainer.json. For config options, see the
// README at: https://github.com/devcontainers/templates/tree/main/src/cpp
{
"name": "C++",
"build": {
"dockerfile": "Dockerfile"
},
// "features": {
// "ghcr.io/devcontainers/features/conda:1": {}
// }
// Features to add to the dev container. More info: https://containers.dev/features.
// "features": {},
// Use 'forwardPorts' to make a list of ports inside the container available locally.
// "forwardPorts": [],
// Use 'postCreateCommand' to run commands after the container is created.
"postCreateCommand": "make release && make debug && echo 'Done!'",
// Configure tool-specific properties.
// "customizations": {},
"customizations": {
// Configure properties specific to VS Code.
"vscode": {
"settings": {},
"extensions": [
"ms-vscode.cpptools",
"ms-vscode.cpptools-extension-pack",
"ms-vscode.cpptools-themes",
"ms-vscode.cmake-tools",
"ms-azuretools.vscode-docker",
"jbenden.c-cpp-flylint",
"matepek.vscode-catch2-test-adapter",
"GitHub.copilot"
]
}
}
// Uncomment to connect as root instead. More info: https://aka.ms/dev-containers-non-root.
// "remoteUser": "root"
}

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@@ -0,0 +1,59 @@
#!/usr/bin/env bash
#-------------------------------------------------------------------------------------------------------------
# Copyright (c) Microsoft Corporation. All rights reserved.
# Licensed under the MIT License. See https://go.microsoft.com/fwlink/?linkid=2090316 for license information.
#-------------------------------------------------------------------------------------------------------------
#
set -e
CMAKE_VERSION=${1:-"none"}
if [ "${CMAKE_VERSION}" = "none" ]; then
echo "No CMake version specified, skipping CMake reinstallation"
exit 0
fi
# Cleanup temporary directory and associated files when exiting the script.
cleanup() {
EXIT_CODE=$?
set +e
if [[ -n "${TMP_DIR}" ]]; then
echo "Executing cleanup of tmp files"
rm -Rf "${TMP_DIR}"
fi
exit $EXIT_CODE
}
trap cleanup EXIT
echo "Installing CMake..."
apt-get -y purge --auto-remove cmake
mkdir -p /opt/cmake
architecture=$(dpkg --print-architecture)
case "${architecture}" in
arm64)
ARCH=aarch64 ;;
amd64)
ARCH=x86_64 ;;
*)
echo "Unsupported architecture ${architecture}."
exit 1
;;
esac
CMAKE_BINARY_NAME="cmake-${CMAKE_VERSION}-linux-${ARCH}.sh"
CMAKE_CHECKSUM_NAME="cmake-${CMAKE_VERSION}-SHA-256.txt"
TMP_DIR=$(mktemp -d -t cmake-XXXXXXXXXX)
echo "${TMP_DIR}"
cd "${TMP_DIR}"
curl -sSL "https://github.com/Kitware/CMake/releases/download/v${CMAKE_VERSION}/${CMAKE_BINARY_NAME}" -O
curl -sSL "https://github.com/Kitware/CMake/releases/download/v${CMAKE_VERSION}/${CMAKE_CHECKSUM_NAME}" -O
sha256sum -c --ignore-missing "${CMAKE_CHECKSUM_NAME}"
sh "${TMP_DIR}/${CMAKE_BINARY_NAME}" --prefix=/opt/cmake --skip-license
ln -s /opt/cmake/bin/cmake /usr/local/bin/cmake
ln -s /opt/cmake/bin/ctest /usr/local/bin/ctest

12
.github/dependabot.yml vendored Normal file
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@@ -0,0 +1,12 @@
# To get started with Dependabot version updates, you'll need to specify which
# package ecosystems to update and where the package manifests are located.
# Please see the documentation for more information:
# https://docs.github.com/github/administering-a-repository/configuration-options-for-dependency-updates
# https://containers.dev/guide/dependabot
version: 2
updates:
- package-ecosystem: "devcontainers"
directory: "/"
schedule:
interval: weekly

5
.gitignore vendored
View File

@@ -39,4 +39,9 @@ cmake-build*/**
puml/**
.vscode/settings.json
sample/build
**/.DS_Store
docs/manual
docs/man3
docs/man
docs/Doxyfile

8
.gitmodules vendored
View File

@@ -13,3 +13,11 @@
url = https://github.com/rmontanana/folding
main = main
update = merge
[submodule "tests/lib/catch2"]
path = tests/lib/catch2
url = https://github.com/catchorg/Catch2.git
main = main
update = merge
[submodule "tests/lib/Files"]
path = tests/lib/Files
url = https://github.com/rmontanana/ArffFiles

2
.vscode/launch.json vendored
View File

@@ -16,7 +16,7 @@
"name": "test",
"program": "${workspaceFolder}/build_debug/tests/TestBayesNet",
"args": [
"\"Bisection Best\""
"[Node]"
],
"cwd": "${workspaceFolder}/build_debug/tests"
},

View File

@@ -9,16 +9,28 @@ and this project adheres to [Semantic Versioning](https://semver.org/spec/v2.0.0
### Added
- Add the Library logo generated with <https://openart.ai> to README.md
- Add link to the coverage report in the README.md coverage label.
- Add the *convergence_best* hyperparameter to the BoostAODE class, to control the way the prior accuracy is computed if convergence is set. Default value is *false*.
- Library logo generated with <https://openart.ai> to README.md
- Link to the coverage report in the README.md coverage label.
- *convergence_best* hyperparameter to the BoostAODE class, to control the way the prior accuracy is computed if convergence is set. Default value is *false*.
- SPnDE model.
- A2DE model.
- A2DE & SPnDE tests.
- Add tests to reach 99% of coverage.
- Add tests to check the correct version of the mdlp, folding and json libraries.
- Library documentation generated with Doxygen.
- Link to documentation in the README.md.
### Internal
- Refactor library ArffFile to limit the number of samples with a parameter.
- Refactor tests libraries location to test/lib
- Create library ShuffleArffFile to limit the number of samples with a parameter and shuffle them.
- Refactor catch2 library location to test/lib
- Refactor loadDataset function in tests.
- Remove conditionalEdgeWeights method in BayesMetrics.
- Refactor Coverage Report generation.
- Add devcontainer to work on apple silicon.
- Change build cmake folder names to Debug & Release.
- Add a Makefile target (doc) to generate the documentation.
- Add a Makefile target (doc-install) to install the documentation.
## [1.0.5] 2024-04-20

View File

@@ -1,7 +1,7 @@
cmake_minimum_required(VERSION 3.20)
project(BayesNet
VERSION 1.0.5
VERSION 1.0.5.1
DESCRIPTION "Bayesian Network and basic classifiers Library."
HOMEPAGE_URL "https://github.com/rmontanana/bayesnet"
LANGUAGES CXX
@@ -25,8 +25,12 @@ set(CMAKE_CXX_EXTENSIONS OFF)
set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${TORCH_CXX_FLAGS}")
SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pthread")
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -fprofile-arcs -ftest-coverage -O0 -g")
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -fprofile-arcs -ftest-coverage -fno-elide-constructors")
set(CMAKE_CXX_FLAGS_RELEASE "${CMAKE_CXX_FLAGS_RELEASE} -O3")
if (NOT ${CMAKE_SYSTEM_NAME} MATCHES "Darwin")
set(CMAKE_CXX_FLAGS_DEBUG "${CMAKE_CXX_FLAGS_DEBUG} -fno-default-inline")
endif()
# Options
# -------
option(ENABLE_CLANG_TIDY "Enable to add clang tidy." OFF)
@@ -60,8 +64,8 @@ endif (ENABLE_CLANG_TIDY)
# External libraries - dependencies of BayesNet
# ---------------------------------------------
# include(FetchContent)
add_git_submodule("lib/mdlp")
add_git_submodule("lib/json")
add_git_submodule("lib/mdlp")
# Subdirectories
# --------------
@@ -73,7 +77,6 @@ add_subdirectory(bayesnet)
if (ENABLE_TESTING)
MESSAGE("Testing enabled")
add_subdirectory(tests/lib/catch2)
add_subdirectory(tests/lib/Files)
include(CTest)
add_subdirectory(tests)
endif (ENABLE_TESTING)
@@ -85,4 +88,15 @@ install(TARGETS BayesNet
LIBRARY DESTINATION lib
CONFIGURATIONS Release)
install(DIRECTORY bayesnet/ DESTINATION include/bayesnet FILES_MATCHING CONFIGURATIONS Release PATTERN "*.h")
install(FILES ${CMAKE_BINARY_DIR}/configured_files/include/bayesnet/config.h DESTINATION include/bayesnet CONFIGURATIONS Release)
install(FILES ${CMAKE_BINARY_DIR}/configured_files/include/bayesnet/config.h DESTINATION include/bayesnet CONFIGURATIONS Release)
# Documentation
# -------------
find_package(Doxygen)
set(DOC_DIR ${CMAKE_CURRENT_SOURCE_DIR}/docs)
set(doxyfile_in ${DOC_DIR}/Doxyfile.in)
set(doxyfile ${DOC_DIR}/Doxyfile)
configure_file(${doxyfile_in} ${doxyfile} @ONLY)
doxygen_add_docs(doxygen
WORKING_DIRECTORY ${DOC_DIR}
CONFIG_FILE ${doxyfile})

View File

@@ -1,19 +1,23 @@
SHELL := /bin/bash
.DEFAULT_GOAL := help
.PHONY: viewcoverage coverage setup help install uninstall diagrams buildr buildd test clean debug release sample updatebadge
.PHONY: viewcoverage coverage setup help install uninstall diagrams buildr buildd test clean debug release sample updatebadge doc doc-install
f_release = build_release
f_debug = build_debug
f_release = build_Release
f_debug = build_Debug
f_diagrams = diagrams
app_targets = BayesNet
test_targets = TestBayesNet
clang-uml = clang-uml
plantuml = plantuml
gcovr = gcovr
lcov = lcov
genhtml = genhtml
dot = dot
n_procs = -j 16
docsrcdir = docs/manual
mansrcdir = docs/man3
mandestdir = /usr/local/share/man
sed_command_link = 's/e">LCOV -/e"><a href="https:\/\/rmontanana.github.io\/bayesnet">Back to manual<\/a> LCOV -/g'
sed_command_diagram = 's/Diagram"/Diagram" width="100%" height="100%" /g'
define ClearTests
@for t in $(test_targets); do \
@@ -115,25 +119,30 @@ test: ## Run tests (opt="-s") to verbose output the tests, (opt="-c='Test Maximu
coverage: ## Run tests and generate coverage report (build/index.html)
@echo ">>> Building tests with coverage..."
@which $(gcovr) || (echo ">>> Please install gcovr"; exit 1)
@which $(lcov) || (echo ">>> Please install lcov"; exit 1)
@which $(genhtml) || (echo ">>> Please install lcov"; exit 1)
@$(MAKE) test
@$(gcovr) $(f_debug)/tests
@if [ ! -f $(f_debug)/tests/coverage.info ] ; then $(MAKE) test ; fi
@echo ">>> Building report..."
@cd $(f_debug)/tests; \
$(lcov) --directory CMakeFiles --capture --ignore-errors source,source --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --directory CMakeFiles --capture --demangle-cpp --ignore-errors source,source --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --remove coverage.info '/usr/*' --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --remove coverage.info 'lib/*' --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --remove coverage.info 'libtorch/*' --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --remove coverage.info 'tests/*' --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --remove coverage.info 'bayesnet/utils/loguru.*' --ignore-errors unused --output-file coverage.info >/dev/null 2>&1
@$(genhtml) $(f_debug)/tests/coverage.info --demangle-cpp --output-directory html >/dev/null 2>&1;
$(lcov) --remove coverage.info 'bayesnet/utils/loguru.*' --ignore-errors unused --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --remove coverage.info '/opt/miniconda/*' --ignore-errors unused --output-file coverage.info >/dev/null 2>&1; \
$(lcov) --summary coverage.info
@$(MAKE) updatebadge
@echo ">>> Done";
viewcoverage: ## View the html coverage report
@xdg-open html/index.html || open html/index.html 2>/dev/null
@which $(genhtml) >/dev/null || (echo ">>> Please install lcov (genhtml not found)"; exit 1)
@if [ ! -d $(docsrcdir)/coverage ]; then mkdir -p $(docsrcdir)/coverage; fi
@if [ ! -f $(f_debug)/tests/coverage.info ]; then \
echo ">>> No coverage.info file found. Run make coverage first!"; \
exit 1; \
fi
@$(genhtml) $(f_debug)/tests/coverage.info --demangle-cpp --output-directory $(docsrcdir)/coverage --title "BayesNet Coverage Report" -s -k -f --legend >/dev/null 2>&1;
@xdg-open $(docsrcdir)/coverage/index.html || open $(docsrcdir)/coverage/index.html 2>/dev/null
@echo ">>> Done";
updatebadge: ## Update the coverage badge in README.md
@@ -146,6 +155,34 @@ updatebadge: ## Update the coverage badge in README.md
@env python update_coverage.py $(f_debug)/tests
@echo ">>> Done";
doc: ## Generate documentation
@echo ">>> Generating documentation..."
@cmake --build $(f_release) -t doxygen
@cp -rp diagrams $(docsrcdir)
@
@if [ "$(shell uname)" = "Darwin" ]; then \
sed -i "" $(sed_command_link) $(docsrcdir)/coverage/index.html ; \
sed -i "" $(sed_command_diagram) $(docsrcdir)/index.html ; \
else \
sed -i $(sed_command_link) $(docsrcdir)/coverage/index.html ; \
sed -i $(sed_command_diagram) $(docsrcdir)/index.html ; \
fi
@echo ">>> Done";
docdir = ""
doc-install: ## Install documentation
@echo ">>> Installing documentation..."
@if [ "$(docdir)" = "" ]; then \
echo "docdir parameter has to be set when calling doc-install"; \
exit 1; \
fi
@if [ ! -d $(docdir) ]; then \
@$(MAKE) doc; \
fi
@cp -rp $(docsrcdir)/* $(docdir)
@sudo cp -rp $(mansrcdir) $(mandestdir)
@echo ">>> Done";
help: ## Show help message
@IFS=$$'\n' ; \
help_lines=(`fgrep -h "##" $(MAKEFILE_LIST) | fgrep -v fgrep | sed -e 's/\\$$//' | sed -e 's/##/:/'`); \

View File

@@ -7,7 +7,7 @@
[![Security Rating](https://sonarcloud.io/api/project_badges/measure?project=rmontanana_BayesNet&metric=security_rating)](https://sonarcloud.io/summary/new_code?id=rmontanana_BayesNet)
[![Reliability Rating](https://sonarcloud.io/api/project_badges/measure?project=rmontanana_BayesNet&metric=reliability_rating)](https://sonarcloud.io/summary/new_code?id=rmontanana_BayesNet)
![Gitea Last Commit](https://img.shields.io/gitea/last-commit/rmontanana/bayesnet?gitea_url=https://gitea.rmontanana.es:3000&logo=gitea)
[![Coverage Badge](https://img.shields.io/badge/Coverage-97,8%25-green)](html/index.html)
[![Coverage Badge](https://img.shields.io/badge/Coverage-97,3%25-green)](html/index.html)
Bayesian Network Classifiers using libtorch from scratch
@@ -61,7 +61,35 @@ make sample fname=tests/data/glass.arff
## Models
### [BoostAODE](docs/BoostAODE.md)
#### - TAN
#### - KDB
#### - SPODE
#### - SPnDE
#### - AODE
#### - [BoostAODE](docs/BoostAODE.md)
#### - BoostA2DE
### With Local Discretization
#### - TANLd
#### - KDBLd
#### - SPODELd
#### - AODELd
## Documentation
### [Manual](https://rmontanana.github.io/bayesnet/)
### [Coverage report](https://rmontanana.github.io/bayesnet/coverage/index.html)
## Diagrams
@@ -72,7 +100,3 @@ make sample fname=tests/data/glass.arff
### Dependency Diagram
![BayesNet Dependency Diagram](diagrams/dependency.svg)
## Coverage report
### [Coverage report](docs/coverage.pdf)

View File

@@ -1,6 +1,5 @@
include_directories(
${BayesNet_SOURCE_DIR}/lib/mdlp
${BayesNet_SOURCE_DIR}/lib/Files
${BayesNet_SOURCE_DIR}/lib/folding
${BayesNet_SOURCE_DIR}/lib/json/include
${BayesNet_SOURCE_DIR}

View File

@@ -4,7 +4,6 @@
// SPDX-License-Identifier: MIT
// ***************************************************************
#include <ArffFiles.h>
#include "Proposal.h"
namespace bayesnet {
@@ -54,8 +53,7 @@ namespace bayesnet {
yJoinParents[i] += to_string(pDataset.index({ idx, i }).item<int>());
}
}
auto arff = ArffFiles();
auto yxv = arff.factorize(yJoinParents);
auto yxv = factorize(yJoinParents);
auto xvf_ptr = Xf.index({ index }).data_ptr<float>();
auto xvf = std::vector<mdlp::precision_t>(xvf_ptr, xvf_ptr + Xf.size(1));
discretizers[feature]->fit(xvf, yxv);
@@ -113,4 +111,19 @@ namespace bayesnet {
}
return Xtd;
}
std::vector<int> Proposal::factorize(const std::vector<std::string>& labels_t)
{
std::vector<int> yy;
yy.reserve(labels_t.size());
std::map<std::string, int> labelMap;
int i = 0;
for (const std::string& label : labels_t) {
if (labelMap.find(label) == labelMap.end()) {
labelMap[label] = i++;
bool allDigits = std::all_of(label.begin(), label.end(), ::isdigit);
}
yy.push_back(labelMap[label]);
}
return yy;
}
}

View File

@@ -27,6 +27,7 @@ namespace bayesnet {
torch::Tensor y; // y discrete nx1 tensor
map<std::string, mdlp::CPPFImdlp*> discretizers;
private:
std::vector<int> factorize(const std::vector<std::string>& labels_t);
torch::Tensor& pDataset; // (n+1)xm tensor
std::vector<std::string>& pFeatures;
std::string& pClassName;

View File

@@ -0,0 +1,38 @@
// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#include "SPnDE.h"
namespace bayesnet {
SPnDE::SPnDE(std::vector<int> parents) : Classifier(Network()), parents(parents) {}
void SPnDE::buildModel(const torch::Tensor& weights)
{
// 0. Add all nodes to the model
addNodes();
std::vector<int> attributes;
for (int i = 0; i < static_cast<int>(features.size()); ++i) {
if (std::find(parents.begin(), parents.end(), i) == parents.end()) {
attributes.push_back(i);
}
}
// 1. Add edges from the class node to all other nodes
// 2. Add edges from the parents nodes to all other nodes
for (const auto& attribute : attributes) {
model.addEdge(className, features[attribute]);
for (const auto& root : parents) {
model.addEdge(features[root], features[attribute]);
}
}
}
std::vector<std::string> SPnDE::graph(const std::string& name) const
{
return model.graph(name);
}
}

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#ifndef SPnDE_H
#define SPnDE_H
#include <vector>
#include "Classifier.h"
namespace bayesnet {
class SPnDE : public Classifier {
public:
explicit SPnDE(std::vector<int> parents);
virtual ~SPnDE() = default;
std::vector<std::string> graph(const std::string& name = "SPnDE") const override;
protected:
void buildModel(const torch::Tensor& weights) override;
private:
std::vector<int> parents;
};
}
#endif

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#include "A2DE.h"
namespace bayesnet {
A2DE::A2DE(bool predict_voting) : Ensemble(predict_voting)
{
validHyperparameters = { "predict_voting" };
}
void A2DE::setHyperparameters(const nlohmann::json& hyperparameters_)
{
auto hyperparameters = hyperparameters_;
if (hyperparameters.contains("predict_voting")) {
predict_voting = hyperparameters["predict_voting"];
hyperparameters.erase("predict_voting");
}
Classifier::setHyperparameters(hyperparameters);
}
void A2DE::buildModel(const torch::Tensor& weights)
{
models.clear();
significanceModels.clear();
for (int i = 0; i < features.size() - 1; ++i) {
for (int j = i + 1; j < features.size(); ++j) {
auto model = std::make_unique<SPnDE>(std::vector<int>({ i, j }));
models.push_back(std::move(model));
}
}
n_models = static_cast<unsigned>(models.size());
significanceModels = std::vector<double>(n_models, 1.0);
}
std::vector<std::string> A2DE::graph(const std::string& title) const
{
return Ensemble::graph(title);
}
}

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#ifndef A2DE_H
#define A2DE_H
#include "bayesnet/classifiers/SPnDE.h"
#include "Ensemble.h"
namespace bayesnet {
class A2DE : public Ensemble {
public:
A2DE(bool predict_voting = false);
virtual ~A2DE() {};
void setHyperparameters(const nlohmann::json& hyperparameters) override;
std::vector<std::string> graph(const std::string& title = "A2DE") const override;
protected:
void buildModel(const torch::Tensor& weights) override;
};
}
#endif

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#include <folding.hpp>
#include "bayesnet/feature_selection/CFS.h"
#include "bayesnet/feature_selection/FCBF.h"
#include "bayesnet/feature_selection/IWSS.h"
#include "Boost.h"
namespace bayesnet {
Boost::Boost(bool predict_voting) : Ensemble(predict_voting)
{
validHyperparameters = { "order", "convergence", "convergence_best", "bisection", "threshold", "maxTolerance",
"predict_voting", "select_features", "block_update" };
}
void Boost::setHyperparameters(const nlohmann::json& hyperparameters_)
{
auto hyperparameters = hyperparameters_;
if (hyperparameters.contains("order")) {
std::vector<std::string> algos = { Orders.ASC, Orders.DESC, Orders.RAND };
order_algorithm = hyperparameters["order"];
if (std::find(algos.begin(), algos.end(), order_algorithm) == algos.end()) {
throw std::invalid_argument("Invalid order algorithm, valid values [" + Orders.ASC + ", " + Orders.DESC + ", " + Orders.RAND + "]");
}
hyperparameters.erase("order");
}
if (hyperparameters.contains("convergence")) {
convergence = hyperparameters["convergence"];
hyperparameters.erase("convergence");
}
if (hyperparameters.contains("convergence_best")) {
convergence_best = hyperparameters["convergence_best"];
hyperparameters.erase("convergence_best");
}
if (hyperparameters.contains("bisection")) {
bisection = hyperparameters["bisection"];
hyperparameters.erase("bisection");
}
if (hyperparameters.contains("threshold")) {
threshold = hyperparameters["threshold"];
hyperparameters.erase("threshold");
}
if (hyperparameters.contains("maxTolerance")) {
maxTolerance = hyperparameters["maxTolerance"];
if (maxTolerance < 1 || maxTolerance > 4)
throw std::invalid_argument("Invalid maxTolerance value, must be greater in [1, 4]");
hyperparameters.erase("maxTolerance");
}
if (hyperparameters.contains("predict_voting")) {
predict_voting = hyperparameters["predict_voting"];
hyperparameters.erase("predict_voting");
}
if (hyperparameters.contains("select_features")) {
auto selectedAlgorithm = hyperparameters["select_features"];
std::vector<std::string> algos = { SelectFeatures.IWSS, SelectFeatures.CFS, SelectFeatures.FCBF };
selectFeatures = true;
select_features_algorithm = selectedAlgorithm;
if (std::find(algos.begin(), algos.end(), selectedAlgorithm) == algos.end()) {
throw std::invalid_argument("Invalid selectFeatures value, valid values [" + SelectFeatures.IWSS + ", " + SelectFeatures.CFS + ", " + SelectFeatures.FCBF + "]");
}
hyperparameters.erase("select_features");
}
if (hyperparameters.contains("block_update")) {
block_update = hyperparameters["block_update"];
hyperparameters.erase("block_update");
}
Classifier::setHyperparameters(hyperparameters);
}
void Boost::buildModel(const torch::Tensor& weights)
{
// Models shall be built in trainModel
models.clear();
significanceModels.clear();
n_models = 0;
// Prepare the validation dataset
auto y_ = dataset.index({ -1, "..." });
if (convergence) {
// Prepare train & validation sets from train data
auto fold = folding::StratifiedKFold(5, y_, 271);
auto [train, test] = fold.getFold(0);
auto train_t = torch::tensor(train);
auto test_t = torch::tensor(test);
// Get train and validation sets
X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), train_t });
y_train = dataset.index({ -1, train_t });
X_test = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), test_t });
y_test = dataset.index({ -1, test_t });
dataset = X_train;
m = X_train.size(1);
auto n_classes = states.at(className).size();
// Build dataset with train data
buildDataset(y_train);
metrics = Metrics(dataset, features, className, n_classes);
} else {
// Use all data to train
X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), "..." });
y_train = y_;
}
}
std::vector<int> Boost::featureSelection(torch::Tensor& weights_)
{
int maxFeatures = 0;
if (select_features_algorithm == SelectFeatures.CFS) {
featureSelector = new CFS(dataset, features, className, maxFeatures, states.at(className).size(), weights_);
} else if (select_features_algorithm == SelectFeatures.IWSS) {
if (threshold < 0 || threshold >0.5) {
throw std::invalid_argument("Invalid threshold value for " + SelectFeatures.IWSS + " [0, 0.5]");
}
featureSelector = new IWSS(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);
} else if (select_features_algorithm == SelectFeatures.FCBF) {
if (threshold < 1e-7 || threshold > 1) {
throw std::invalid_argument("Invalid threshold value for " + SelectFeatures.FCBF + " [1e-7, 1]");
}
featureSelector = new FCBF(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);
}
featureSelector->fit();
auto featuresUsed = featureSelector->getFeatures();
delete featureSelector;
return featuresUsed;
}
std::tuple<torch::Tensor&, double, bool> Boost::update_weights(torch::Tensor& ytrain, torch::Tensor& ypred, torch::Tensor& weights)
{
bool terminate = false;
double alpha_t = 0;
auto mask_wrong = ypred != ytrain;
auto mask_right = ypred == ytrain;
auto masked_weights = weights * mask_wrong.to(weights.dtype());
double epsilon_t = masked_weights.sum().item<double>();
if (epsilon_t > 0.5) {
// Inverse the weights policy (plot ln(wt))
// "In each round of AdaBoost, there is a sanity check to ensure that the current base
// learner is better than random guess" (Zhi-Hua Zhou, 2012)
terminate = true;
} else {
double wt = (1 - epsilon_t) / epsilon_t;
alpha_t = epsilon_t == 0 ? 1 : 0.5 * log(wt);
// Step 3.2: Update weights for next classifier
// Step 3.2.1: Update weights of wrong samples
weights += mask_wrong.to(weights.dtype()) * exp(alpha_t) * weights;
// Step 3.2.2: Update weights of right samples
weights += mask_right.to(weights.dtype()) * exp(-alpha_t) * weights;
// Step 3.3: Normalise the weights
double totalWeights = torch::sum(weights).item<double>();
weights = weights / totalWeights;
}
return { weights, alpha_t, terminate };
}
std::tuple<torch::Tensor&, double, bool> Boost::update_weights_block(int k, torch::Tensor& ytrain, torch::Tensor& weights)
{
/* Update Block algorithm
k = # of models in block
n_models = # of models in ensemble to make predictions
n_models_bak = # models saved
models = vector of models to make predictions
models_bak = models not used to make predictions
significances_bak = backup of significances vector
Case list
A) k = 1, n_models = 1 => n = 0 , n_models = n + k
B) k = 1, n_models = n + 1 => n_models = n + k
C) k > 1, n_models = k + 1 => n= 1, n_models = n + k
D) k > 1, n_models = k => n = 0, n_models = n + k
E) k > 1, n_models = k + n => n_models = n + k
A, D) n=0, k > 0, n_models == k
1. n_models_bak <- n_models
2. significances_bak <- significances
3. significances = vector(k, 1)
4. Dont move any classifiers out of models
5. n_models <- k
6. Make prediction, compute alpha, update weights
7. Dont restore any classifiers to models
8. significances <- significances_bak
9. Update last k significances
10. n_models <- n_models_bak
B, C, E) n > 0, k > 0, n_models == n + k
1. n_models_bak <- n_models
2. significances_bak <- significances
3. significances = vector(k, 1)
4. Move first n classifiers to models_bak
5. n_models <- k
6. Make prediction, compute alpha, update weights
7. Insert classifiers in models_bak to be the first n models
8. significances <- significances_bak
9. Update last k significances
10. n_models <- n_models_bak
*/
//
// Make predict with only the last k models
//
std::unique_ptr<Classifier> model;
std::vector<std::unique_ptr<Classifier>> models_bak;
// 1. n_models_bak <- n_models 2. significances_bak <- significances
auto significance_bak = significanceModels;
auto n_models_bak = n_models;
// 3. significances = vector(k, 1)
significanceModels = std::vector<double>(k, 1.0);
// 4. Move first n classifiers to models_bak
// backup the first n_models - k models (if n_models == k, don't backup any)
for (int i = 0; i < n_models - k; ++i) {
model = std::move(models[0]);
models.erase(models.begin());
models_bak.push_back(std::move(model));
}
assert(models.size() == k);
// 5. n_models <- k
n_models = k;
// 6. Make prediction, compute alpha, update weights
auto ypred = predict(X_train);
//
// Update weights
//
double alpha_t;
bool terminate;
std::tie(weights, alpha_t, terminate) = update_weights(y_train, ypred, weights);
//
// Restore the models if needed
//
// 7. Insert classifiers in models_bak to be the first n models
// if n_models_bak == k, don't restore any, because none of them were moved
if (k != n_models_bak) {
// Insert in the same order as they were extracted
int bak_size = models_bak.size();
for (int i = 0; i < bak_size; ++i) {
model = std::move(models_bak[bak_size - 1 - i]);
models_bak.erase(models_bak.end() - 1);
models.insert(models.begin(), std::move(model));
}
}
// 8. significances <- significances_bak
significanceModels = significance_bak;
//
// Update the significance of the last k models
//
// 9. Update last k significances
for (int i = 0; i < k; ++i) {
significanceModels[n_models_bak - k + i] = alpha_t;
}
// 10. n_models <- n_models_bak
n_models = n_models_bak;
return { weights, alpha_t, terminate };
}
}

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#ifndef BOOST_H
#define BOOST_H
#include <string>
#include <tuple>
#include <vector>
#include <nlohmann/json.hpp>
#include <torch/torch.h>
#include "Ensemble.h"
#include "bayesnet/feature_selection/FeatureSelect.h"
namespace bayesnet {
const struct {
std::string CFS = "CFS";
std::string FCBF = "FCBF";
std::string IWSS = "IWSS";
}SelectFeatures;
const struct {
std::string ASC = "asc";
std::string DESC = "desc";
std::string RAND = "rand";
}Orders;
class Boost : public Ensemble {
public:
explicit Boost(bool predict_voting = false);
virtual ~Boost() = default;
void setHyperparameters(const nlohmann::json& hyperparameters_) override;
protected:
std::vector<int> featureSelection(torch::Tensor& weights_);
void buildModel(const torch::Tensor& weights) override;
std::tuple<torch::Tensor&, double, bool> update_weights(torch::Tensor& ytrain, torch::Tensor& ypred, torch::Tensor& weights);
std::tuple<torch::Tensor&, double, bool> update_weights_block(int k, torch::Tensor& ytrain, torch::Tensor& weights);
torch::Tensor X_train, y_train, X_test, y_test;
// Hyperparameters
bool bisection = true; // if true, use bisection stratety to add k models at once to the ensemble
int maxTolerance = 3;
std::string order_algorithm; // order to process the KBest features asc, desc, rand
bool convergence = true; //if true, stop when the model does not improve
bool convergence_best = false; // wether to keep the best accuracy to the moment or the last accuracy as prior accuracy
bool selectFeatures = false; // if true, use feature selection
std::string select_features_algorithm = Orders.DESC; // Selected feature selection algorithm
FeatureSelect* featureSelector = nullptr;
double threshold = -1;
bool block_update = false;
};
}
#endif

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#include <set>
#include <functional>
#include <limits.h>
#include <tuple>
#include <folding.hpp>
#include "bayesnet/feature_selection/CFS.h"
#include "bayesnet/feature_selection/FCBF.h"
#include "bayesnet/feature_selection/IWSS.h"
#include "BoostA2DE.h"
namespace bayesnet {
BoostA2DE::BoostA2DE(bool predict_voting) : Boost(predict_voting)
{
}
std::vector<int> BoostA2DE::initializeModels()
{
torch::Tensor weights_ = torch::full({ m }, 1.0 / m, torch::kFloat64);
std::vector<int> featuresSelected = featureSelection(weights_);
if (featuresSelected.size() < 2) {
notes.push_back("No features selected in initialization");
status = ERROR;
return std::vector<int>();
}
for (int i = 0; i < featuresSelected.size() - 1; i++) {
for (int j = i + 1; j < featuresSelected.size(); j++) {
auto parents = { featuresSelected[i], featuresSelected[j] };
std::unique_ptr<Classifier> model = std::make_unique<SPnDE>(parents);
model->fit(dataset, features, className, states, weights_);
models.push_back(std::move(model));
significanceModels.push_back(1.0); // They will be updated later in trainModel
n_models++;
}
}
notes.push_back("Used features in initialization: " + std::to_string(featuresSelected.size()) + " of " + std::to_string(features.size()) + " with " + select_features_algorithm);
return featuresSelected;
}
void BoostA2DE::trainModel(const torch::Tensor& weights)
{
//
// Logging setup
//
// loguru::set_thread_name("BoostA2DE");
// loguru::g_stderr_verbosity = loguru::Verbosity_OFF;
// loguru::add_file("boostA2DE.log", loguru::Truncate, loguru::Verbosity_MAX);
// Algorithm based on the adaboost algorithm for classification
// as explained in Ensemble methods (Zhi-Hua Zhou, 2012)
fitted = true;
double alpha_t = 0;
torch::Tensor weights_ = torch::full({ m }, 1.0 / m, torch::kFloat64);
bool finished = false;
std::vector<int> featuresUsed;
if (selectFeatures) {
featuresUsed = initializeModels();
auto ypred = predict(X_train);
std::tie(weights_, alpha_t, finished) = update_weights(y_train, ypred, weights_);
// Update significance of the models
for (int i = 0; i < n_models; ++i) {
significanceModels[i] = alpha_t;
}
if (finished) {
return;
}
}
int numItemsPack = 0; // The counter of the models inserted in the current pack
// Variables to control the accuracy finish condition
double priorAccuracy = 0.0;
double improvement = 1.0;
double convergence_threshold = 1e-4;
int tolerance = 0; // number of times the accuracy is lower than the convergence_threshold
// Step 0: Set the finish condition
// epsilon sub t > 0.5 => inverse the weights policy
// validation error is not decreasing
// run out of features
bool ascending = order_algorithm == Orders.ASC;
std::mt19937 g{ 173 };
std::vector<std::pair<int, int>> pairSelection;
while (!finished) {
// Step 1: Build ranking with mutual information
pairSelection = metrics.SelectKPairs(weights_, featuresUsed, ascending, 0); // Get all the pairs sorted
if (order_algorithm == Orders.RAND) {
std::shuffle(pairSelection.begin(), pairSelection.end(), g);
}
int k = bisection ? pow(2, tolerance) : 1;
int counter = 0; // The model counter of the current pack
// VLOG_SCOPE_F(1, "counter=%d k=%d featureSelection.size: %zu", counter, k, featureSelection.size());
while (counter++ < k && pairSelection.size() > 0) {
auto feature_pair = pairSelection[0];
pairSelection.erase(pairSelection.begin());
std::unique_ptr<Classifier> model;
model = std::make_unique<SPnDE>(std::vector<int>({ feature_pair.first, feature_pair.second }));
model->fit(dataset, features, className, states, weights_);
alpha_t = 0.0;
if (!block_update) {
auto ypred = model->predict(X_train);
// Step 3.1: Compute the classifier amout of say
std::tie(weights_, alpha_t, finished) = update_weights(y_train, ypred, weights_);
}
// Step 3.4: Store classifier and its accuracy to weigh its future vote
numItemsPack++;
models.push_back(std::move(model));
significanceModels.push_back(alpha_t);
n_models++;
// VLOG_SCOPE_F(2, "numItemsPack: %d n_models: %d featuresUsed: %zu", numItemsPack, n_models, featuresUsed.size());
}
if (block_update) {
std::tie(weights_, alpha_t, finished) = update_weights_block(k, y_train, weights_);
}
if (convergence && !finished) {
auto y_val_predict = predict(X_test);
double accuracy = (y_val_predict == y_test).sum().item<double>() / (double)y_test.size(0);
if (priorAccuracy == 0) {
priorAccuracy = accuracy;
} else {
improvement = accuracy - priorAccuracy;
}
if (improvement < convergence_threshold) {
// VLOG_SCOPE_F(3, " (improvement<threshold) tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f", tolerance, numItemsPack, improvement, priorAccuracy, accuracy);
tolerance++;
} else {
// VLOG_SCOPE_F(3, "* (improvement>=threshold) Reset. tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f", tolerance, numItemsPack, improvement, priorAccuracy, accuracy);
tolerance = 0; // Reset the counter if the model performs better
numItemsPack = 0;
}
if (convergence_best) {
// Keep the best accuracy until now as the prior accuracy
priorAccuracy = std::max(accuracy, priorAccuracy);
} else {
// Keep the last accuray obtained as the prior accuracy
priorAccuracy = accuracy;
}
}
// VLOG_SCOPE_F(1, "tolerance: %d featuresUsed.size: %zu features.size: %zu", tolerance, featuresUsed.size(), features.size());
finished = finished || tolerance > maxTolerance || pairSelection.size() == 0;
}
if (tolerance > maxTolerance) {
if (numItemsPack < n_models) {
notes.push_back("Convergence threshold reached & " + std::to_string(numItemsPack) + " models eliminated");
// VLOG_SCOPE_F(4, "Convergence threshold reached & %d models eliminated of %d", numItemsPack, n_models);
for (int i = 0; i < numItemsPack; ++i) {
significanceModels.pop_back();
models.pop_back();
n_models--;
}
} else {
notes.push_back("Convergence threshold reached & 0 models eliminated");
// VLOG_SCOPE_F(4, "Convergence threshold reached & 0 models eliminated n_models=%d numItemsPack=%d", n_models, numItemsPack);
}
}
if (pairSelection.size() > 0) {
notes.push_back("Pairs not used in train: " + std::to_string(pairSelection.size()));
status = WARNING;
}
notes.push_back("Number of models: " + std::to_string(n_models));
}
std::vector<std::string> BoostA2DE::graph(const std::string& title) const
{
return Ensemble::graph(title);
}
}

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#ifndef BOOSTA2DE_H
#define BOOSTA2DE_H
#include <string>
#include <vector>
#include "bayesnet/classifiers/SPnDE.h"
#include "Boost.h"
namespace bayesnet {
class BoostA2DE : public Boost {
public:
explicit BoostA2DE(bool predict_voting = false);
virtual ~BoostA2DE() = default;
std::vector<std::string> graph(const std::string& title = "BoostA2DE") const override;
protected:
void trainModel(const torch::Tensor& weights) override;
private:
std::vector<int> initializeModels();
};
}
#endif

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@@ -4,275 +4,40 @@
// SPDX-License-Identifier: MIT
// ***************************************************************
#include <random>
#include <set>
#include <functional>
#include <limits.h>
#include <tuple>
#include <folding.hpp>
#include "bayesnet/feature_selection/CFS.h"
#include "bayesnet/feature_selection/FCBF.h"
#include "bayesnet/feature_selection/IWSS.h"
#include "BoostAODE.h"
#include "lib/log/loguru.cpp"
namespace bayesnet {
BoostAODE::BoostAODE(bool predict_voting) : Ensemble(predict_voting)
BoostAODE::BoostAODE(bool predict_voting) : Boost(predict_voting)
{
validHyperparameters = {
"maxModels", "bisection", "order", "convergence", "convergence_best", "threshold",
"select_features", "maxTolerance", "predict_voting", "block_update"
};
}
void BoostAODE::buildModel(const torch::Tensor& weights)
{
// Models shall be built in trainModel
models.clear();
significanceModels.clear();
n_models = 0;
// Prepare the validation dataset
auto y_ = dataset.index({ -1, "..." });
if (convergence) {
// Prepare train & validation sets from train data
auto fold = folding::StratifiedKFold(5, y_, 271);
auto [train, test] = fold.getFold(0);
auto train_t = torch::tensor(train);
auto test_t = torch::tensor(test);
// Get train and validation sets
X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), train_t });
y_train = dataset.index({ -1, train_t });
X_test = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), test_t });
y_test = dataset.index({ -1, test_t });
dataset = X_train;
m = X_train.size(1);
auto n_classes = states.at(className).size();
// Build dataset with train data
buildDataset(y_train);
metrics = Metrics(dataset, features, className, n_classes);
} else {
// Use all data to train
X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), "..." });
y_train = y_;
}
}
void BoostAODE::setHyperparameters(const nlohmann::json& hyperparameters_)
{
auto hyperparameters = hyperparameters_;
if (hyperparameters.contains("order")) {
std::vector<std::string> algos = { Orders.ASC, Orders.DESC, Orders.RAND };
order_algorithm = hyperparameters["order"];
if (std::find(algos.begin(), algos.end(), order_algorithm) == algos.end()) {
throw std::invalid_argument("Invalid order algorithm, valid values [" + Orders.ASC + ", " + Orders.DESC + ", " + Orders.RAND + "]");
}
hyperparameters.erase("order");
}
if (hyperparameters.contains("convergence")) {
convergence = hyperparameters["convergence"];
hyperparameters.erase("convergence");
}
if (hyperparameters.contains("convergence_best")) {
convergence_best = hyperparameters["convergence_best"];
hyperparameters.erase("convergence_best");
}
if (hyperparameters.contains("bisection")) {
bisection = hyperparameters["bisection"];
hyperparameters.erase("bisection");
}
if (hyperparameters.contains("threshold")) {
threshold = hyperparameters["threshold"];
hyperparameters.erase("threshold");
}
if (hyperparameters.contains("maxTolerance")) {
maxTolerance = hyperparameters["maxTolerance"];
if (maxTolerance < 1 || maxTolerance > 4)
throw std::invalid_argument("Invalid maxTolerance value, must be greater in [1, 4]");
hyperparameters.erase("maxTolerance");
}
if (hyperparameters.contains("predict_voting")) {
predict_voting = hyperparameters["predict_voting"];
hyperparameters.erase("predict_voting");
}
if (hyperparameters.contains("select_features")) {
auto selectedAlgorithm = hyperparameters["select_features"];
std::vector<std::string> algos = { SelectFeatures.IWSS, SelectFeatures.CFS, SelectFeatures.FCBF };
selectFeatures = true;
select_features_algorithm = selectedAlgorithm;
if (std::find(algos.begin(), algos.end(), selectedAlgorithm) == algos.end()) {
throw std::invalid_argument("Invalid selectFeatures value, valid values [" + SelectFeatures.IWSS + ", " + SelectFeatures.CFS + ", " + SelectFeatures.FCBF + "]");
}
hyperparameters.erase("select_features");
}
if (hyperparameters.contains("block_update")) {
block_update = hyperparameters["block_update"];
hyperparameters.erase("block_update");
}
Classifier::setHyperparameters(hyperparameters);
}
std::tuple<torch::Tensor&, double, bool> update_weights(torch::Tensor& ytrain, torch::Tensor& ypred, torch::Tensor& weights)
{
bool terminate = false;
double alpha_t = 0;
auto mask_wrong = ypred != ytrain;
auto mask_right = ypred == ytrain;
auto masked_weights = weights * mask_wrong.to(weights.dtype());
double epsilon_t = masked_weights.sum().item<double>();
if (epsilon_t > 0.5) {
// Inverse the weights policy (plot ln(wt))
// "In each round of AdaBoost, there is a sanity check to ensure that the current base
// learner is better than random guess" (Zhi-Hua Zhou, 2012)
terminate = true;
} else {
double wt = (1 - epsilon_t) / epsilon_t;
alpha_t = epsilon_t == 0 ? 1 : 0.5 * log(wt);
// Step 3.2: Update weights for next classifier
// Step 3.2.1: Update weights of wrong samples
weights += mask_wrong.to(weights.dtype()) * exp(alpha_t) * weights;
// Step 3.2.2: Update weights of right samples
weights += mask_right.to(weights.dtype()) * exp(-alpha_t) * weights;
// Step 3.3: Normalise the weights
double totalWeights = torch::sum(weights).item<double>();
weights = weights / totalWeights;
}
return { weights, alpha_t, terminate };
}
std::tuple<torch::Tensor&, double, bool> BoostAODE::update_weights_block(int k, torch::Tensor& ytrain, torch::Tensor& weights)
{
/* Update Block algorithm
k = # of models in block
n_models = # of models in ensemble to make predictions
n_models_bak = # models saved
models = vector of models to make predictions
models_bak = models not used to make predictions
significances_bak = backup of significances vector
Case list
A) k = 1, n_models = 1 => n = 0 , n_models = n + k
B) k = 1, n_models = n + 1 => n_models = n + k
C) k > 1, n_models = k + 1 => n= 1, n_models = n + k
D) k > 1, n_models = k => n = 0, n_models = n + k
E) k > 1, n_models = k + n => n_models = n + k
A, D) n=0, k > 0, n_models == k
1. n_models_bak <- n_models
2. significances_bak <- significances
3. significances = vector(k, 1)
4. Dont move any classifiers out of models
5. n_models <- k
6. Make prediction, compute alpha, update weights
7. Dont restore any classifiers to models
8. significances <- significances_bak
9. Update last k significances
10. n_models <- n_models_bak
B, C, E) n > 0, k > 0, n_models == n + k
1. n_models_bak <- n_models
2. significances_bak <- significances
3. significances = vector(k, 1)
4. Move first n classifiers to models_bak
5. n_models <- k
6. Make prediction, compute alpha, update weights
7. Insert classifiers in models_bak to be the first n models
8. significances <- significances_bak
9. Update last k significances
10. n_models <- n_models_bak
*/
//
// Make predict with only the last k models
//
std::unique_ptr<Classifier> model;
std::vector<std::unique_ptr<Classifier>> models_bak;
// 1. n_models_bak <- n_models 2. significances_bak <- significances
auto significance_bak = significanceModels;
auto n_models_bak = n_models;
// 3. significances = vector(k, 1)
significanceModels = std::vector<double>(k, 1.0);
// 4. Move first n classifiers to models_bak
// backup the first n_models - k models (if n_models == k, don't backup any)
for (int i = 0; i < n_models - k; ++i) {
model = std::move(models[0]);
models.erase(models.begin());
models_bak.push_back(std::move(model));
}
assert(models.size() == k);
// 5. n_models <- k
n_models = k;
// 6. Make prediction, compute alpha, update weights
auto ypred = predict(X_train);
//
// Update weights
//
double alpha_t;
bool terminate;
std::tie(weights, alpha_t, terminate) = update_weights(y_train, ypred, weights);
//
// Restore the models if needed
//
// 7. Insert classifiers in models_bak to be the first n models
// if n_models_bak == k, don't restore any, because none of them were moved
if (k != n_models_bak) {
// Insert in the same order as they were extracted
int bak_size = models_bak.size();
for (int i = 0; i < bak_size; ++i) {
model = std::move(models_bak[bak_size - 1 - i]);
models_bak.erase(models_bak.end() - 1);
models.insert(models.begin(), std::move(model));
}
}
// 8. significances <- significances_bak
significanceModels = significance_bak;
//
// Update the significance of the last k models
//
// 9. Update last k significances
for (int i = 0; i < k; ++i) {
significanceModels[n_models_bak - k + i] = alpha_t;
}
// 10. n_models <- n_models_bak
n_models = n_models_bak;
return { weights, alpha_t, terminate };
}
std::vector<int> BoostAODE::initializeModels()
{
std::vector<int> featuresUsed;
torch::Tensor weights_ = torch::full({ m }, 1.0 / m, torch::kFloat64);
int maxFeatures = 0;
if (select_features_algorithm == SelectFeatures.CFS) {
featureSelector = new CFS(dataset, features, className, maxFeatures, states.at(className).size(), weights_);
} else if (select_features_algorithm == SelectFeatures.IWSS) {
if (threshold < 0 || threshold >0.5) {
throw std::invalid_argument("Invalid threshold value for " + SelectFeatures.IWSS + " [0, 0.5]");
}
featureSelector = new IWSS(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);
} else if (select_features_algorithm == SelectFeatures.FCBF) {
if (threshold < 1e-7 || threshold > 1) {
throw std::invalid_argument("Invalid threshold value for " + SelectFeatures.FCBF + " [1e-7, 1]");
}
featureSelector = new FCBF(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);
}
featureSelector->fit();
auto cfsFeatures = featureSelector->getFeatures();
auto scores = featureSelector->getScores();
for (const int& feature : cfsFeatures) {
featuresUsed.push_back(feature);
std::vector<int> featuresSelected = featureSelection(weights_);
for (const int& feature : featuresSelected) {
std::unique_ptr<Classifier> model = std::make_unique<SPODE>(feature);
model->fit(dataset, features, className, states, weights_);
models.push_back(std::move(model));
significanceModels.push_back(1.0); // They will be updated later in trainModel
n_models++;
}
notes.push_back("Used features in initialization: " + std::to_string(featuresUsed.size()) + " of " + std::to_string(features.size()) + " with " + select_features_algorithm);
delete featureSelector;
return featuresUsed;
notes.push_back("Used features in initialization: " + std::to_string(featuresSelected.size()) + " of " + std::to_string(features.size()) + " with " + select_features_algorithm);
return featuresSelected;
}
void BoostAODE::trainModel(const torch::Tensor& weights)
{
//
// Logging setup
//
loguru::set_thread_name("BoostAODE");
loguru::g_stderr_verbosity = loguru::Verbosity_OFF;
loguru::add_file("boostAODE.log", loguru::Truncate, loguru::Verbosity_MAX);
// loguru::set_thread_name("BoostAODE");
// loguru::g_stderr_verbosity = loguru::Verbosity_OFF;
// loguru::add_file("boostAODE.log", loguru::Truncate, loguru::Verbosity_MAX);
// Algorithm based on the adaboost algorithm for classification
// as explained in Ensemble methods (Zhi-Hua Zhou, 2012)
@@ -318,7 +83,7 @@ namespace bayesnet {
);
int k = bisection ? pow(2, tolerance) : 1;
int counter = 0; // The model counter of the current pack
VLOG_SCOPE_F(1, "counter=%d k=%d featureSelection.size: %zu", counter, k, featureSelection.size());
// VLOG_SCOPE_F(1, "counter=%d k=%d featureSelection.size: %zu", counter, k, featureSelection.size());
while (counter++ < k && featureSelection.size() > 0) {
auto feature = featureSelection[0];
featureSelection.erase(featureSelection.begin());
@@ -337,7 +102,7 @@ namespace bayesnet {
models.push_back(std::move(model));
significanceModels.push_back(alpha_t);
n_models++;
VLOG_SCOPE_F(2, "numItemsPack: %d n_models: %d featuresUsed: %zu", numItemsPack, n_models, featuresUsed.size());
// VLOG_SCOPE_F(2, "numItemsPack: %d n_models: %d featuresUsed: %zu", numItemsPack, n_models, featuresUsed.size());
}
if (block_update) {
std::tie(weights_, alpha_t, finished) = update_weights_block(k, y_train, weights_);
@@ -351,10 +116,10 @@ namespace bayesnet {
improvement = accuracy - priorAccuracy;
}
if (improvement < convergence_threshold) {
VLOG_SCOPE_F(3, " (improvement<threshold) tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f", tolerance, numItemsPack, improvement, priorAccuracy, accuracy);
// VLOG_SCOPE_F(3, " (improvement<threshold) tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f", tolerance, numItemsPack, improvement, priorAccuracy, accuracy);
tolerance++;
} else {
VLOG_SCOPE_F(3, "* (improvement>=threshold) Reset. tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f", tolerance, numItemsPack, improvement, priorAccuracy, accuracy);
// VLOG_SCOPE_F(3, "* (improvement>=threshold) Reset. tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f", tolerance, numItemsPack, improvement, priorAccuracy, accuracy);
tolerance = 0; // Reset the counter if the model performs better
numItemsPack = 0;
}
@@ -366,13 +131,13 @@ namespace bayesnet {
priorAccuracy = accuracy;
}
}
VLOG_SCOPE_F(1, "tolerance: %d featuresUsed.size: %zu features.size: %zu", tolerance, featuresUsed.size(), features.size());
// VLOG_SCOPE_F(1, "tolerance: %d featuresUsed.size: %zu features.size: %zu", tolerance, featuresUsed.size(), features.size());
finished = finished || tolerance > maxTolerance || featuresUsed.size() == features.size();
}
if (tolerance > maxTolerance) {
if (numItemsPack < n_models) {
notes.push_back("Convergence threshold reached & " + std::to_string(numItemsPack) + " models eliminated");
VLOG_SCOPE_F(4, "Convergence threshold reached & %d models eliminated of %d", numItemsPack, n_models);
// VLOG_SCOPE_F(4, "Convergence threshold reached & %d models eliminated of %d", numItemsPack, n_models);
for (int i = 0; i < numItemsPack; ++i) {
significanceModels.pop_back();
models.pop_back();
@@ -380,7 +145,7 @@ namespace bayesnet {
}
} else {
notes.push_back("Convergence threshold reached & 0 models eliminated");
VLOG_SCOPE_F(4, "Convergence threshold reached & 0 models eliminated n_models=%d numItemsPack=%d", n_models, numItemsPack);
// VLOG_SCOPE_F(4, "Convergence threshold reached & 0 models eliminated n_models=%d numItemsPack=%d", n_models, numItemsPack);
}
}
if (featuresUsed.size() != features.size()) {

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@@ -6,45 +6,21 @@
#ifndef BOOSTAODE_H
#define BOOSTAODE_H
#include <map>
#include <string>
#include <vector>
#include "bayesnet/classifiers/SPODE.h"
#include "bayesnet/feature_selection/FeatureSelect.h"
#include "Ensemble.h"
#include "Boost.h"
namespace bayesnet {
const struct {
std::string CFS = "CFS";
std::string FCBF = "FCBF";
std::string IWSS = "IWSS";
}SelectFeatures;
const struct {
std::string ASC = "asc";
std::string DESC = "desc";
std::string RAND = "rand";
}Orders;
class BoostAODE : public Ensemble {
class BoostAODE : public Boost {
public:
explicit BoostAODE(bool predict_voting = false);
virtual ~BoostAODE() = default;
std::vector<std::string> graph(const std::string& title = "BoostAODE") const override;
void setHyperparameters(const nlohmann::json& hyperparameters_) override;
protected:
void buildModel(const torch::Tensor& weights) override;
void trainModel(const torch::Tensor& weights) override;
private:
std::tuple<torch::Tensor&, double, bool> update_weights_block(int k, torch::Tensor& ytrain, torch::Tensor& weights);
std::vector<int> initializeModels();
torch::Tensor X_train, y_train, X_test, y_test;
// Hyperparameters
bool bisection = true; // if true, use bisection stratety to add k models at once to the ensemble
int maxTolerance = 3;
std::string order_algorithm; // order to process the KBest features asc, desc, rand
bool convergence = true; //if true, stop when the model does not improve
bool convergence_best = false; // wether to keep the best accuracy to the moment or the last accuracy as prior accuracy
bool selectFeatures = false; // if true, use feature selection
std::string select_features_algorithm = Orders.DESC; // Selected feature selection algorithm
FeatureSelect* featureSelector = nullptr;
double threshold = -1;
bool block_update = false;
};
}
#endif

View File

@@ -9,7 +9,7 @@
namespace bayesnet {
Node::Node(const std::string& name)
: name(name), numStates(0), cpTable(torch::Tensor()), parents(std::vector<Node*>()), children(std::vector<Node*>())
: name(name)
{
}
void Node::clear()
@@ -96,7 +96,6 @@ namespace bayesnet {
// Get dimensions of the CPT
dimensions.push_back(numStates);
transform(parents.begin(), parents.end(), back_inserter(dimensions), [](const auto& parent) { return parent->getNumStates(); });
// Create a tensor of zeros with the dimensions of the CPT
cpTable = torch::zeros(dimensions, torch::kFloat) + laplaceSmoothing;
// Fill table with counts

View File

@@ -12,14 +12,6 @@
#include <torch/torch.h>
namespace bayesnet {
class Node {
private:
std::string name;
std::vector<Node*> parents;
std::vector<Node*> children;
int numStates; // number of states of the variable
torch::Tensor cpTable; // Order of indices is 0-> node variable, 1-> 1st parent, 2-> 2nd parent, ...
std::vector<int64_t> dimensions; // dimensions of the cpTable
std::vector<std::pair<std::string, std::string>> combinations(const std::vector<std::string>&);
public:
explicit Node(const std::string&);
void clear();
@@ -37,6 +29,14 @@ namespace bayesnet {
unsigned minFill();
std::vector<std::string> graph(const std::string& clasName); // Returns a std::vector of std::strings representing the graph in graphviz format
float getFactorValue(std::map<std::string, int>&);
private:
std::string name;
std::vector<Node*> parents;
std::vector<Node*> children;
int numStates = 0; // number of states of the variable
torch::Tensor cpTable; // Order of indices is 0-> node variable, 1-> 1st parent, 2-> 2nd parent, ...
std::vector<int64_t> dimensions; // dimensions of the cpTable
std::vector<std::pair<std::string, std::string>> combinations(const std::vector<std::string>&);
};
}
#endif

View File

@@ -4,6 +4,9 @@
// SPDX-License-Identifier: MIT
// ***************************************************************
#include <map>
#include <unordered_map>
#include <tuple>
#include "Mst.h"
#include "BayesMetrics.h"
namespace bayesnet {
@@ -27,6 +30,53 @@ namespace bayesnet {
}
samples.index_put_({ -1, "..." }, torch::tensor(labels, torch::kInt32));
}
std::vector<std::pair<int, int>> Metrics::SelectKPairs(const torch::Tensor& weights, std::vector<int>& featuresExcluded, bool ascending, unsigned k)
{
// Return the K Best features
auto n = features.size();
// compute scores
scoresKPairs.clear();
pairsKBest.clear();
auto labels = samples.index({ -1, "..." });
for (int i = 0; i < n - 1; ++i) {
if (std::find(featuresExcluded.begin(), featuresExcluded.end(), i) != featuresExcluded.end()) {
continue;
}
for (int j = i + 1; j < n; ++j) {
if (std::find(featuresExcluded.begin(), featuresExcluded.end(), j) != featuresExcluded.end()) {
continue;
}
auto key = std::make_pair(i, j);
auto value = conditionalMutualInformation(samples.index({ i, "..." }), samples.index({ j, "..." }), labels, weights);
scoresKPairs.push_back({ key, value });
}
}
// sort scores
if (ascending) {
sort(scoresKPairs.begin(), scoresKPairs.end(), [](auto& a, auto& b)
{ return a.second < b.second; });
} else {
sort(scoresKPairs.begin(), scoresKPairs.end(), [](auto& a, auto& b)
{ return a.second > b.second; });
}
for (auto& [pairs, score] : scoresKPairs) {
pairsKBest.push_back(pairs);
}
if (k != 0 && k < pairsKBest.size()) {
if (ascending) {
int limit = pairsKBest.size() - k;
for (int i = 0; i < limit; i++) {
pairsKBest.erase(pairsKBest.begin());
scoresKPairs.erase(scoresKPairs.begin());
}
} else {
pairsKBest.resize(k);
scoresKPairs.resize(k);
}
}
return pairsKBest;
}
std::vector<int> Metrics::SelectKBestWeighted(const torch::Tensor& weights, bool ascending, unsigned k)
{
// Return the K Best features
@@ -66,7 +116,10 @@ namespace bayesnet {
{
return scoresKBest;
}
std::vector<std::pair<std::pair<int, int>, double>> Metrics::getScoresKPairs() const
{
return scoresKPairs;
}
torch::Tensor Metrics::conditionalEdge(const torch::Tensor& weights)
{
auto result = std::vector<double>();
@@ -105,6 +158,8 @@ namespace bayesnet {
}
return matrix;
}
// Measured in nats (natural logarithm (log) base e)
// Elements of Information Theory, 2nd Edition, Thomas M. Cover, Joy A. Thomas p. 14
double Metrics::entropy(const torch::Tensor& feature, const torch::Tensor& weights)
{
torch::Tensor counts = feature.bincount(weights);
@@ -143,10 +198,54 @@ namespace bayesnet {
}
return entropyValue;
}
// I(X;Y) = H(Y) - H(Y|X)
// H(X|Y,C) = sum_{y in Y, c in C} p(x,c) H(X|Y=y,C=c)
double Metrics::conditionalEntropy(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& labels, const torch::Tensor& weights)
{
// Ensure the tensors are of the same length
assert(firstFeature.size(0) == secondFeature.size(0) && firstFeature.size(0) == labels.size(0) && firstFeature.size(0) == weights.size(0));
// Convert tensors to vectors for easier processing
auto firstFeatureData = firstFeature.accessor<int, 1>();
auto secondFeatureData = secondFeature.accessor<int, 1>();
auto labelsData = labels.accessor<int, 1>();
auto weightsData = weights.accessor<double, 1>();
int numSamples = firstFeature.size(0);
// Maps for joint and marginal probabilities
std::map<std::tuple<int, int, int>, double> jointCount;
std::map<std::tuple<int, int>, double> marginalCount;
// Compute joint and marginal counts
for (int i = 0; i < numSamples; ++i) {
auto keyJoint = std::make_tuple(firstFeatureData[i], labelsData[i], secondFeatureData[i]);
auto keyMarginal = std::make_tuple(firstFeatureData[i], labelsData[i]);
jointCount[keyJoint] += weightsData[i];
marginalCount[keyMarginal] += weightsData[i];
}
// Total weight sum
double totalWeight = torch::sum(weights).item<double>();
if (totalWeight == 0)
return 0;
// Compute the conditional entropy
double conditionalEntropy = 0.0;
for (const auto& [keyJoint, jointFreq] : jointCount) {
auto [x, c, y] = keyJoint;
auto keyMarginal = std::make_tuple(x, c);
//double p_xc = marginalCount[keyMarginal] / totalWeight;
double p_y_given_xc = jointFreq / marginalCount[keyMarginal];
if (p_y_given_xc > 0) {
conditionalEntropy -= (jointFreq / totalWeight) * std::log(p_y_given_xc);
}
}
return conditionalEntropy;
}
// I(X;Y) = H(Y) - H(Y|X) ; I(X;Y) >= 0
double Metrics::mutualInformation(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& weights)
{
return entropy(firstFeature, weights) - conditionalEntropy(firstFeature, secondFeature, weights);
return std::max(entropy(firstFeature, weights) - conditionalEntropy(firstFeature, secondFeature, weights), 0.0);
}
// I(X;Y|C) = H(X|C) - H(X|Y,C) >= 0
double Metrics::conditionalMutualInformation(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& labels, const torch::Tensor& weights)
{
return std::max(conditionalEntropy(firstFeature, labels, weights) - conditionalEntropy(firstFeature, secondFeature, labels, weights), 0.0);
}
/*
Compute the maximum spanning tree considering the weights as distances

View File

@@ -16,20 +16,26 @@ namespace bayesnet {
Metrics(const torch::Tensor& samples, const std::vector<std::string>& features, const std::string& className, const int classNumStates);
Metrics(const std::vector<std::vector<int>>& vsamples, const std::vector<int>& labels, const std::vector<std::string>& features, const std::string& className, const int classNumStates);
std::vector<int> SelectKBestWeighted(const torch::Tensor& weights, bool ascending = false, unsigned k = 0);
std::vector<std::pair<int, int>> SelectKPairs(const torch::Tensor& weights, std::vector<int>& featuresExcluded, bool ascending = false, unsigned k = 0);
std::vector<double> getScoresKBest() const;
std::vector<std::pair<std::pair<int, int>, double>> getScoresKPairs() const;
double mutualInformation(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& weights);
double conditionalMutualInformation(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& labels, const torch::Tensor& weights);
torch::Tensor conditionalEdge(const torch::Tensor& weights);
std::vector<std::pair<int, int>> maximumSpanningTree(const std::vector<std::string>& features, const torch::Tensor& weights, const int root);
// Measured in nats (natural logarithm (log) base e)
// Elements of Information Theory, 2nd Edition, Thomas M. Cover, Joy A. Thomas p. 14
double entropy(const torch::Tensor& feature, const torch::Tensor& weights);
double conditionalEntropy(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& labels, const torch::Tensor& weights);
protected:
torch::Tensor samples; // n+1xm torch::Tensor used to fit the model where samples[-1] is the y std::vector
std::string className;
double entropy(const torch::Tensor& feature, const torch::Tensor& weights);
std::vector<std::string> features;
template <class T>
std::vector<std::pair<T, T>> doCombinations(const std::vector<T>& source)
{
std::vector<std::pair<T, T>> result;
for (int i = 0; i < source.size(); ++i) {
for (int i = 0; i < source.size() - 1; ++i) {
T temp = source[i];
for (int j = i + 1; j < source.size(); ++j) {
result.push_back({ temp, source[j] });
@@ -48,6 +54,8 @@ namespace bayesnet {
int classNumStates = 0;
std::vector<double> scoresKBest;
std::vector<int> featuresKBest; // sorted indices of the features
std::vector<std::pair<int, int>> pairsKBest; // sorted indices of the pairs
std::vector<std::pair<std::pair<int, int>, double>> scoresKPairs;
double conditionalEntropy(const torch::Tensor& firstFeature, const torch::Tensor& secondFeature, const torch::Tensor& weights);
};
}

View File

@@ -5,7 +5,7 @@
The hyperparameters defined in the algorithm are:
- ***bisection*** (*boolean*): If set to true allows the algorithm to add *k* models at once (as specified in the algorithm) to the ensemble. Default value: *true*.
- ***biesection_best*** (*boolean*): If set to *true*, the algorithm will take as *priorAccuracy* the best accuracy computed. If set to *false⁺ it will take the last accuracy as *priorAccuracy*. Default value: *false*.
- ***bisection_best*** (*boolean*): If set to *true*, the algorithm will take as *priorAccuracy* the best accuracy computed. If set to *false⁺ it will take the last accuracy as *priorAccuracy*. Default value: *false*.
- ***order*** (*{"asc", "desc", "rand"}*): Sets the order (ascending/descending/random) in which dataset variables will be processed to choose the parents of the *SPODEs*. Default value: *"desc"*.
@@ -27,4 +27,4 @@ The hyperparameters defined in the algorithm are:
## Operation
### [Algorithm](./algorithm.md)
### [Base Algorithm](./algorithm.md)

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filter = bayesnet/
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerCovTableEntryLo">50.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerCovTableEntry">1</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerCovTableEntryLo">50.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<td class="headerValue">coverage.info</td>
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<td class="headerCovTableEntry">1</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerCovTableEntryLo">50.0&nbsp;%</td>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #pragma once</span>
<span id="L8"><span class="lineNum"> 8</span> : #include &lt;vector&gt;</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &lt;torch/torch.h&gt;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &lt;nlohmann/json.hpp&gt;</span>
<span id="L11"><span class="lineNum"> 11</span> : namespace bayesnet {</span>
<span id="L12"><span class="lineNum"> 12</span> : enum status_t { NORMAL, WARNING, ERROR };</span>
<span id="L13"><span class="lineNum"> 13</span> : class BaseClassifier {</span>
<span id="L14"><span class="lineNum"> 14</span> : public:</span>
<span id="L15"><span class="lineNum"> 15</span> : // X is nxm std::vector, y is nx1 std::vector</span>
<span id="L16"><span class="lineNum"> 16</span> : virtual BaseClassifier&amp; fit(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X, std::vector&lt;int&gt;&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) = 0;</span>
<span id="L17"><span class="lineNum"> 17</span> : // X is nxm tensor, y is nx1 tensor</span>
<span id="L18"><span class="lineNum"> 18</span> : virtual BaseClassifier&amp; fit(torch::Tensor&amp; X, torch::Tensor&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) = 0;</span>
<span id="L19"><span class="lineNum"> 19</span> : virtual BaseClassifier&amp; fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) = 0;</span>
<span id="L20"><span class="lineNum"> 20</span> : virtual BaseClassifier&amp; fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states, const torch::Tensor&amp; weights) = 0;</span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaGNC tlaBgGNC"> 606 : virtual ~BaseClassifier() = default;</span></span>
<span id="L22"><span class="lineNum"> 22</span> : torch::Tensor virtual predict(torch::Tensor&amp; X) = 0;</span>
<span id="L23"><span class="lineNum"> 23</span> : std::vector&lt;int&gt; virtual predict(std::vector&lt;std::vector&lt;int &gt;&gt;&amp; X) = 0;</span>
<span id="L24"><span class="lineNum"> 24</span> : torch::Tensor virtual predict_proba(torch::Tensor&amp; X) = 0;</span>
<span id="L25"><span class="lineNum"> 25</span> : std::vector&lt;std::vector&lt;double&gt;&gt; virtual predict_proba(std::vector&lt;std::vector&lt;int &gt;&gt;&amp; X) = 0;</span>
<span id="L26"><span class="lineNum"> 26</span> : status_t virtual getStatus() const = 0;</span>
<span id="L27"><span class="lineNum"> 27</span> : float virtual score(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X, std::vector&lt;int&gt;&amp; y) = 0;</span>
<span id="L28"><span class="lineNum"> 28</span> : float virtual score(torch::Tensor&amp; X, torch::Tensor&amp; y) = 0;</span>
<span id="L29"><span class="lineNum"> 29</span> : int virtual getNumberOfNodes()const = 0;</span>
<span id="L30"><span class="lineNum"> 30</span> : int virtual getNumberOfEdges()const = 0;</span>
<span id="L31"><span class="lineNum"> 31</span> : int virtual getNumberOfStates() const = 0;</span>
<span id="L32"><span class="lineNum"> 32</span> : int virtual getClassNumStates() const = 0;</span>
<span id="L33"><span class="lineNum"> 33</span> : std::vector&lt;std::string&gt; virtual show() const = 0;</span>
<span id="L34"><span class="lineNum"> 34</span> : std::vector&lt;std::string&gt; virtual graph(const std::string&amp; title = &quot;&quot;) const = 0;</span>
<span id="L35"><span class="lineNum"> 35</span> : virtual std::string getVersion() = 0;</span>
<span id="L36"><span class="lineNum"> 36</span> : std::vector&lt;std::string&gt; virtual topological_order() = 0;</span>
<span id="L37"><span class="lineNum"> 37</span> : std::vector&lt;std::string&gt; virtual getNotes() const = 0;</span>
<span id="L38"><span class="lineNum"> 38</span> : std::string virtual dump_cpt()const = 0;</span>
<span id="L39"><span class="lineNum"> 39</span> : virtual void setHyperparameters(const nlohmann::json&amp; hyperparameters) = 0;</span>
<span id="L40"><span class="lineNum"> 40</span> : std::vector&lt;std::string&gt;&amp; getValidHyperparameters() { return validHyperparameters; }</span>
<span id="L41"><span class="lineNum"> 41</span> : protected:</span>
<span id="L42"><span class="lineNum"> 42</span> : virtual void trainModel(const torch::Tensor&amp; weights) = 0;</span>
<span id="L43"><span class="lineNum"> 43</span> : std::vector&lt;std::string&gt; validHyperparameters;</span>
<span id="L44"><span class="lineNum"> 44</span> : };</span>
<span id="L45"><span class="lineNum"> 45</span> : }</span>
</pre>
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<td width="5%"></td>
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<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
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<td class="headerCovTableEntry">126</td>
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<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">126</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">24</td>
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<td class="coverFnHi">560</td>
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<td class="coverFn"><a href="Classifier.cc.gcov.html#L10">_ZN8bayesnet10ClassifierC2ENS_7NetworkE</a></td>
<td class="coverFnHi">886</td>
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<td class="coverFnHi">94</td>
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<td class="coverFnHi">94</td>
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<td class="coverFn"><a href="Classifier.cc.gcov.html#L174">_ZNK8bayesnet10Classifier17getClassNumStatesEv</a></td>
<td class="coverFnHi">170</td>
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<td class="coverFn"><a href="Classifier.cc.gcov.html#L170">_ZNK8bayesnet10Classifier17getNumberOfStatesEv</a></td>
<td class="coverFnHi">12</td>
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<td class="coverFn"><a href="Classifier.cc.gcov.html#L149">_ZNK8bayesnet10Classifier4showB5cxx11Ev</a></td>
<td class="coverFnHi">12</td>
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<td class="coverFn"><a href="Classifier.cc.gcov.html#L182">_ZNK8bayesnet10Classifier8dump_cptB5cxx11Ev</a></td>
<td class="coverFnHi">2</td>
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@@ -1,270 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/Classifier.cc</title>
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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">126</td>
<td class="headerCovTableEntry">126</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">24</td>
<td class="headerCovTableEntry">24</td>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &lt;sstream&gt;</span>
<span id="L8"><span class="lineNum"> 8</span> : #include &quot;bayesnet/utils/bayesnetUtils.h&quot;</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;Classifier.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : </span>
<span id="L11"><span class="lineNum"> 11</span> : namespace bayesnet {</span>
<span id="L12"><span class="lineNum"> 12</span> <span class="tlaGNC tlaBgGNC"> 886 : Classifier::Classifier(Network model) : model(model), m(0), n(0), metrics(Metrics()), fitted(false) {}</span></span>
<span id="L13"><span class="lineNum"> 13</span> : const std::string CLASSIFIER_NOT_FITTED = &quot;Classifier has not been fitted&quot;;</span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 644 : Classifier&amp; Classifier::build(const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states, const torch::Tensor&amp; weights)</span></span>
<span id="L15"><span class="lineNum"> 15</span> : {</span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC"> 644 : this-&gt;features = features;</span></span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 644 : this-&gt;className = className;</span></span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC"> 644 : this-&gt;states = states;</span></span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 644 : m = dataset.size(1);</span></span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC"> 644 : n = features.size();</span></span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaGNC"> 644 : checkFitParameters();</span></span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 628 : auto n_classes = states.at(className).size();</span></span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC"> 628 : metrics = Metrics(dataset, features, className, n_classes);</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 628 : model.initialize();</span></span>
<span id="L25"><span class="lineNum"> 25</span> <span class="tlaGNC"> 628 : buildModel(weights);</span></span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 628 : trainModel(weights);</span></span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 620 : fitted = true;</span></span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 620 : return *this;</span></span>
<span id="L29"><span class="lineNum"> 29</span> : }</span>
<span id="L30"><span class="lineNum"> 30</span> <span class="tlaGNC"> 162 : void Classifier::buildDataset(torch::Tensor&amp; ytmp)</span></span>
<span id="L31"><span class="lineNum"> 31</span> : {</span>
<span id="L32"><span class="lineNum"> 32</span> : try {</span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 162 : auto yresized = torch::transpose(ytmp.view({ ytmp.size(0), 1 }), 0, 1);</span></span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 502 : dataset = torch::cat({ dataset, yresized }, 0);</span></span>
<span id="L35"><span class="lineNum"> 35</span> <span class="tlaGNC"> 162 : }</span></span>
<span id="L36"><span class="lineNum"> 36</span> <span class="tlaGNC"> 8 : catch (const std::exception&amp; e) {</span></span>
<span id="L37"><span class="lineNum"> 37</span> <span class="tlaGNC"> 8 : std::stringstream oss;</span></span>
<span id="L38"><span class="lineNum"> 38</span> <span class="tlaGNC"> 8 : oss &lt;&lt; &quot;* Error in X and y dimensions *\n&quot;;</span></span>
<span id="L39"><span class="lineNum"> 39</span> <span class="tlaGNC"> 8 : oss &lt;&lt; &quot;X dimensions: &quot; &lt;&lt; dataset.sizes() &lt;&lt; &quot;\n&quot;;</span></span>
<span id="L40"><span class="lineNum"> 40</span> <span class="tlaGNC"> 8 : oss &lt;&lt; &quot;y dimensions: &quot; &lt;&lt; ytmp.sizes();</span></span>
<span id="L41"><span class="lineNum"> 41</span> <span class="tlaGNC"> 8 : throw std::runtime_error(oss.str());</span></span>
<span id="L42"><span class="lineNum"> 42</span> <span class="tlaGNC"> 16 : }</span></span>
<span id="L43"><span class="lineNum"> 43</span> <span class="tlaGNC"> 324 : }</span></span>
<span id="L44"><span class="lineNum"> 44</span> <span class="tlaGNC"> 560 : void Classifier::trainModel(const torch::Tensor&amp; weights)</span></span>
<span id="L45"><span class="lineNum"> 45</span> : {</span>
<span id="L46"><span class="lineNum"> 46</span> <span class="tlaGNC"> 560 : model.fit(dataset, weights, features, className, states);</span></span>
<span id="L47"><span class="lineNum"> 47</span> <span class="tlaGNC"> 560 : }</span></span>
<span id="L48"><span class="lineNum"> 48</span> : // X is nxm where n is the number of features and m the number of samples</span>
<span id="L49"><span class="lineNum"> 49</span> <span class="tlaGNC"> 64 : Classifier&amp; Classifier::fit(torch::Tensor&amp; X, torch::Tensor&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states)</span></span>
<span id="L50"><span class="lineNum"> 50</span> : {</span>
<span id="L51"><span class="lineNum"> 51</span> <span class="tlaGNC"> 64 : dataset = X;</span></span>
<span id="L52"><span class="lineNum"> 52</span> <span class="tlaGNC"> 64 : buildDataset(y);</span></span>
<span id="L53"><span class="lineNum"> 53</span> <span class="tlaGNC"> 60 : const torch::Tensor weights = torch::full({ dataset.size(1) }, 1.0 / dataset.size(1), torch::kDouble);</span></span>
<span id="L54"><span class="lineNum"> 54</span> <span class="tlaGNC"> 104 : return build(features, className, states, weights);</span></span>
<span id="L55"><span class="lineNum"> 55</span> <span class="tlaGNC"> 60 : }</span></span>
<span id="L56"><span class="lineNum"> 56</span> : // X is nxm where n is the number of features and m the number of samples</span>
<span id="L57"><span class="lineNum"> 57</span> <span class="tlaGNC"> 60 : Classifier&amp; Classifier::fit(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X, std::vector&lt;int&gt;&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states)</span></span>
<span id="L58"><span class="lineNum"> 58</span> : {</span>
<span id="L59"><span class="lineNum"> 59</span> <span class="tlaGNC"> 60 : dataset = torch::zeros({ static_cast&lt;int&gt;(X.size()), static_cast&lt;int&gt;(X[0].size()) }, torch::kInt32);</span></span>
<span id="L60"><span class="lineNum"> 60</span> <span class="tlaGNC"> 418 : for (int i = 0; i &lt; X.size(); ++i) {</span></span>
<span id="L61"><span class="lineNum"> 61</span> <span class="tlaGNC"> 1432 : dataset.index_put_({ i, &quot;...&quot; }, torch::tensor(X[i], torch::kInt32));</span></span>
<span id="L62"><span class="lineNum"> 62</span> : }</span>
<span id="L63"><span class="lineNum"> 63</span> <span class="tlaGNC"> 60 : auto ytmp = torch::tensor(y, torch::kInt32);</span></span>
<span id="L64"><span class="lineNum"> 64</span> <span class="tlaGNC"> 60 : buildDataset(ytmp);</span></span>
<span id="L65"><span class="lineNum"> 65</span> <span class="tlaGNC"> 56 : const torch::Tensor weights = torch::full({ dataset.size(1) }, 1.0 / dataset.size(1), torch::kDouble);</span></span>
<span id="L66"><span class="lineNum"> 66</span> <span class="tlaGNC"> 104 : return build(features, className, states, weights);</span></span>
<span id="L67"><span class="lineNum"> 67</span> <span class="tlaGNC"> 426 : }</span></span>
<span id="L68"><span class="lineNum"> 68</span> <span class="tlaGNC"> 198 : Classifier&amp; Classifier::fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states)</span></span>
<span id="L69"><span class="lineNum"> 69</span> : {</span>
<span id="L70"><span class="lineNum"> 70</span> <span class="tlaGNC"> 198 : this-&gt;dataset = dataset;</span></span>
<span id="L71"><span class="lineNum"> 71</span> <span class="tlaGNC"> 198 : const torch::Tensor weights = torch::full({ dataset.size(1) }, 1.0 / dataset.size(1), torch::kDouble);</span></span>
<span id="L72"><span class="lineNum"> 72</span> <span class="tlaGNC"> 396 : return build(features, className, states, weights);</span></span>
<span id="L73"><span class="lineNum"> 73</span> <span class="tlaGNC"> 198 : }</span></span>
<span id="L74"><span class="lineNum"> 74</span> <span class="tlaGNC"> 330 : Classifier&amp; Classifier::fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states, const torch::Tensor&amp; weights)</span></span>
<span id="L75"><span class="lineNum"> 75</span> : {</span>
<span id="L76"><span class="lineNum"> 76</span> <span class="tlaGNC"> 330 : this-&gt;dataset = dataset;</span></span>
<span id="L77"><span class="lineNum"> 77</span> <span class="tlaGNC"> 330 : return build(features, className, states, weights);</span></span>
<span id="L78"><span class="lineNum"> 78</span> : }</span>
<span id="L79"><span class="lineNum"> 79</span> <span class="tlaGNC"> 644 : void Classifier::checkFitParameters()</span></span>
<span id="L80"><span class="lineNum"> 80</span> : {</span>
<span id="L81"><span class="lineNum"> 81</span> <span class="tlaGNC"> 644 : if (torch::is_floating_point(dataset)) {</span></span>
<span id="L82"><span class="lineNum"> 82</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;dataset (X, y) must be of type Integer&quot;);</span></span>
<span id="L83"><span class="lineNum"> 83</span> : }</span>
<span id="L84"><span class="lineNum"> 84</span> <span class="tlaGNC"> 640 : if (dataset.size(0) - 1 != features.size()) {</span></span>
<span id="L85"><span class="lineNum"> 85</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;Classifier: X &quot; + std::to_string(dataset.size(0) - 1) + &quot; and features &quot; + std::to_string(features.size()) + &quot; must have the same number of features&quot;);</span></span>
<span id="L86"><span class="lineNum"> 86</span> : }</span>
<span id="L87"><span class="lineNum"> 87</span> <span class="tlaGNC"> 636 : if (states.find(className) == states.end()) {</span></span>
<span id="L88"><span class="lineNum"> 88</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;class name not found in states&quot;);</span></span>
<span id="L89"><span class="lineNum"> 89</span> : }</span>
<span id="L90"><span class="lineNum"> 90</span> <span class="tlaGNC"> 14208 : for (auto feature : features) {</span></span>
<span id="L91"><span class="lineNum"> 91</span> <span class="tlaGNC"> 13580 : if (states.find(feature) == states.end()) {</span></span>
<span id="L92"><span class="lineNum"> 92</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;feature [&quot; + feature + &quot;] not found in states&quot;);</span></span>
<span id="L93"><span class="lineNum"> 93</span> : }</span>
<span id="L94"><span class="lineNum"> 94</span> <span class="tlaGNC"> 13580 : }</span></span>
<span id="L95"><span class="lineNum"> 95</span> <span class="tlaGNC"> 628 : }</span></span>
<span id="L96"><span class="lineNum"> 96</span> <span class="tlaGNC"> 850 : torch::Tensor Classifier::predict(torch::Tensor&amp; X)</span></span>
<span id="L97"><span class="lineNum"> 97</span> : {</span>
<span id="L98"><span class="lineNum"> 98</span> <span class="tlaGNC"> 850 : if (!fitted) {</span></span>
<span id="L99"><span class="lineNum"> 99</span> <span class="tlaGNC"> 8 : throw std::logic_error(CLASSIFIER_NOT_FITTED);</span></span>
<span id="L100"><span class="lineNum"> 100</span> : }</span>
<span id="L101"><span class="lineNum"> 101</span> <span class="tlaGNC"> 842 : return model.predict(X);</span></span>
<span id="L102"><span class="lineNum"> 102</span> : }</span>
<span id="L103"><span class="lineNum"> 103</span> <span class="tlaGNC"> 8 : std::vector&lt;int&gt; Classifier::predict(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X)</span></span>
<span id="L104"><span class="lineNum"> 104</span> : {</span>
<span id="L105"><span class="lineNum"> 105</span> <span class="tlaGNC"> 8 : if (!fitted) {</span></span>
<span id="L106"><span class="lineNum"> 106</span> <span class="tlaGNC"> 4 : throw std::logic_error(CLASSIFIER_NOT_FITTED);</span></span>
<span id="L107"><span class="lineNum"> 107</span> : }</span>
<span id="L108"><span class="lineNum"> 108</span> <span class="tlaGNC"> 4 : auto m_ = X[0].size();</span></span>
<span id="L109"><span class="lineNum"> 109</span> <span class="tlaGNC"> 4 : auto n_ = X.size();</span></span>
<span id="L110"><span class="lineNum"> 110</span> <span class="tlaGNC"> 4 : std::vector&lt;std::vector&lt;int&gt;&gt; Xd(n_, std::vector&lt;int&gt;(m_, 0));</span></span>
<span id="L111"><span class="lineNum"> 111</span> <span class="tlaGNC"> 20 : for (auto i = 0; i &lt; n_; i++) {</span></span>
<span id="L112"><span class="lineNum"> 112</span> <span class="tlaGNC"> 32 : Xd[i] = std::vector&lt;int&gt;(X[i].begin(), X[i].end());</span></span>
<span id="L113"><span class="lineNum"> 113</span> : }</span>
<span id="L114"><span class="lineNum"> 114</span> <span class="tlaGNC"> 4 : auto yp = model.predict(Xd);</span></span>
<span id="L115"><span class="lineNum"> 115</span> <span class="tlaGNC"> 8 : return yp;</span></span>
<span id="L116"><span class="lineNum"> 116</span> <span class="tlaGNC"> 4 : }</span></span>
<span id="L117"><span class="lineNum"> 117</span> <span class="tlaGNC"> 742 : torch::Tensor Classifier::predict_proba(torch::Tensor&amp; X)</span></span>
<span id="L118"><span class="lineNum"> 118</span> : {</span>
<span id="L119"><span class="lineNum"> 119</span> <span class="tlaGNC"> 742 : if (!fitted) {</span></span>
<span id="L120"><span class="lineNum"> 120</span> <span class="tlaGNC"> 4 : throw std::logic_error(CLASSIFIER_NOT_FITTED);</span></span>
<span id="L121"><span class="lineNum"> 121</span> : }</span>
<span id="L122"><span class="lineNum"> 122</span> <span class="tlaGNC"> 738 : return model.predict_proba(X);</span></span>
<span id="L123"><span class="lineNum"> 123</span> : }</span>
<span id="L124"><span class="lineNum"> 124</span> <span class="tlaGNC"> 130 : std::vector&lt;std::vector&lt;double&gt;&gt; Classifier::predict_proba(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X)</span></span>
<span id="L125"><span class="lineNum"> 125</span> : {</span>
<span id="L126"><span class="lineNum"> 126</span> <span class="tlaGNC"> 130 : if (!fitted) {</span></span>
<span id="L127"><span class="lineNum"> 127</span> <span class="tlaGNC"> 4 : throw std::logic_error(CLASSIFIER_NOT_FITTED);</span></span>
<span id="L128"><span class="lineNum"> 128</span> : }</span>
<span id="L129"><span class="lineNum"> 129</span> <span class="tlaGNC"> 126 : auto m_ = X[0].size();</span></span>
<span id="L130"><span class="lineNum"> 130</span> <span class="tlaGNC"> 126 : auto n_ = X.size();</span></span>
<span id="L131"><span class="lineNum"> 131</span> <span class="tlaGNC"> 126 : std::vector&lt;std::vector&lt;int&gt;&gt; Xd(n_, std::vector&lt;int&gt;(m_, 0));</span></span>
<span id="L132"><span class="lineNum"> 132</span> : // Convert to nxm vector</span>
<span id="L133"><span class="lineNum"> 133</span> <span class="tlaGNC"> 1080 : for (auto i = 0; i &lt; n_; i++) {</span></span>
<span id="L134"><span class="lineNum"> 134</span> <span class="tlaGNC"> 1908 : Xd[i] = std::vector&lt;int&gt;(X[i].begin(), X[i].end());</span></span>
<span id="L135"><span class="lineNum"> 135</span> : }</span>
<span id="L136"><span class="lineNum"> 136</span> <span class="tlaGNC"> 126 : auto yp = model.predict_proba(Xd);</span></span>
<span id="L137"><span class="lineNum"> 137</span> <span class="tlaGNC"> 252 : return yp;</span></span>
<span id="L138"><span class="lineNum"> 138</span> <span class="tlaGNC"> 126 : }</span></span>
<span id="L139"><span class="lineNum"> 139</span> <span class="tlaGNC"> 56 : float Classifier::score(torch::Tensor&amp; X, torch::Tensor&amp; y)</span></span>
<span id="L140"><span class="lineNum"> 140</span> : {</span>
<span id="L141"><span class="lineNum"> 141</span> <span class="tlaGNC"> 56 : torch::Tensor y_pred = predict(X);</span></span>
<span id="L142"><span class="lineNum"> 142</span> <span class="tlaGNC"> 104 : return (y_pred == y).sum().item&lt;float&gt;() / y.size(0);</span></span>
<span id="L143"><span class="lineNum"> 143</span> <span class="tlaGNC"> 52 : }</span></span>
<span id="L144"><span class="lineNum"> 144</span> <span class="tlaGNC"> 8 : float Classifier::score(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X, std::vector&lt;int&gt;&amp; y)</span></span>
<span id="L145"><span class="lineNum"> 145</span> : {</span>
<span id="L146"><span class="lineNum"> 146</span> <span class="tlaGNC"> 8 : if (!fitted) {</span></span>
<span id="L147"><span class="lineNum"> 147</span> <span class="tlaGNC"> 4 : throw std::logic_error(CLASSIFIER_NOT_FITTED);</span></span>
<span id="L148"><span class="lineNum"> 148</span> : }</span>
<span id="L149"><span class="lineNum"> 149</span> <span class="tlaGNC"> 4 : return model.score(X, y);</span></span>
<span id="L150"><span class="lineNum"> 150</span> : }</span>
<span id="L151"><span class="lineNum"> 151</span> <span class="tlaGNC"> 12 : std::vector&lt;std::string&gt; Classifier::show() const</span></span>
<span id="L152"><span class="lineNum"> 152</span> : {</span>
<span id="L153"><span class="lineNum"> 153</span> <span class="tlaGNC"> 12 : return model.show();</span></span>
<span id="L154"><span class="lineNum"> 154</span> : }</span>
<span id="L155"><span class="lineNum"> 155</span> <span class="tlaGNC"> 560 : void Classifier::addNodes()</span></span>
<span id="L156"><span class="lineNum"> 156</span> : {</span>
<span id="L157"><span class="lineNum"> 157</span> : // Add all nodes to the network</span>
<span id="L158"><span class="lineNum"> 158</span> <span class="tlaGNC"> 13216 : for (const auto&amp; feature : features) {</span></span>
<span id="L159"><span class="lineNum"> 159</span> <span class="tlaGNC"> 12656 : model.addNode(feature);</span></span>
<span id="L160"><span class="lineNum"> 160</span> : }</span>
<span id="L161"><span class="lineNum"> 161</span> <span class="tlaGNC"> 560 : model.addNode(className);</span></span>
<span id="L162"><span class="lineNum"> 162</span> <span class="tlaGNC"> 560 : }</span></span>
<span id="L163"><span class="lineNum"> 163</span> <span class="tlaGNC"> 94 : int Classifier::getNumberOfNodes() const</span></span>
<span id="L164"><span class="lineNum"> 164</span> : {</span>
<span id="L165"><span class="lineNum"> 165</span> : // Features does not include class</span>
<span id="L166"><span class="lineNum"> 166</span> <span class="tlaGNC"> 94 : return fitted ? model.getFeatures().size() : 0;</span></span>
<span id="L167"><span class="lineNum"> 167</span> : }</span>
<span id="L168"><span class="lineNum"> 168</span> <span class="tlaGNC"> 94 : int Classifier::getNumberOfEdges() const</span></span>
<span id="L169"><span class="lineNum"> 169</span> : {</span>
<span id="L170"><span class="lineNum"> 170</span> <span class="tlaGNC"> 94 : return fitted ? model.getNumEdges() : 0;</span></span>
<span id="L171"><span class="lineNum"> 171</span> : }</span>
<span id="L172"><span class="lineNum"> 172</span> <span class="tlaGNC"> 12 : int Classifier::getNumberOfStates() const</span></span>
<span id="L173"><span class="lineNum"> 173</span> : {</span>
<span id="L174"><span class="lineNum"> 174</span> <span class="tlaGNC"> 12 : return fitted ? model.getStates() : 0;</span></span>
<span id="L175"><span class="lineNum"> 175</span> : }</span>
<span id="L176"><span class="lineNum"> 176</span> <span class="tlaGNC"> 170 : int Classifier::getClassNumStates() const</span></span>
<span id="L177"><span class="lineNum"> 177</span> : {</span>
<span id="L178"><span class="lineNum"> 178</span> <span class="tlaGNC"> 170 : return fitted ? model.getClassNumStates() : 0;</span></span>
<span id="L179"><span class="lineNum"> 179</span> : }</span>
<span id="L180"><span class="lineNum"> 180</span> <span class="tlaGNC"> 2 : std::vector&lt;std::string&gt; Classifier::topological_order()</span></span>
<span id="L181"><span class="lineNum"> 181</span> : {</span>
<span id="L182"><span class="lineNum"> 182</span> <span class="tlaGNC"> 2 : return model.topological_sort();</span></span>
<span id="L183"><span class="lineNum"> 183</span> : }</span>
<span id="L184"><span class="lineNum"> 184</span> <span class="tlaGNC"> 2 : std::string Classifier::dump_cpt() const</span></span>
<span id="L185"><span class="lineNum"> 185</span> : {</span>
<span id="L186"><span class="lineNum"> 186</span> <span class="tlaGNC"> 2 : return model.dump_cpt();</span></span>
<span id="L187"><span class="lineNum"> 187</span> : }</span>
<span id="L188"><span class="lineNum"> 188</span> <span class="tlaGNC"> 42 : void Classifier::setHyperparameters(const nlohmann::json&amp; hyperparameters)</span></span>
<span id="L189"><span class="lineNum"> 189</span> : {</span>
<span id="L190"><span class="lineNum"> 190</span> <span class="tlaGNC"> 42 : if (!hyperparameters.empty()) {</span></span>
<span id="L191"><span class="lineNum"> 191</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;Invalid hyperparameters&quot; + hyperparameters.dump());</span></span>
<span id="L192"><span class="lineNum"> 192</span> : }</span>
<span id="L193"><span class="lineNum"> 193</span> <span class="tlaGNC"> 38 : }</span></span>
<span id="L194"><span class="lineNum"> 194</span> : }</span>
</pre>
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<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryMed">80.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">4</td>
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<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<td class="headerCovTableEntry">4</td>
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<td class="headerCovTableEntryMed">80.0&nbsp;%</td>
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<td class="coverFn"><a href="Classifier.h.gcov.html#L31">_ZN8bayesnet10Classifier10getVersionB5cxx11Ev</a></td>
<td class="coverFnHi">16</td>
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<td class="coverFn"><a href="Classifier.h.gcov.html#L16">_ZN8bayesnet10ClassifierD0Ev</a></td>
<td class="coverFnHi">606</td>
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<td class="coverFnAlias"><a href="Classifier.h.gcov.html#L16">_ZN8bayesnet10ClassifierD0Ev</a></td>
<td class="coverFnAliasLo">0</td>
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<td class="coverFnAlias"><a href="Classifier.h.gcov.html#L16">_ZN8bayesnet10ClassifierD2Ev</a></td>
<td class="coverFnAliasHi">606</td>
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<tr>
<td class="coverFn"><a href="Classifier.h.gcov.html#L36">_ZNK8bayesnet10Classifier8getNotesB5cxx11Ev</a></td>
<td class="coverFnHi">38</td>
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<tr>
<td class="coverFn"><a href="Classifier.h.gcov.html#L30">_ZNK8bayesnet10Classifier9getStatusEv</a></td>
<td class="coverFnHi">64</td>
</tr>
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View File

@@ -1,141 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/Classifier.h</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - Classifier.h<span style="font-size: 80%;"> (source / <a href="Classifier.h.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryMed">80.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
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</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
</tr>
<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef CLASSIFIER_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define CLASSIFIER_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &lt;torch/torch.h&gt;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;bayesnet/utils/BayesMetrics.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : #include &quot;bayesnet/network/Network.h&quot;</span>
<span id="L12"><span class="lineNum"> 12</span> : #include &quot;bayesnet/BaseClassifier.h&quot;</span>
<span id="L13"><span class="lineNum"> 13</span> : </span>
<span id="L14"><span class="lineNum"> 14</span> : namespace bayesnet {</span>
<span id="L15"><span class="lineNum"> 15</span> : class Classifier : public BaseClassifier {</span>
<span id="L16"><span class="lineNum"> 16</span> : public:</span>
<span id="L17"><span class="lineNum"> 17</span> : Classifier(Network model);</span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC tlaBgGNC"> 606 : virtual ~Classifier() = default;</span></span>
<span id="L19"><span class="lineNum"> 19</span> : Classifier&amp; fit(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X, std::vector&lt;int&gt;&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L20"><span class="lineNum"> 20</span> : Classifier&amp; fit(torch::Tensor&amp; X, torch::Tensor&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L21"><span class="lineNum"> 21</span> : Classifier&amp; fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L22"><span class="lineNum"> 22</span> : Classifier&amp; fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states, const torch::Tensor&amp; weights) override;</span>
<span id="L23"><span class="lineNum"> 23</span> : void addNodes();</span>
<span id="L24"><span class="lineNum"> 24</span> : int getNumberOfNodes() const override;</span>
<span id="L25"><span class="lineNum"> 25</span> : int getNumberOfEdges() const override;</span>
<span id="L26"><span class="lineNum"> 26</span> : int getNumberOfStates() const override;</span>
<span id="L27"><span class="lineNum"> 27</span> : int getClassNumStates() const override;</span>
<span id="L28"><span class="lineNum"> 28</span> : torch::Tensor predict(torch::Tensor&amp; X) override;</span>
<span id="L29"><span class="lineNum"> 29</span> : std::vector&lt;int&gt; predict(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X) override;</span>
<span id="L30"><span class="lineNum"> 30</span> : torch::Tensor predict_proba(torch::Tensor&amp; X) override;</span>
<span id="L31"><span class="lineNum"> 31</span> : std::vector&lt;std::vector&lt;double&gt;&gt; predict_proba(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X) override;</span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 64 : status_t getStatus() const override { return status; }</span></span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 48 : std::string getVersion() override { return { project_version.begin(), project_version.end() }; };</span></span>
<span id="L34"><span class="lineNum"> 34</span> : float score(torch::Tensor&amp; X, torch::Tensor&amp; y) override;</span>
<span id="L35"><span class="lineNum"> 35</span> : float score(std::vector&lt;std::vector&lt;int&gt;&gt;&amp; X, std::vector&lt;int&gt;&amp; y) override;</span>
<span id="L36"><span class="lineNum"> 36</span> : std::vector&lt;std::string&gt; show() const override;</span>
<span id="L37"><span class="lineNum"> 37</span> : std::vector&lt;std::string&gt; topological_order() override;</span>
<span id="L38"><span class="lineNum"> 38</span> <span class="tlaGNC"> 38 : std::vector&lt;std::string&gt; getNotes() const override { return notes; }</span></span>
<span id="L39"><span class="lineNum"> 39</span> : std::string dump_cpt() const override;</span>
<span id="L40"><span class="lineNum"> 40</span> : void setHyperparameters(const nlohmann::json&amp; hyperparameters) override; //For classifiers that don't have hyperparameters</span>
<span id="L41"><span class="lineNum"> 41</span> : protected:</span>
<span id="L42"><span class="lineNum"> 42</span> : bool fitted;</span>
<span id="L43"><span class="lineNum"> 43</span> : unsigned int m, n; // m: number of samples, n: number of features</span>
<span id="L44"><span class="lineNum"> 44</span> : Network model;</span>
<span id="L45"><span class="lineNum"> 45</span> : Metrics metrics;</span>
<span id="L46"><span class="lineNum"> 46</span> : std::vector&lt;std::string&gt; features;</span>
<span id="L47"><span class="lineNum"> 47</span> : std::string className;</span>
<span id="L48"><span class="lineNum"> 48</span> : std::map&lt;std::string, std::vector&lt;int&gt;&gt; states;</span>
<span id="L49"><span class="lineNum"> 49</span> : torch::Tensor dataset; // (n+1)xm tensor</span>
<span id="L50"><span class="lineNum"> 50</span> : status_t status = NORMAL;</span>
<span id="L51"><span class="lineNum"> 51</span> : std::vector&lt;std::string&gt; notes; // Used to store messages occurred during the fit process</span>
<span id="L52"><span class="lineNum"> 52</span> : void checkFitParameters();</span>
<span id="L53"><span class="lineNum"> 53</span> : virtual void buildModel(const torch::Tensor&amp; weights) = 0;</span>
<span id="L54"><span class="lineNum"> 54</span> : void trainModel(const torch::Tensor&amp; weights) override;</span>
<span id="L55"><span class="lineNum"> 55</span> : void buildDataset(torch::Tensor&amp; y);</span>
<span id="L56"><span class="lineNum"> 56</span> : private:</span>
<span id="L57"><span class="lineNum"> 57</span> : Classifier&amp; build(const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, std::map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states, const torch::Tensor&amp; weights);</span>
<span id="L58"><span class="lineNum"> 58</span> : };</span>
<span id="L59"><span class="lineNum"> 59</span> : }</span>
<span id="L60"><span class="lineNum"> 60</span> : #endif</span>
<span id="L61"><span class="lineNum"> 61</span> : </span>
<span id="L62"><span class="lineNum"> 62</span> : </span>
<span id="L63"><span class="lineNum"> 63</span> : </span>
<span id="L64"><span class="lineNum"> 64</span> : </span>
<span id="L65"><span class="lineNum"> 65</span> : </span>
</pre>
</td>
</tr>
</table>
<br>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
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View File

@@ -1,110 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/KDB.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDB.cc<span style="font-size: 80%;"> (<a href="KDB.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">96.3&nbsp;%</td>
<td class="headerCovTableEntry">54</td>
<td class="headerCovTableEntry">52</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">5</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="KDB.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L101">_ZNK8bayesnet3KDB5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">4</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L13">_ZN8bayesnet3KDB18setHyperparametersERKN8nlohmann16json_abi_v3_11_310basic_jsonISt3mapSt6vectorNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEblmdSaNS2_14adl_serializerES5_IhSaIhEEvEE</a></td>
<td class="coverFnHi">6</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L26">_ZN8bayesnet3KDB10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">26</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L8">_ZN8bayesnet3KDBC2Eif</a></td>
<td class="coverFnHi">74</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L77">_ZN8bayesnet3KDB11add_m_edgesEiRSt6vectorIiSaIiEERN2at6TensorE</a></td>
<td class="coverFnHi">172</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
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View File

@@ -1,110 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/KDB.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDB.cc<span style="font-size: 80%;"> (<a href="KDB.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">96.3&nbsp;%</td>
<td class="headerCovTableEntry">54</td>
<td class="headerCovTableEntry">52</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">5</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="KDB.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L26">_ZN8bayesnet3KDB10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">26</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L77">_ZN8bayesnet3KDB11add_m_edgesEiRSt6vectorIiSaIiEERN2at6TensorE</a></td>
<td class="coverFnHi">172</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L13">_ZN8bayesnet3KDB18setHyperparametersERKN8nlohmann16json_abi_v3_11_310basic_jsonISt3mapSt6vectorNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEblmdSaNS2_14adl_serializerES5_IhSaIhEEvEE</a></td>
<td class="coverFnHi">6</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L8">_ZN8bayesnet3KDBC2Eif</a></td>
<td class="coverFnHi">74</td>
</tr>
<tr>
<td class="coverFn"><a href="KDB.cc.gcov.html#L101">_ZNK8bayesnet3KDB5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">4</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
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View File

@@ -1,187 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/KDB.cc</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDB.cc<span style="font-size: 80%;"> (source / <a href="KDB.cc.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">96.3&nbsp;%</td>
<td class="headerCovTableEntry">54</td>
<td class="headerCovTableEntry">52</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">5</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
</tr>
<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;KDB.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 74 : KDB::KDB(int k, float theta) : Classifier(Network()), k(k), theta(theta)</span></span>
<span id="L11"><span class="lineNum"> 11</span> : {</span>
<span id="L12"><span class="lineNum"> 12</span> <span class="tlaGNC"> 222 : validHyperparameters = { &quot;k&quot;, &quot;theta&quot; };</span></span>
<span id="L13"><span class="lineNum"> 13</span> : </span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 222 : }</span></span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 6 : void KDB::setHyperparameters(const nlohmann::json&amp; hyperparameters_)</span></span>
<span id="L16"><span class="lineNum"> 16</span> : {</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 6 : auto hyperparameters = hyperparameters_;</span></span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC"> 6 : if (hyperparameters.contains(&quot;k&quot;)) {</span></span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 2 : k = hyperparameters[&quot;k&quot;];</span></span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC"> 2 : hyperparameters.erase(&quot;k&quot;);</span></span>
<span id="L21"><span class="lineNum"> 21</span> : }</span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 6 : if (hyperparameters.contains(&quot;theta&quot;)) {</span></span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC"> 2 : theta = hyperparameters[&quot;theta&quot;];</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 2 : hyperparameters.erase(&quot;theta&quot;);</span></span>
<span id="L25"><span class="lineNum"> 25</span> : }</span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 6 : Classifier::setHyperparameters(hyperparameters);</span></span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 6 : }</span></span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 26 : void KDB::buildModel(const torch::Tensor&amp; weights)</span></span>
<span id="L29"><span class="lineNum"> 29</span> : {</span>
<span id="L30"><span class="lineNum"> 30</span> : /*</span>
<span id="L31"><span class="lineNum"> 31</span> : 1. For each feature Xi, compute mutual information, I(X;C),</span>
<span id="L32"><span class="lineNum"> 32</span> : where C is the class.</span>
<span id="L33"><span class="lineNum"> 33</span> : 2. Compute class conditional mutual information I(Xi;XjIC), f or each</span>
<span id="L34"><span class="lineNum"> 34</span> : pair of features Xi and Xj, where i#j.</span>
<span id="L35"><span class="lineNum"> 35</span> : 3. Let the used variable list, S, be empty.</span>
<span id="L36"><span class="lineNum"> 36</span> : 4. Let the DAG network being constructed, BN, begin with a single</span>
<span id="L37"><span class="lineNum"> 37</span> : class node, C.</span>
<span id="L38"><span class="lineNum"> 38</span> : 5. Repeat until S includes all domain features</span>
<span id="L39"><span class="lineNum"> 39</span> : 5.1. Select feature Xmax which is not in S and has the largest value</span>
<span id="L40"><span class="lineNum"> 40</span> : I(Xmax;C).</span>
<span id="L41"><span class="lineNum"> 41</span> : 5.2. Add a node to BN representing Xmax.</span>
<span id="L42"><span class="lineNum"> 42</span> : 5.3. Add an arc from C to Xmax in BN.</span>
<span id="L43"><span class="lineNum"> 43</span> : 5.4. Add m = min(lSl,/c) arcs from m distinct features Xj in S with</span>
<span id="L44"><span class="lineNum"> 44</span> : the highest value for I(Xmax;X,jC).</span>
<span id="L45"><span class="lineNum"> 45</span> : 5.5. Add Xmax to S.</span>
<span id="L46"><span class="lineNum"> 46</span> : Compute the conditional probabilility infered by the structure of BN by</span>
<span id="L47"><span class="lineNum"> 47</span> : using counts from DB, and output BN.</span>
<span id="L48"><span class="lineNum"> 48</span> : */</span>
<span id="L49"><span class="lineNum"> 49</span> : // 1. For each feature Xi, compute mutual information, I(X;C),</span>
<span id="L50"><span class="lineNum"> 50</span> : // where C is the class.</span>
<span id="L51"><span class="lineNum"> 51</span> <span class="tlaGNC"> 26 : addNodes();</span></span>
<span id="L52"><span class="lineNum"> 52</span> <span class="tlaGNC"> 78 : const torch::Tensor&amp; y = dataset.index({ -1, &quot;...&quot; });</span></span>
<span id="L53"><span class="lineNum"> 53</span> <span class="tlaGNC"> 26 : std::vector&lt;double&gt; mi;</span></span>
<span id="L54"><span class="lineNum"> 54</span> <span class="tlaGNC"> 198 : for (auto i = 0; i &lt; features.size(); i++) {</span></span>
<span id="L55"><span class="lineNum"> 55</span> <span class="tlaGNC"> 516 : torch::Tensor firstFeature = dataset.index({ i, &quot;...&quot; });</span></span>
<span id="L56"><span class="lineNum"> 56</span> <span class="tlaGNC"> 172 : mi.push_back(metrics.mutualInformation(firstFeature, y, weights));</span></span>
<span id="L57"><span class="lineNum"> 57</span> <span class="tlaGNC"> 172 : }</span></span>
<span id="L58"><span class="lineNum"> 58</span> : // 2. Compute class conditional mutual information I(Xi;XjIC), f or each</span>
<span id="L59"><span class="lineNum"> 59</span> <span class="tlaGNC"> 26 : auto conditionalEdgeWeights = metrics.conditionalEdge(weights);</span></span>
<span id="L60"><span class="lineNum"> 60</span> : // 3. Let the used variable list, S, be empty.</span>
<span id="L61"><span class="lineNum"> 61</span> <span class="tlaGNC"> 26 : std::vector&lt;int&gt; S;</span></span>
<span id="L62"><span class="lineNum"> 62</span> : // 4. Let the DAG network being constructed, BN, begin with a single</span>
<span id="L63"><span class="lineNum"> 63</span> : // class node, C.</span>
<span id="L64"><span class="lineNum"> 64</span> : // 5. Repeat until S includes all domain features</span>
<span id="L65"><span class="lineNum"> 65</span> : // 5.1. Select feature Xmax which is not in S and has the largest value</span>
<span id="L66"><span class="lineNum"> 66</span> : // I(Xmax;C).</span>
<span id="L67"><span class="lineNum"> 67</span> <span class="tlaGNC"> 26 : auto order = argsort(mi);</span></span>
<span id="L68"><span class="lineNum"> 68</span> <span class="tlaGNC"> 198 : for (auto idx : order) {</span></span>
<span id="L69"><span class="lineNum"> 69</span> : // 5.2. Add a node to BN representing Xmax.</span>
<span id="L70"><span class="lineNum"> 70</span> : // 5.3. Add an arc from C to Xmax in BN.</span>
<span id="L71"><span class="lineNum"> 71</span> <span class="tlaGNC"> 172 : model.addEdge(className, features[idx]);</span></span>
<span id="L72"><span class="lineNum"> 72</span> : // 5.4. Add m = min(lSl,/c) arcs from m distinct features Xj in S with</span>
<span id="L73"><span class="lineNum"> 73</span> : // the highest value for I(Xmax;X,jC).</span>
<span id="L74"><span class="lineNum"> 74</span> <span class="tlaGNC"> 172 : add_m_edges(idx, S, conditionalEdgeWeights);</span></span>
<span id="L75"><span class="lineNum"> 75</span> : // 5.5. Add Xmax to S.</span>
<span id="L76"><span class="lineNum"> 76</span> <span class="tlaGNC"> 172 : S.push_back(idx);</span></span>
<span id="L77"><span class="lineNum"> 77</span> : }</span>
<span id="L78"><span class="lineNum"> 78</span> <span class="tlaGNC"> 224 : }</span></span>
<span id="L79"><span class="lineNum"> 79</span> <span class="tlaGNC"> 172 : void KDB::add_m_edges(int idx, std::vector&lt;int&gt;&amp; S, torch::Tensor&amp; weights)</span></span>
<span id="L80"><span class="lineNum"> 80</span> : {</span>
<span id="L81"><span class="lineNum"> 81</span> <span class="tlaGNC"> 172 : auto n_edges = std::min(k, static_cast&lt;int&gt;(S.size()));</span></span>
<span id="L82"><span class="lineNum"> 82</span> <span class="tlaGNC"> 172 : auto cond_w = clone(weights);</span></span>
<span id="L83"><span class="lineNum"> 83</span> <span class="tlaGNC"> 172 : bool exit_cond = k == 0;</span></span>
<span id="L84"><span class="lineNum"> 84</span> <span class="tlaGNC"> 172 : int num = 0;</span></span>
<span id="L85"><span class="lineNum"> 85</span> <span class="tlaGNC"> 502 : while (!exit_cond) {</span></span>
<span id="L86"><span class="lineNum"> 86</span> <span class="tlaGNC"> 1320 : auto max_minfo = argmax(cond_w.index({ idx, &quot;...&quot; })).item&lt;int&gt;();</span></span>
<span id="L87"><span class="lineNum"> 87</span> <span class="tlaGNC"> 330 : auto belongs = find(S.begin(), S.end(), max_minfo) != S.end();</span></span>
<span id="L88"><span class="lineNum"> 88</span> <span class="tlaGNC"> 882 : if (belongs &amp;&amp; cond_w.index({ idx, max_minfo }).item&lt;float&gt;() &gt; theta) {</span></span>
<span id="L89"><span class="lineNum"> 89</span> : try {</span>
<span id="L90"><span class="lineNum"> 90</span> <span class="tlaGNC"> 160 : model.addEdge(features[max_minfo], features[idx]);</span></span>
<span id="L91"><span class="lineNum"> 91</span> <span class="tlaGNC"> 160 : num++;</span></span>
<span id="L92"><span class="lineNum"> 92</span> : }</span>
<span id="L93"><span class="lineNum"> 93</span> <span class="tlaUNC tlaBgUNC"> 0 : catch (const std::invalid_argument&amp; e) {</span></span>
<span id="L94"><span class="lineNum"> 94</span> : // Loops are not allowed</span>
<span id="L95"><span class="lineNum"> 95</span> <span class="tlaUNC"> 0 : }</span></span>
<span id="L96"><span class="lineNum"> 96</span> : }</span>
<span id="L97"><span class="lineNum"> 97</span> <span class="tlaGNC tlaBgGNC"> 1320 : cond_w.index_put_({ idx, max_minfo }, -1);</span></span>
<span id="L98"><span class="lineNum"> 98</span> <span class="tlaGNC"> 990 : auto candidates_mask = cond_w.index({ idx, &quot;...&quot; }).gt(theta);</span></span>
<span id="L99"><span class="lineNum"> 99</span> <span class="tlaGNC"> 330 : auto candidates = candidates_mask.nonzero();</span></span>
<span id="L100"><span class="lineNum"> 100</span> <span class="tlaGNC"> 330 : exit_cond = num == n_edges || candidates.size(0) == 0;</span></span>
<span id="L101"><span class="lineNum"> 101</span> <span class="tlaGNC"> 330 : }</span></span>
<span id="L102"><span class="lineNum"> 102</span> <span class="tlaGNC"> 1346 : }</span></span>
<span id="L103"><span class="lineNum"> 103</span> <span class="tlaGNC"> 4 : std::vector&lt;std::string&gt; KDB::graph(const std::string&amp; title) const</span></span>
<span id="L104"><span class="lineNum"> 104</span> : {</span>
<span id="L105"><span class="lineNum"> 105</span> <span class="tlaGNC"> 4 : std::string header{ title };</span></span>
<span id="L106"><span class="lineNum"> 106</span> <span class="tlaGNC"> 4 : if (title == &quot;KDB&quot;) {</span></span>
<span id="L107"><span class="lineNum"> 107</span> <span class="tlaGNC"> 4 : header += &quot; (k=&quot; + std::to_string(k) + &quot;, theta=&quot; + std::to_string(theta) + &quot;)&quot;;</span></span>
<span id="L108"><span class="lineNum"> 108</span> : }</span>
<span id="L109"><span class="lineNum"> 109</span> <span class="tlaGNC"> 8 : return model.graph(header);</span></span>
<span id="L110"><span class="lineNum"> 110</span> <span class="tlaGNC"> 4 : }</span></span>
<span id="L111"><span class="lineNum"> 111</span> : }</span>
</pre>
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<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
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<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
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<td class="coverFn"><a href="KDB.h.gcov.html#L20">_ZN8bayesnet3KDBD0Ev</a></td>
<td class="coverFnHi">22</td>
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<td class="coverFnAlias"><a href="KDB.h.gcov.html#L20">_ZN8bayesnet3KDBD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
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<td class="coverFnAlias"><a href="KDB.h.gcov.html#L20">_ZN8bayesnet3KDBD2Ev</a></td>
<td class="coverFnAliasHi">18</td>
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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<td class="coverFnHi">22</td>
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<td class="coverFnAlias"><a href="KDB.h.gcov.html#L20">_ZN8bayesnet3KDBD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
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<td class="coverFnAlias"><a href="KDB.h.gcov.html#L20">_ZN8bayesnet3KDBD2Ev</a></td>
<td class="coverFnAliasHi">18</td>
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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef KDB_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define KDB_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &lt;torch/torch.h&gt;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;bayesnet/utils/bayesnetUtils.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : #include &quot;Classifier.h&quot;</span>
<span id="L12"><span class="lineNum"> 12</span> : namespace bayesnet {</span>
<span id="L13"><span class="lineNum"> 13</span> : class KDB : public Classifier {</span>
<span id="L14"><span class="lineNum"> 14</span> : private:</span>
<span id="L15"><span class="lineNum"> 15</span> : int k;</span>
<span id="L16"><span class="lineNum"> 16</span> : float theta;</span>
<span id="L17"><span class="lineNum"> 17</span> : void add_m_edges(int idx, std::vector&lt;int&gt;&amp; S, torch::Tensor&amp; weights);</span>
<span id="L18"><span class="lineNum"> 18</span> : protected:</span>
<span id="L19"><span class="lineNum"> 19</span> : void buildModel(const torch::Tensor&amp; weights) override;</span>
<span id="L20"><span class="lineNum"> 20</span> : public:</span>
<span id="L21"><span class="lineNum"> 21</span> : explicit KDB(int k, float theta = 0.03);</span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC tlaBgGNC"> 22 : virtual ~KDB() = default;</span></span>
<span id="L23"><span class="lineNum"> 23</span> : void setHyperparameters(const nlohmann::json&amp; hyperparameters_) override;</span>
<span id="L24"><span class="lineNum"> 24</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;KDB&quot;) const override;</span>
<span id="L25"><span class="lineNum"> 25</span> : };</span>
<span id="L26"><span class="lineNum"> 26</span> : }</span>
<span id="L27"><span class="lineNum"> 27</span> : #endif</span>
</pre>
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDBLd.cc<span style="font-size: 80%;"> (<a href="KDBLd.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">17</td>
<td class="headerCovTableEntry">17</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
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</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
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<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="KDBLd.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L29">_ZNK8bayesnet5KDBLd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L24">_ZN8bayesnet5KDBLd7predictERN2at6TensorE</a></td>
<td class="coverFnHi">8</td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L9">_ZN8bayesnet5KDBLd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L8">_ZN8bayesnet5KDBLdC2Ei</a></td>
<td class="coverFnHi">34</td>
</tr>
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@@ -1,103 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/KDBLd.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
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<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDBLd.cc<span style="font-size: 80%;"> (<a href="KDBLd.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">17</td>
<td class="headerCovTableEntry">17</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="KDBLd.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L9">_ZN8bayesnet5KDBLd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L24">_ZN8bayesnet5KDBLd7predictERN2at6TensorE</a></td>
<td class="coverFnHi">8</td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L8">_ZN8bayesnet5KDBLdC2Ei</a></td>
<td class="coverFnHi">34</td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.cc.gcov.html#L29">_ZNK8bayesnet5KDBLd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
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View File

@@ -1,111 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/KDBLd.cc</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">17</td>
<td class="headerCovTableEntry">17</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;KDBLd.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 34 : KDBLd::KDBLd(int k) : KDB(k), Proposal(dataset, features, className) {}</span></span>
<span id="L11"><span class="lineNum"> 11</span> <span class="tlaGNC"> 10 : KDBLd&amp; KDBLd::fit(torch::Tensor&amp; X_, torch::Tensor&amp; y_, const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_)</span></span>
<span id="L12"><span class="lineNum"> 12</span> : {</span>
<span id="L13"><span class="lineNum"> 13</span> <span class="tlaGNC"> 10 : checkInput(X_, y_);</span></span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 10 : features = features_;</span></span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 10 : className = className_;</span></span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC"> 10 : Xf = X_;</span></span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 10 : y = y_;</span></span>
<span id="L18"><span class="lineNum"> 18</span> : // Fills std::vectors Xv &amp; yv with the data from tensors X_ (discretized) &amp; y</span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 10 : states = fit_local_discretization(y);</span></span>
<span id="L20"><span class="lineNum"> 20</span> : // We have discretized the input data</span>
<span id="L21"><span class="lineNum"> 21</span> : // 1st we need to fit the model to build the normal KDB structure, KDB::fit initializes the base Bayesian network</span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 10 : KDB::fit(dataset, features, className, states);</span></span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC"> 10 : states = localDiscretizationProposal(states, model);</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 10 : return *this;</span></span>
<span id="L25"><span class="lineNum"> 25</span> : }</span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 8 : torch::Tensor KDBLd::predict(torch::Tensor&amp; X)</span></span>
<span id="L27"><span class="lineNum"> 27</span> : {</span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 8 : auto Xt = prepareX(X);</span></span>
<span id="L29"><span class="lineNum"> 29</span> <span class="tlaGNC"> 16 : return KDB::predict(Xt);</span></span>
<span id="L30"><span class="lineNum"> 30</span> <span class="tlaGNC"> 8 : }</span></span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 2 : std::vector&lt;std::string&gt; KDBLd::graph(const std::string&amp; name) const</span></span>
<span id="L32"><span class="lineNum"> 32</span> : {</span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 2 : return KDB::graph(name);</span></span>
<span id="L34"><span class="lineNum"> 34</span> : }</span>
<span id="L35"><span class="lineNum"> 35</span> : }</span>
</pre>
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View File

@@ -1,96 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
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<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDBLd.h<span style="font-size: 80%;"> (<a href="KDBLd.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
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<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="KDBLd.h.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.h.gcov.html#L15">_ZN8bayesnet5KDBLdD0Ev</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="KDBLd.h.gcov.html#L15">_ZN8bayesnet5KDBLdD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="KDBLd.h.gcov.html#L15">_ZN8bayesnet5KDBLdD2Ev</a></td>
<td class="coverFnAliasHi">6</td>
</tr>
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDBLd.h<span style="font-size: 80%;"> (<a href="KDBLd.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="KDBLd.h.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="KDBLd.h.gcov.html#L15">_ZN8bayesnet5KDBLdD0Ev</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="KDBLd.h.gcov.html#L15">_ZN8bayesnet5KDBLdD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="KDBLd.h.gcov.html#L15">_ZN8bayesnet5KDBLdD2Ev</a></td>
<td class="coverFnAliasHi">6</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
</html>

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@@ -1,100 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/KDBLd.h</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - KDBLd.h<span style="font-size: 80%;"> (source / <a href="KDBLd.h.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
</tr>
<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef KDBLD_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define KDBLD_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;Proposal.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;KDB.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : </span>
<span id="L12"><span class="lineNum"> 12</span> : namespace bayesnet {</span>
<span id="L13"><span class="lineNum"> 13</span> : class KDBLd : public KDB, public Proposal {</span>
<span id="L14"><span class="lineNum"> 14</span> : private:</span>
<span id="L15"><span class="lineNum"> 15</span> : public:</span>
<span id="L16"><span class="lineNum"> 16</span> : explicit KDBLd(int k);</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC tlaBgGNC"> 10 : virtual ~KDBLd() = default;</span></span>
<span id="L18"><span class="lineNum"> 18</span> : KDBLd&amp; fit(torch::Tensor&amp; X, torch::Tensor&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L19"><span class="lineNum"> 19</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;KDB&quot;) const override;</span>
<span id="L20"><span class="lineNum"> 20</span> : torch::Tensor predict(torch::Tensor&amp; X) override;</span>
<span id="L21"><span class="lineNum"> 21</span> : static inline std::string version() { return &quot;0.0.1&quot;; };</span>
<span id="L22"><span class="lineNum"> 22</span> : };</span>
<span id="L23"><span class="lineNum"> 23</span> : }</span>
<span id="L24"><span class="lineNum"> 24</span> : #endif // !KDBLD_H</span>
</pre>
</td>
</tr>
</table>
<br>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
</html>

View File

@@ -1,145 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/Proposal.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - Proposal.cc<span style="font-size: 80%;"> (<a href="Proposal.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">97.7&nbsp;%</td>
<td class="headerCovTableEntry">86</td>
<td class="headerCovTableEntry">84</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryMed">88.9&nbsp;%</td>
<td class="headerCovTableEntry">9</td>
<td class="headerCovTableEntry">8</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="Proposal.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L104">_ZN8bayesnet8Proposal8prepareXERN2at6TensorE</a></td>
<td class="coverFnHi">84</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L10">_ZN8bayesnet8ProposalD0Ev</a></td>
<td class="coverFnHi">100</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="Proposal.cc.gcov.html#L10">_ZN8bayesnet8ProposalD0Ev</a></td>
<td class="coverFnAliasLo">0</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="Proposal.cc.gcov.html#L10">_ZN8bayesnet8ProposalD2Ev</a></td>
<td class="coverFnAliasHi">100</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L25">_ZN8bayesnet8Proposal27localDiscretizationProposalERKSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS7_ESaISt4pairIKS7_SA_EEERNS_7NetworkE</a></td>
<td class="coverFnHi">106</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L16">_ZN8bayesnet8Proposal10checkInputERKN2at6TensorES4_</a></td>
<td class="coverFnHi">114</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L77">_ZN8bayesnet8Proposal24fit_local_discretizationB5cxx11ERKN2at6TensorE</a></td>
<td class="coverFnHi">116</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L9">_ZN8bayesnet8ProposalC2ERN2at6TensorERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERSA_</a></td>
<td class="coverFnHi">212</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L47">_ZZN8bayesnet8Proposal27localDiscretizationProposalERKSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS7_ESaISt4pairIKS7_SA_EEERNS_7NetworkEENKUlRKT_E0_clIS7_EEDaSO_</a></td>
<td class="coverFnHi">686</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L41">_ZZN8bayesnet8Proposal27localDiscretizationProposalERKSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS7_ESaISt4pairIKS7_SA_EEERNS_7NetworkEENKUlRKT_E_clIPNS_4NodeEEEDaSO_</a></td>
<td class="coverFnHi">1348</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
</html>

View File

@@ -1,145 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/Proposal.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - Proposal.cc<span style="font-size: 80%;"> (<a href="Proposal.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">97.7&nbsp;%</td>
<td class="headerCovTableEntry">86</td>
<td class="headerCovTableEntry">84</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryMed">88.9&nbsp;%</td>
<td class="headerCovTableEntry">9</td>
<td class="headerCovTableEntry">8</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="Proposal.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L16">_ZN8bayesnet8Proposal10checkInputERKN2at6TensorES4_</a></td>
<td class="coverFnHi">114</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L77">_ZN8bayesnet8Proposal24fit_local_discretizationB5cxx11ERKN2at6TensorE</a></td>
<td class="coverFnHi">116</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L25">_ZN8bayesnet8Proposal27localDiscretizationProposalERKSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS7_ESaISt4pairIKS7_SA_EEERNS_7NetworkE</a></td>
<td class="coverFnHi">106</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L104">_ZN8bayesnet8Proposal8prepareXERN2at6TensorE</a></td>
<td class="coverFnHi">84</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L9">_ZN8bayesnet8ProposalC2ERN2at6TensorERSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERSA_</a></td>
<td class="coverFnHi">212</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L10">_ZN8bayesnet8ProposalD0Ev</a></td>
<td class="coverFnHi">100</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="Proposal.cc.gcov.html#L10">_ZN8bayesnet8ProposalD0Ev</a></td>
<td class="coverFnAliasLo">0</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="Proposal.cc.gcov.html#L10">_ZN8bayesnet8ProposalD2Ev</a></td>
<td class="coverFnAliasHi">100</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L47">_ZZN8bayesnet8Proposal27localDiscretizationProposalERKSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS7_ESaISt4pairIKS7_SA_EEERNS_7NetworkEENKUlRKT_E0_clIS7_EEDaSO_</a></td>
<td class="coverFnHi">686</td>
</tr>
<tr>
<td class="coverFn"><a href="Proposal.cc.gcov.html#L41">_ZZN8bayesnet8Proposal27localDiscretizationProposalERKSt3mapINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESt6vectorIiSaIiEESt4lessIS7_ESaISt4pairIKS7_SA_EEERNS_7NetworkEENKUlRKT_E_clIPNS_4NodeEEEDaSO_</a></td>
<td class="coverFnHi">1348</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
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View File

@@ -1,192 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/Proposal.cc</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - Proposal.cc<span style="font-size: 80%;"> (source / <a href="Proposal.cc.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">97.7&nbsp;%</td>
<td class="headerCovTableEntry">86</td>
<td class="headerCovTableEntry">84</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryMed">88.9&nbsp;%</td>
<td class="headerCovTableEntry">9</td>
<td class="headerCovTableEntry">8</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
</tr>
<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &lt;ArffFiles.h&gt;</span>
<span id="L8"><span class="lineNum"> 8</span> : #include &quot;Proposal.h&quot;</span>
<span id="L9"><span class="lineNum"> 9</span> : </span>
<span id="L10"><span class="lineNum"> 10</span> : namespace bayesnet {</span>
<span id="L11"><span class="lineNum"> 11</span> <span class="tlaGNC tlaBgGNC"> 212 : Proposal::Proposal(torch::Tensor&amp; dataset_, std::vector&lt;std::string&gt;&amp; features_, std::string&amp; className_) : pDataset(dataset_), pFeatures(features_), pClassName(className_) {}</span></span>
<span id="L12"><span class="lineNum"> 12</span> <span class="tlaGNC"> 100 : Proposal::~Proposal()</span></span>
<span id="L13"><span class="lineNum"> 13</span> : {</span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 948 : for (auto&amp; [key, value] : discretizers) {</span></span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 848 : delete value;</span></span>
<span id="L16"><span class="lineNum"> 16</span> : }</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 100 : }</span></span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC"> 114 : void Proposal::checkInput(const torch::Tensor&amp; X, const torch::Tensor&amp; y)</span></span>
<span id="L19"><span class="lineNum"> 19</span> : {</span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC"> 114 : if (!torch::is_floating_point(X)) {</span></span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaUNC tlaBgUNC"> 0 : throw std::invalid_argument(&quot;X must be a floating point tensor&quot;);</span></span>
<span id="L22"><span class="lineNum"> 22</span> : }</span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC tlaBgGNC"> 114 : if (torch::is_floating_point(y)) {</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaUNC tlaBgUNC"> 0 : throw std::invalid_argument(&quot;y must be an integer tensor&quot;);</span></span>
<span id="L25"><span class="lineNum"> 25</span> : }</span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC tlaBgGNC"> 114 : }</span></span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 106 : map&lt;std::string, std::vector&lt;int&gt;&gt; Proposal::localDiscretizationProposal(const map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; oldStates, Network&amp; model)</span></span>
<span id="L28"><span class="lineNum"> 28</span> : {</span>
<span id="L29"><span class="lineNum"> 29</span> : // order of local discretization is important. no good 0, 1, 2...</span>
<span id="L30"><span class="lineNum"> 30</span> : // although we rediscretize features after the local discretization of every feature</span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 106 : auto order = model.topological_sort();</span></span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 106 : auto&amp; nodes = model.getNodes();</span></span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 106 : map&lt;std::string, std::vector&lt;int&gt;&gt; states = oldStates;</span></span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 106 : std::vector&lt;int&gt; indicesToReDiscretize;</span></span>
<span id="L35"><span class="lineNum"> 35</span> <span class="tlaGNC"> 106 : bool upgrade = false; // Flag to check if we need to upgrade the model</span></span>
<span id="L36"><span class="lineNum"> 36</span> <span class="tlaGNC"> 888 : for (auto feature : order) {</span></span>
<span id="L37"><span class="lineNum"> 37</span> <span class="tlaGNC"> 782 : auto nodeParents = nodes[feature]-&gt;getParents();</span></span>
<span id="L38"><span class="lineNum"> 38</span> <span class="tlaGNC"> 782 : if (nodeParents.size() &lt; 2) continue; // Only has class as parent</span></span>
<span id="L39"><span class="lineNum"> 39</span> <span class="tlaGNC"> 662 : upgrade = true;</span></span>
<span id="L40"><span class="lineNum"> 40</span> <span class="tlaGNC"> 662 : int index = find(pFeatures.begin(), pFeatures.end(), feature) - pFeatures.begin();</span></span>
<span id="L41"><span class="lineNum"> 41</span> <span class="tlaGNC"> 662 : indicesToReDiscretize.push_back(index); // We need to re-discretize this feature</span></span>
<span id="L42"><span class="lineNum"> 42</span> <span class="tlaGNC"> 662 : std::vector&lt;std::string&gt; parents;</span></span>
<span id="L43"><span class="lineNum"> 43</span> <span class="tlaGNC"> 2010 : transform(nodeParents.begin(), nodeParents.end(), back_inserter(parents), [](const auto&amp; p) { return p-&gt;getName(); });</span></span>
<span id="L44"><span class="lineNum"> 44</span> : // Remove class as parent as it will be added later</span>
<span id="L45"><span class="lineNum"> 45</span> <span class="tlaGNC"> 662 : parents.erase(remove(parents.begin(), parents.end(), pClassName), parents.end());</span></span>
<span id="L46"><span class="lineNum"> 46</span> : // Get the indices of the parents</span>
<span id="L47"><span class="lineNum"> 47</span> <span class="tlaGNC"> 662 : std::vector&lt;int&gt; indices;</span></span>
<span id="L48"><span class="lineNum"> 48</span> <span class="tlaGNC"> 662 : indices.push_back(-1); // Add class index</span></span>
<span id="L49"><span class="lineNum"> 49</span> <span class="tlaGNC"> 1348 : transform(parents.begin(), parents.end(), back_inserter(indices), [&amp;](const auto&amp; p) {return find(pFeatures.begin(), pFeatures.end(), p) - pFeatures.begin(); });</span></span>
<span id="L50"><span class="lineNum"> 50</span> : // Now we fit the discretizer of the feature, conditioned on its parents and the class i.e. discretizer.fit(X[index], X[indices] + y)</span>
<span id="L51"><span class="lineNum"> 51</span> <span class="tlaGNC"> 662 : std::vector&lt;std::string&gt; yJoinParents(Xf.size(1));</span></span>
<span id="L52"><span class="lineNum"> 52</span> <span class="tlaGNC"> 2010 : for (auto idx : indices) {</span></span>
<span id="L53"><span class="lineNum"> 53</span> <span class="tlaGNC"> 479320 : for (int i = 0; i &lt; Xf.size(1); ++i) {</span></span>
<span id="L54"><span class="lineNum"> 54</span> <span class="tlaGNC"> 1433916 : yJoinParents[i] += to_string(pDataset.index({ idx, i }).item&lt;int&gt;());</span></span>
<span id="L55"><span class="lineNum"> 55</span> : }</span>
<span id="L56"><span class="lineNum"> 56</span> : }</span>
<span id="L57"><span class="lineNum"> 57</span> <span class="tlaGNC"> 662 : auto arff = ArffFiles();</span></span>
<span id="L58"><span class="lineNum"> 58</span> <span class="tlaGNC"> 662 : auto yxv = arff.factorize(yJoinParents);</span></span>
<span id="L59"><span class="lineNum"> 59</span> <span class="tlaGNC"> 1324 : auto xvf_ptr = Xf.index({ index }).data_ptr&lt;float&gt;();</span></span>
<span id="L60"><span class="lineNum"> 60</span> <span class="tlaGNC"> 662 : auto xvf = std::vector&lt;mdlp::precision_t&gt;(xvf_ptr, xvf_ptr + Xf.size(1));</span></span>
<span id="L61"><span class="lineNum"> 61</span> <span class="tlaGNC"> 662 : discretizers[feature]-&gt;fit(xvf, yxv);</span></span>
<span id="L62"><span class="lineNum"> 62</span> <span class="tlaGNC"> 902 : }</span></span>
<span id="L63"><span class="lineNum"> 63</span> <span class="tlaGNC"> 106 : if (upgrade) {</span></span>
<span id="L64"><span class="lineNum"> 64</span> : // Discretize again X (only the affected indices) with the new fitted discretizers</span>
<span id="L65"><span class="lineNum"> 65</span> <span class="tlaGNC"> 768 : for (auto index : indicesToReDiscretize) {</span></span>
<span id="L66"><span class="lineNum"> 66</span> <span class="tlaGNC"> 1324 : auto Xt_ptr = Xf.index({ index }).data_ptr&lt;float&gt;();</span></span>
<span id="L67"><span class="lineNum"> 67</span> <span class="tlaGNC"> 662 : auto Xt = std::vector&lt;float&gt;(Xt_ptr, Xt_ptr + Xf.size(1));</span></span>
<span id="L68"><span class="lineNum"> 68</span> <span class="tlaGNC"> 2648 : pDataset.index_put_({ index, &quot;...&quot; }, torch::tensor(discretizers[pFeatures[index]]-&gt;transform(Xt)));</span></span>
<span id="L69"><span class="lineNum"> 69</span> <span class="tlaGNC"> 662 : auto xStates = std::vector&lt;int&gt;(discretizers[pFeatures[index]]-&gt;getCutPoints().size() + 1);</span></span>
<span id="L70"><span class="lineNum"> 70</span> <span class="tlaGNC"> 662 : iota(xStates.begin(), xStates.end(), 0);</span></span>
<span id="L71"><span class="lineNum"> 71</span> : //Update new states of the feature/node</span>
<span id="L72"><span class="lineNum"> 72</span> <span class="tlaGNC"> 662 : states[pFeatures[index]] = xStates;</span></span>
<span id="L73"><span class="lineNum"> 73</span> <span class="tlaGNC"> 662 : }</span></span>
<span id="L74"><span class="lineNum"> 74</span> <span class="tlaGNC"> 106 : const torch::Tensor weights = torch::full({ pDataset.size(1) }, 1.0 / pDataset.size(1), torch::kDouble);</span></span>
<span id="L75"><span class="lineNum"> 75</span> <span class="tlaGNC"> 106 : model.fit(pDataset, weights, pFeatures, pClassName, states);</span></span>
<span id="L76"><span class="lineNum"> 76</span> <span class="tlaGNC"> 106 : }</span></span>
<span id="L77"><span class="lineNum"> 77</span> <span class="tlaGNC"> 212 : return states;</span></span>
<span id="L78"><span class="lineNum"> 78</span> <span class="tlaGNC"> 480064 : }</span></span>
<span id="L79"><span class="lineNum"> 79</span> <span class="tlaGNC"> 116 : map&lt;std::string, std::vector&lt;int&gt;&gt; Proposal::fit_local_discretization(const torch::Tensor&amp; y)</span></span>
<span id="L80"><span class="lineNum"> 80</span> : {</span>
<span id="L81"><span class="lineNum"> 81</span> : // Discretize the continuous input data and build pDataset (Classifier::dataset)</span>
<span id="L82"><span class="lineNum"> 82</span> <span class="tlaGNC"> 116 : int m = Xf.size(1);</span></span>
<span id="L83"><span class="lineNum"> 83</span> <span class="tlaGNC"> 116 : int n = Xf.size(0);</span></span>
<span id="L84"><span class="lineNum"> 84</span> <span class="tlaGNC"> 116 : map&lt;std::string, std::vector&lt;int&gt;&gt; states;</span></span>
<span id="L85"><span class="lineNum"> 85</span> <span class="tlaGNC"> 116 : pDataset = torch::zeros({ n + 1, m }, torch::kInt32);</span></span>
<span id="L86"><span class="lineNum"> 86</span> <span class="tlaGNC"> 116 : auto yv = std::vector&lt;int&gt;(y.data_ptr&lt;int&gt;(), y.data_ptr&lt;int&gt;() + y.size(0));</span></span>
<span id="L87"><span class="lineNum"> 87</span> : // discretize input data by feature(row)</span>
<span id="L88"><span class="lineNum"> 88</span> <span class="tlaGNC"> 972 : for (auto i = 0; i &lt; pFeatures.size(); ++i) {</span></span>
<span id="L89"><span class="lineNum"> 89</span> <span class="tlaGNC"> 856 : auto* discretizer = new mdlp::CPPFImdlp();</span></span>
<span id="L90"><span class="lineNum"> 90</span> <span class="tlaGNC"> 1712 : auto Xt_ptr = Xf.index({ i }).data_ptr&lt;float&gt;();</span></span>
<span id="L91"><span class="lineNum"> 91</span> <span class="tlaGNC"> 856 : auto Xt = std::vector&lt;float&gt;(Xt_ptr, Xt_ptr + Xf.size(1));</span></span>
<span id="L92"><span class="lineNum"> 92</span> <span class="tlaGNC"> 856 : discretizer-&gt;fit(Xt, yv);</span></span>
<span id="L93"><span class="lineNum"> 93</span> <span class="tlaGNC"> 3424 : pDataset.index_put_({ i, &quot;...&quot; }, torch::tensor(discretizer-&gt;transform(Xt)));</span></span>
<span id="L94"><span class="lineNum"> 94</span> <span class="tlaGNC"> 856 : auto xStates = std::vector&lt;int&gt;(discretizer-&gt;getCutPoints().size() + 1);</span></span>
<span id="L95"><span class="lineNum"> 95</span> <span class="tlaGNC"> 856 : iota(xStates.begin(), xStates.end(), 0);</span></span>
<span id="L96"><span class="lineNum"> 96</span> <span class="tlaGNC"> 856 : states[pFeatures[i]] = xStates;</span></span>
<span id="L97"><span class="lineNum"> 97</span> <span class="tlaGNC"> 856 : discretizers[pFeatures[i]] = discretizer;</span></span>
<span id="L98"><span class="lineNum"> 98</span> <span class="tlaGNC"> 856 : }</span></span>
<span id="L99"><span class="lineNum"> 99</span> <span class="tlaGNC"> 116 : int n_classes = torch::max(y).item&lt;int&gt;() + 1;</span></span>
<span id="L100"><span class="lineNum"> 100</span> <span class="tlaGNC"> 116 : auto yStates = std::vector&lt;int&gt;(n_classes);</span></span>
<span id="L101"><span class="lineNum"> 101</span> <span class="tlaGNC"> 116 : iota(yStates.begin(), yStates.end(), 0);</span></span>
<span id="L102"><span class="lineNum"> 102</span> <span class="tlaGNC"> 116 : states[pClassName] = yStates;</span></span>
<span id="L103"><span class="lineNum"> 103</span> <span class="tlaGNC"> 348 : pDataset.index_put_({ n, &quot;...&quot; }, y);</span></span>
<span id="L104"><span class="lineNum"> 104</span> <span class="tlaGNC"> 232 : return states;</span></span>
<span id="L105"><span class="lineNum"> 105</span> <span class="tlaGNC"> 1944 : }</span></span>
<span id="L106"><span class="lineNum"> 106</span> <span class="tlaGNC"> 84 : torch::Tensor Proposal::prepareX(torch::Tensor&amp; X)</span></span>
<span id="L107"><span class="lineNum"> 107</span> : {</span>
<span id="L108"><span class="lineNum"> 108</span> <span class="tlaGNC"> 84 : auto Xtd = torch::zeros_like(X, torch::kInt32);</span></span>
<span id="L109"><span class="lineNum"> 109</span> <span class="tlaGNC"> 688 : for (int i = 0; i &lt; X.size(0); ++i) {</span></span>
<span id="L110"><span class="lineNum"> 110</span> <span class="tlaGNC"> 604 : auto Xt = std::vector&lt;float&gt;(X[i].data_ptr&lt;float&gt;(), X[i].data_ptr&lt;float&gt;() + X.size(1));</span></span>
<span id="L111"><span class="lineNum"> 111</span> <span class="tlaGNC"> 604 : auto Xd = discretizers[pFeatures[i]]-&gt;transform(Xt);</span></span>
<span id="L112"><span class="lineNum"> 112</span> <span class="tlaGNC"> 1812 : Xtd.index_put_({ i }, torch::tensor(Xd, torch::kInt32));</span></span>
<span id="L113"><span class="lineNum"> 113</span> <span class="tlaGNC"> 604 : }</span></span>
<span id="L114"><span class="lineNum"> 114</span> <span class="tlaGNC"> 84 : return Xtd;</span></span>
<span id="L115"><span class="lineNum"> 115</span> <span class="tlaGNC"> 604 : }</span></span>
<span id="L116"><span class="lineNum"> 116</span> : }</span>
</pre>
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<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
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<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">10</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">3</td>
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<td class="coverFn"><a href="SPODE.cc.gcov.html#L24">_ZNK8bayesnet5SPODE5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
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<td class="coverFn"><a href="SPODE.cc.gcov.html#L11">_ZN8bayesnet5SPODE10buildModelERKN2at6TensorE</a></td>
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<td class="coverFn"><a href="SPODE.cc.gcov.html#L9">_ZN8bayesnet5SPODEC2Ei</a></td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">3</td>
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<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td width="100%">
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODE.cc<span style="font-size: 80%;"> (source / <a href="SPODE.cc.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">10</td>
<td class="headerCovTableEntry">10</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">3</td>
<td class="headerCovTableEntry">3</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
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<tr>
<td><br></td>
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<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;SPODE.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> : </span>
<span id="L11"><span class="lineNum"> 11</span> <span class="tlaGNC tlaBgGNC"> 562 : SPODE::SPODE(int root) : Classifier(Network()), root(root) {}</span></span>
<span id="L12"><span class="lineNum"> 12</span> : </span>
<span id="L13"><span class="lineNum"> 13</span> <span class="tlaGNC"> 508 : void SPODE::buildModel(const torch::Tensor&amp; weights)</span></span>
<span id="L14"><span class="lineNum"> 14</span> : {</span>
<span id="L15"><span class="lineNum"> 15</span> : // 0. Add all nodes to the model</span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC"> 508 : addNodes();</span></span>
<span id="L17"><span class="lineNum"> 17</span> : // 1. Add edges from the class node to all other nodes</span>
<span id="L18"><span class="lineNum"> 18</span> : // 2. Add edges from the root node to all other nodes</span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 12840 : for (int i = 0; i &lt; static_cast&lt;int&gt;(features.size()); ++i) {</span></span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC"> 12332 : model.addEdge(className, features[i]);</span></span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaGNC"> 12332 : if (i != root) {</span></span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 11824 : model.addEdge(features[root], features[i]);</span></span>
<span id="L23"><span class="lineNum"> 23</span> : }</span>
<span id="L24"><span class="lineNum"> 24</span> : }</span>
<span id="L25"><span class="lineNum"> 25</span> <span class="tlaGNC"> 508 : }</span></span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 34 : std::vector&lt;std::string&gt; SPODE::graph(const std::string&amp; name) const</span></span>
<span id="L27"><span class="lineNum"> 27</span> : {</span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 34 : return model.graph(name);</span></span>
<span id="L29"><span class="lineNum"> 29</span> : }</span>
<span id="L30"><span class="lineNum"> 30</span> : </span>
<span id="L31"><span class="lineNum"> 31</span> : }</span>
</pre>
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/SPODE.h - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
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<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODE.h<span style="font-size: 80%;"> (<a href="SPODE.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="SPODE.h.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="SPODE.h.gcov.html#L17">_ZN8bayesnet5SPODED0Ev</a></td>
<td class="coverFnHi">918</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODE.h.gcov.html#L17">_ZN8bayesnet5SPODED0Ev</a></td>
<td class="coverFnAliasHi">418</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODE.h.gcov.html#L17">_ZN8bayesnet5SPODED2Ev</a></td>
<td class="coverFnAliasHi">500</td>
</tr>
</table>
<br>
</center>
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@@ -1,96 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/SPODE.h - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
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<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODE.h<span style="font-size: 80%;"> (<a href="SPODE.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="SPODE.h.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="SPODE.h.gcov.html#L17">_ZN8bayesnet5SPODED0Ev</a></td>
<td class="coverFnHi">918</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODE.h.gcov.html#L17">_ZN8bayesnet5SPODED0Ev</a></td>
<td class="coverFnAliasHi">418</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODE.h.gcov.html#L17">_ZN8bayesnet5SPODED2Ev</a></td>
<td class="coverFnAliasHi">500</td>
</tr>
</table>
<br>
</center>
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers/SPODE.h</title>
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<table width="100%" border=0 cellspacing=0 cellpadding=0>
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<td width="100%">
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODE.h<span style="font-size: 80%;"> (source / <a href="SPODE.h.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
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</tr>
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<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef SPODE_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define SPODE_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;Classifier.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : </span>
<span id="L11"><span class="lineNum"> 11</span> : namespace bayesnet {</span>
<span id="L12"><span class="lineNum"> 12</span> : class SPODE : public Classifier {</span>
<span id="L13"><span class="lineNum"> 13</span> : private:</span>
<span id="L14"><span class="lineNum"> 14</span> : int root;</span>
<span id="L15"><span class="lineNum"> 15</span> : protected:</span>
<span id="L16"><span class="lineNum"> 16</span> : void buildModel(const torch::Tensor&amp; weights) override;</span>
<span id="L17"><span class="lineNum"> 17</span> : public:</span>
<span id="L18"><span class="lineNum"> 18</span> : explicit SPODE(int root);</span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC tlaBgGNC"> 918 : virtual ~SPODE() = default;</span></span>
<span id="L20"><span class="lineNum"> 20</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;SPODE&quot;) const override;</span>
<span id="L21"><span class="lineNum"> 21</span> : };</span>
<span id="L22"><span class="lineNum"> 22</span> : }</span>
<span id="L23"><span class="lineNum"> 23</span> : #endif</span>
</pre>
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<link rel="stylesheet" type="text/css" href="../../../gcov.css">
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<table width="100%" border=0 cellspacing=0 cellpadding=0>
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<td width="100%">
<table cellpadding=1 border=0 width="100%">
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODELd.cc<span style="font-size: 80%;"> (<a href="SPODELd.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">26</td>
<td class="headerCovTableEntry">26</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">6</td>
<td class="headerCovTableEntry">6</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="SPODELd.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L17">_ZN8bayesnet7SPODELd3fitERN2at6TensorERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">4</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L44">_ZNK8bayesnet7SPODELd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">18</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L39">_ZN8bayesnet7SPODELd7predictERN2at6TensorE</a></td>
<td class="coverFnHi">68</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L9">_ZN8bayesnet7SPODELd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">84</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L27">_ZN8bayesnet7SPODELd9commonFitERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EERKS7_RSt3mapIS7_S1_IiSaIiEESt4lessIS7_ESaISt4pairISC_SG_EEE</a></td>
<td class="coverFnHi">86</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L8">_ZN8bayesnet7SPODELdC2Ei</a></td>
<td class="coverFnHi">110</td>
</tr>
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<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
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<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">26</td>
<td class="headerCovTableEntry">26</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">6</td>
<td class="headerCovTableEntry">6</td>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="SPODELd.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
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<td class="coverFn"><a href="SPODELd.cc.gcov.html#L17">_ZN8bayesnet7SPODELd3fitERN2at6TensorERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">4</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L9">_ZN8bayesnet7SPODELd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">84</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L39">_ZN8bayesnet7SPODELd7predictERN2at6TensorE</a></td>
<td class="coverFnHi">68</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L27">_ZN8bayesnet7SPODELd9commonFitERKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaIS7_EERKS7_RSt3mapIS7_S1_IiSaIiEESt4lessIS7_ESaISt4pairISC_SG_EEE</a></td>
<td class="coverFnHi">86</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L8">_ZN8bayesnet7SPODELdC2Ei</a></td>
<td class="coverFnHi">110</td>
</tr>
<tr>
<td class="coverFn"><a href="SPODELd.cc.gcov.html#L44">_ZNK8bayesnet7SPODELd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">18</td>
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<td width="5%" class="headerCovTableHead">Coverage</td>
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<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">26</td>
<td class="headerCovTableEntry">26</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">6</td>
<td class="headerCovTableEntry">6</td>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;SPODELd.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 110 : SPODELd::SPODELd(int root) : SPODE(root), Proposal(dataset, features, className) {}</span></span>
<span id="L11"><span class="lineNum"> 11</span> <span class="tlaGNC"> 84 : SPODELd&amp; SPODELd::fit(torch::Tensor&amp; X_, torch::Tensor&amp; y_, const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_)</span></span>
<span id="L12"><span class="lineNum"> 12</span> : {</span>
<span id="L13"><span class="lineNum"> 13</span> <span class="tlaGNC"> 84 : checkInput(X_, y_);</span></span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 84 : Xf = X_;</span></span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 84 : y = y_;</span></span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC"> 84 : return commonFit(features_, className_, states_);</span></span>
<span id="L17"><span class="lineNum"> 17</span> : }</span>
<span id="L18"><span class="lineNum"> 18</span> : </span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 4 : SPODELd&amp; SPODELd::fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_)</span></span>
<span id="L20"><span class="lineNum"> 20</span> : {</span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaGNC"> 4 : if (!torch::is_floating_point(dataset)) {</span></span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 2 : throw std::runtime_error(&quot;Dataset must be a floating point tensor&quot;);</span></span>
<span id="L23"><span class="lineNum"> 23</span> : }</span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 8 : Xf = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), &quot;...&quot; }).clone();</span></span>
<span id="L25"><span class="lineNum"> 25</span> <span class="tlaGNC"> 6 : y = dataset.index({ -1, &quot;...&quot; }).clone().to(torch::kInt32);</span></span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 2 : return commonFit(features_, className_, states_);</span></span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 6 : }</span></span>
<span id="L28"><span class="lineNum"> 28</span> : </span>
<span id="L29"><span class="lineNum"> 29</span> <span class="tlaGNC"> 86 : SPODELd&amp; SPODELd::commonFit(const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_)</span></span>
<span id="L30"><span class="lineNum"> 30</span> : {</span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 86 : features = features_;</span></span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 86 : className = className_;</span></span>
<span id="L33"><span class="lineNum"> 33</span> : // Fills std::vectors Xv &amp; yv with the data from tensors X_ (discretized) &amp; y</span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 86 : states = fit_local_discretization(y);</span></span>
<span id="L35"><span class="lineNum"> 35</span> : // We have discretized the input data</span>
<span id="L36"><span class="lineNum"> 36</span> : // 1st we need to fit the model to build the normal SPODE structure, SPODE::fit initializes the base Bayesian network</span>
<span id="L37"><span class="lineNum"> 37</span> <span class="tlaGNC"> 86 : SPODE::fit(dataset, features, className, states);</span></span>
<span id="L38"><span class="lineNum"> 38</span> <span class="tlaGNC"> 86 : states = localDiscretizationProposal(states, model);</span></span>
<span id="L39"><span class="lineNum"> 39</span> <span class="tlaGNC"> 86 : return *this;</span></span>
<span id="L40"><span class="lineNum"> 40</span> : }</span>
<span id="L41"><span class="lineNum"> 41</span> <span class="tlaGNC"> 68 : torch::Tensor SPODELd::predict(torch::Tensor&amp; X)</span></span>
<span id="L42"><span class="lineNum"> 42</span> : {</span>
<span id="L43"><span class="lineNum"> 43</span> <span class="tlaGNC"> 68 : auto Xt = prepareX(X);</span></span>
<span id="L44"><span class="lineNum"> 44</span> <span class="tlaGNC"> 136 : return SPODE::predict(Xt);</span></span>
<span id="L45"><span class="lineNum"> 45</span> <span class="tlaGNC"> 68 : }</span></span>
<span id="L46"><span class="lineNum"> 46</span> <span class="tlaGNC"> 18 : std::vector&lt;std::string&gt; SPODELd::graph(const std::string&amp; name) const</span></span>
<span id="L47"><span class="lineNum"> 47</span> : {</span>
<span id="L48"><span class="lineNum"> 48</span> <span class="tlaGNC"> 18 : return SPODE::graph(name);</span></span>
<span id="L49"><span class="lineNum"> 49</span> : }</span>
<span id="L50"><span class="lineNum"> 50</span> : }</span>
</pre>
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<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODELd.h<span style="font-size: 80%;"> (<a href="SPODELd.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="SPODELd.h.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
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<td class="coverFn"><a href="SPODELd.h.gcov.html#L14">_ZN8bayesnet7SPODELdD0Ev</a></td>
<td class="coverFnHi">160</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODELd.h.gcov.html#L14">_ZN8bayesnet7SPODELdD0Ev</a></td>
<td class="coverFnAliasHi">78</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODELd.h.gcov.html#L14">_ZN8bayesnet7SPODELdD2Ev</a></td>
<td class="coverFnAliasHi">82</td>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="SPODELd.h.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
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<td class="coverFn"><a href="SPODELd.h.gcov.html#L14">_ZN8bayesnet7SPODELdD0Ev</a></td>
<td class="coverFnHi">160</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODELd.h.gcov.html#L14">_ZN8bayesnet7SPODELdD0Ev</a></td>
<td class="coverFnAliasHi">78</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="SPODELd.h.gcov.html#L14">_ZN8bayesnet7SPODELdD2Ev</a></td>
<td class="coverFnAliasHi">82</td>
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<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - SPODELd.h<span style="font-size: 80%;"> (source / <a href="SPODELd.h.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
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<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef SPODELD_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define SPODELD_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;SPODE.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;Proposal.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : </span>
<span id="L12"><span class="lineNum"> 12</span> : namespace bayesnet {</span>
<span id="L13"><span class="lineNum"> 13</span> : class SPODELd : public SPODE, public Proposal {</span>
<span id="L14"><span class="lineNum"> 14</span> : public:</span>
<span id="L15"><span class="lineNum"> 15</span> : explicit SPODELd(int root);</span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC tlaBgGNC"> 160 : virtual ~SPODELd() = default;</span></span>
<span id="L17"><span class="lineNum"> 17</span> : SPODELd&amp; fit(torch::Tensor&amp; X, torch::Tensor&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L18"><span class="lineNum"> 18</span> : SPODELd&amp; fit(torch::Tensor&amp; dataset, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L19"><span class="lineNum"> 19</span> : SPODELd&amp; commonFit(const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states);</span>
<span id="L20"><span class="lineNum"> 20</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;SPODE&quot;) const override;</span>
<span id="L21"><span class="lineNum"> 21</span> : torch::Tensor predict(torch::Tensor&amp; X) override;</span>
<span id="L22"><span class="lineNum"> 22</span> : static inline std::string version() { return &quot;0.0.1&quot;; };</span>
<span id="L23"><span class="lineNum"> 23</span> : };</span>
<span id="L24"><span class="lineNum"> 24</span> : }</span>
<span id="L25"><span class="lineNum"> 25</span> : #endif // !SPODELD_H</span>
</pre>
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - TAN.cc<span style="font-size: 80%;"> (<a href="TAN.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">23</td>
<td class="headerCovTableEntry">23</td>
</tr>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
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<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<center>
<table cellpadding=1 cellspacing=1 border=0>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="TAN.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
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<td class="coverFn"><a href="TAN.cc.gcov.html#L39">_ZNK8bayesnet3TAN5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">4</td>
</tr>
<tr>
<td class="coverFn"><a href="TAN.cc.gcov.html#L10">_ZN8bayesnet3TAN10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">26</td>
</tr>
<tr>
<td class="coverFn"><a href="TAN.cc.gcov.html#L8">_ZN8bayesnet3TANC2Ev</a></td>
<td class="coverFnHi">94</td>
</tr>
<tr>
<td class="coverFn"><a href="TAN.cc.gcov.html#L23">_ZZN8bayesnet3TAN10buildModelERKN2at6TensorEENKUlRKT_RKT0_E_clISt4pairIifESE_EEDaS7_SA_</a></td>
<td class="coverFnHi">324</td>
</tr>
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/classifiers</a> - TAN.cc<span style="font-size: 80%;"> (<a href="TAN.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">23</td>
<td class="headerCovTableEntry">23</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<table cellpadding=1 cellspacing=1 border=0>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="TAN.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
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<td class="coverFn"><a href="TAN.cc.gcov.html#L10">_ZN8bayesnet3TAN10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">26</td>
</tr>
<tr>
<td class="coverFn"><a href="TAN.cc.gcov.html#L8">_ZN8bayesnet3TANC2Ev</a></td>
<td class="coverFnHi">94</td>
</tr>
<tr>
<td class="coverFn"><a href="TAN.cc.gcov.html#L39">_ZNK8bayesnet3TAN5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">4</td>
</tr>
<tr>
<td class="coverFn"><a href="TAN.cc.gcov.html#L23">_ZZN8bayesnet3TAN10buildModelERKN2at6TensorEENKUlRKT_RKT0_E_clISt4pairIifESE_EEDaS7_SA_</a></td>
<td class="coverFnHi">324</td>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">23</td>
<td class="headerCovTableEntry">23</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;TAN.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 94 : TAN::TAN() : Classifier(Network()) {}</span></span>
<span id="L11"><span class="lineNum"> 11</span> : </span>
<span id="L12"><span class="lineNum"> 12</span> <span class="tlaGNC"> 26 : void TAN::buildModel(const torch::Tensor&amp; weights)</span></span>
<span id="L13"><span class="lineNum"> 13</span> : {</span>
<span id="L14"><span class="lineNum"> 14</span> : // 0. Add all nodes to the model</span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 26 : addNodes();</span></span>
<span id="L16"><span class="lineNum"> 16</span> : // 1. Compute mutual information between each feature and the class and set the root node</span>
<span id="L17"><span class="lineNum"> 17</span> : // as the highest mutual information with the class</span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC"> 26 : auto mi = std::vector &lt;std::pair&lt;int, float &gt;&gt;();</span></span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 78 : torch::Tensor class_dataset = dataset.index({ -1, &quot;...&quot; });</span></span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC"> 178 : for (int i = 0; i &lt; static_cast&lt;int&gt;(features.size()); ++i) {</span></span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaGNC"> 456 : torch::Tensor feature_dataset = dataset.index({ i, &quot;...&quot; });</span></span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 152 : auto mi_value = metrics.mutualInformation(class_dataset, feature_dataset, weights);</span></span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC"> 152 : mi.push_back({ i, mi_value });</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 152 : }</span></span>
<span id="L25"><span class="lineNum"> 25</span> <span class="tlaGNC"> 350 : sort(mi.begin(), mi.end(), [](const auto&amp; left, const auto&amp; right) {return left.second &lt; right.second;});</span></span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 26 : auto root = mi[mi.size() - 1].first;</span></span>
<span id="L27"><span class="lineNum"> 27</span> : // 2. Compute mutual information between each feature and the class</span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 26 : auto weights_matrix = metrics.conditionalEdge(weights);</span></span>
<span id="L29"><span class="lineNum"> 29</span> : // 3. Compute the maximum spanning tree</span>
<span id="L30"><span class="lineNum"> 30</span> <span class="tlaGNC"> 26 : auto mst = metrics.maximumSpanningTree(features, weights_matrix, root);</span></span>
<span id="L31"><span class="lineNum"> 31</span> : // 4. Add edges from the maximum spanning tree to the model</span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 152 : for (auto i = 0; i &lt; mst.size(); ++i) {</span></span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 126 : auto [from, to] = mst[i];</span></span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 126 : model.addEdge(features[from], features[to]);</span></span>
<span id="L35"><span class="lineNum"> 35</span> : }</span>
<span id="L36"><span class="lineNum"> 36</span> : // 5. Add edges from the class to all features</span>
<span id="L37"><span class="lineNum"> 37</span> <span class="tlaGNC"> 178 : for (auto feature : features) {</span></span>
<span id="L38"><span class="lineNum"> 38</span> <span class="tlaGNC"> 152 : model.addEdge(className, feature);</span></span>
<span id="L39"><span class="lineNum"> 39</span> <span class="tlaGNC"> 152 : }</span></span>
<span id="L40"><span class="lineNum"> 40</span> <span class="tlaGNC"> 204 : }</span></span>
<span id="L41"><span class="lineNum"> 41</span> <span class="tlaGNC"> 4 : std::vector&lt;std::string&gt; TAN::graph(const std::string&amp; title) const</span></span>
<span id="L42"><span class="lineNum"> 42</span> : {</span>
<span id="L43"><span class="lineNum"> 43</span> <span class="tlaGNC"> 4 : return model.graph(title);</span></span>
<span id="L44"><span class="lineNum"> 44</span> : }</span>
<span id="L45"><span class="lineNum"> 45</span> : }</span>
</pre>
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View File

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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="TAN.h.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
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<td class="coverFn"><a href="TAN.h.gcov.html#L15">_ZN8bayesnet3TAND0Ev</a></td>
<td class="coverFnHi">38</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="TAN.h.gcov.html#L15">_ZN8bayesnet3TAND0Ev</a></td>
<td class="coverFnAliasHi">6</td>
</tr>
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<td class="coverFnAlias"><a href="TAN.h.gcov.html#L15">_ZN8bayesnet3TAND2Ev</a></td>
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<td width="5%" class="headerCovTableHead">Coverage</td>
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<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<td class="coverFn"><a href="TAN.h.gcov.html#L15">_ZN8bayesnet3TAND0Ev</a></td>
<td class="coverFnHi">38</td>
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<td class="coverFnAlias"><a href="TAN.h.gcov.html#L15">_ZN8bayesnet3TAND0Ev</a></td>
<td class="coverFnAliasHi">6</td>
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<td class="coverFnAlias"><a href="TAN.h.gcov.html#L15">_ZN8bayesnet3TAND2Ev</a></td>
<td class="coverFnAliasHi">32</td>
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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef TAN_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define TAN_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;Classifier.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : namespace bayesnet {</span>
<span id="L11"><span class="lineNum"> 11</span> : class TAN : public Classifier {</span>
<span id="L12"><span class="lineNum"> 12</span> : private:</span>
<span id="L13"><span class="lineNum"> 13</span> : protected:</span>
<span id="L14"><span class="lineNum"> 14</span> : void buildModel(const torch::Tensor&amp; weights) override;</span>
<span id="L15"><span class="lineNum"> 15</span> : public:</span>
<span id="L16"><span class="lineNum"> 16</span> : TAN();</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC tlaBgGNC"> 38 : virtual ~TAN() = default;</span></span>
<span id="L18"><span class="lineNum"> 18</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;TAN&quot;) const override;</span>
<span id="L19"><span class="lineNum"> 19</span> : };</span>
<span id="L20"><span class="lineNum"> 20</span> : }</span>
<span id="L21"><span class="lineNum"> 21</span> : #endif</span>
</pre>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">17</td>
<td class="headerCovTableEntry">17</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td class="coverFn"><a href="TANLd.cc.gcov.html#L30">_ZNK8bayesnet5TANLd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
</tr>
<tr>
<td class="coverFn"><a href="TANLd.cc.gcov.html#L25">_ZN8bayesnet5TANLd7predictERN2at6TensorE</a></td>
<td class="coverFnHi">8</td>
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<td class="coverFn"><a href="TANLd.cc.gcov.html#L9">_ZN8bayesnet5TANLd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="TANLd.cc.gcov.html#L8">_ZN8bayesnet5TANLdC2Ev</a></td>
<td class="coverFnHi">34</td>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">17</td>
<td class="headerCovTableEntry">17</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
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<td class="coverFn"><a href="TANLd.cc.gcov.html#L9">_ZN8bayesnet5TANLd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="TANLd.cc.gcov.html#L25">_ZN8bayesnet5TANLd7predictERN2at6TensorE</a></td>
<td class="coverFnHi">8</td>
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<td class="coverFn"><a href="TANLd.cc.gcov.html#L8">_ZN8bayesnet5TANLdC2Ev</a></td>
<td class="coverFnHi">34</td>
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<td class="coverFn"><a href="TANLd.cc.gcov.html#L30">_ZNK8bayesnet5TANLd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">17</td>
<td class="headerCovTableEntry">17</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;TANLd.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 34 : TANLd::TANLd() : TAN(), Proposal(dataset, features, className) {}</span></span>
<span id="L11"><span class="lineNum"> 11</span> <span class="tlaGNC"> 10 : TANLd&amp; TANLd::fit(torch::Tensor&amp; X_, torch::Tensor&amp; y_, const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_)</span></span>
<span id="L12"><span class="lineNum"> 12</span> : {</span>
<span id="L13"><span class="lineNum"> 13</span> <span class="tlaGNC"> 10 : checkInput(X_, y_);</span></span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 10 : features = features_;</span></span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 10 : className = className_;</span></span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC"> 10 : Xf = X_;</span></span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 10 : y = y_;</span></span>
<span id="L18"><span class="lineNum"> 18</span> : // Fills std::vectors Xv &amp; yv with the data from tensors X_ (discretized) &amp; y</span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 10 : states = fit_local_discretization(y);</span></span>
<span id="L20"><span class="lineNum"> 20</span> : // We have discretized the input data</span>
<span id="L21"><span class="lineNum"> 21</span> : // 1st we need to fit the model to build the normal TAN structure, TAN::fit initializes the base Bayesian network</span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 10 : TAN::fit(dataset, features, className, states);</span></span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC"> 10 : states = localDiscretizationProposal(states, model);</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 10 : return *this;</span></span>
<span id="L25"><span class="lineNum"> 25</span> : </span>
<span id="L26"><span class="lineNum"> 26</span> : }</span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 8 : torch::Tensor TANLd::predict(torch::Tensor&amp; X)</span></span>
<span id="L28"><span class="lineNum"> 28</span> : {</span>
<span id="L29"><span class="lineNum"> 29</span> <span class="tlaGNC"> 8 : auto Xt = prepareX(X);</span></span>
<span id="L30"><span class="lineNum"> 30</span> <span class="tlaGNC"> 16 : return TAN::predict(Xt);</span></span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 8 : }</span></span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 2 : std::vector&lt;std::string&gt; TANLd::graph(const std::string&amp; name) const</span></span>
<span id="L33"><span class="lineNum"> 33</span> : {</span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 2 : return TAN::graph(name);</span></span>
<span id="L35"><span class="lineNum"> 35</span> : }</span>
<span id="L36"><span class="lineNum"> 36</span> : }</span>
</pre>
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<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td class="coverFn"><a href="TANLd.h.gcov.html#L15">_ZN8bayesnet5TANLdD0Ev</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="TANLd.h.gcov.html#L15">_ZN8bayesnet5TANLdD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
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<tr>
<td class="coverFnAlias"><a href="TANLd.h.gcov.html#L15">_ZN8bayesnet5TANLdD2Ev</a></td>
<td class="coverFnAliasHi">6</td>
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<td width="5%" class="headerCovTableHead">Coverage</td>
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<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<td class="coverFn"><a href="TANLd.h.gcov.html#L15">_ZN8bayesnet5TANLdD0Ev</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="TANLd.h.gcov.html#L15">_ZN8bayesnet5TANLdD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
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<tr>
<td class="coverFnAlias"><a href="TANLd.h.gcov.html#L15">_ZN8bayesnet5TANLdD2Ev</a></td>
<td class="coverFnAliasHi">6</td>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef TANLD_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define TANLD_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;TAN.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;Proposal.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : </span>
<span id="L12"><span class="lineNum"> 12</span> : namespace bayesnet {</span>
<span id="L13"><span class="lineNum"> 13</span> : class TANLd : public TAN, public Proposal {</span>
<span id="L14"><span class="lineNum"> 14</span> : private:</span>
<span id="L15"><span class="lineNum"> 15</span> : public:</span>
<span id="L16"><span class="lineNum"> 16</span> : TANLd();</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC tlaBgGNC"> 10 : virtual ~TANLd() = default;</span></span>
<span id="L18"><span class="lineNum"> 18</span> : TANLd&amp; fit(torch::Tensor&amp; X, torch::Tensor&amp; y, const std::vector&lt;std::string&gt;&amp; features, const std::string&amp; className, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states) override;</span>
<span id="L19"><span class="lineNum"> 19</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;TAN&quot;) const override;</span>
<span id="L20"><span class="lineNum"> 20</span> : torch::Tensor predict(torch::Tensor&amp; X) override;</span>
<span id="L21"><span class="lineNum"> 21</span> : static inline std::string version() { return &quot;0.0.1&quot;; };</span>
<span id="L22"><span class="lineNum"> 22</span> : };</span>
<span id="L23"><span class="lineNum"> 23</span> : }</span>
<span id="L24"><span class="lineNum"> 24</span> : #endif // !TANLD_H</span>
</pre>
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<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - BayesNet/bayesnet/classifiers</td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">98.9&nbsp;%</td>
<td class="headerCovTableEntry">369</td>
<td class="headerCovTableEntry">365</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">97.4&nbsp;%</td>
<td class="headerCovTableEntry">76</td>
<td class="headerCovTableEntry">74</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td width="40%"><br></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
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<td class="tableHead" rowspan=2>Filename <span title="Click to sort table by file name" class="tableHeadSort"><a href="index.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by file name" title="Click to sort table by file name" border=0></a></span></td>
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<td class="tableHead" colspan=2> Rate</td>
<td class="tableHead"> Total</td>
<td class="tableHead"> Hit</td>
<td class="tableHead"> Rate</td>
<td class="tableHead"> Total</td>
<td class="tableHead"> Hit</td>
</tr>
<tr>
<td class="coverFile"><a href="Classifier.h.gcov.html">Classifier.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
<td class="coverPerMed">80.0&nbsp;%</td>
<td class="coverNumDflt">5</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="Proposal.cc.gcov.html">Proposal.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=98 height=10 alt="97.7%"><img src="../../../snow.png" width=2 height=10 alt="97.7%"></td></tr></table>
</td>
<td class="coverPerHi">97.7&nbsp;%</td>
<td class="coverNumDflt">86</td>
<td class="coverNumDflt">84</td>
<td class="coverPerMed">88.9&nbsp;%</td>
<td class="coverNumDflt">9</td>
<td class="coverNumDflt">8</td>
</tr>
<tr>
<td class="coverFile"><a href="KDB.h.gcov.html">KDB.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="KDBLd.h.gcov.html">KDBLd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODE.h.gcov.html">SPODE.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODELd.h.gcov.html">SPODELd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="TAN.h.gcov.html">TAN.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="TANLd.h.gcov.html">TANLd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODE.cc.gcov.html">SPODE.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">10</td>
<td class="coverNumDflt">10</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">3</td>
<td class="coverNumDflt">3</td>
</tr>
<tr>
<td class="coverFile"><a href="KDBLd.cc.gcov.html">KDBLd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">17</td>
<td class="coverNumDflt">17</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="TAN.cc.gcov.html">TAN.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">23</td>
<td class="coverNumDflt">23</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="TANLd.cc.gcov.html">TANLd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">17</td>
<td class="coverNumDflt">17</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="KDB.cc.gcov.html">KDB.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=96 height=10 alt="96.3%"><img src="../../../snow.png" width=4 height=10 alt="96.3%"></td></tr></table>
</td>
<td class="coverPerHi">96.3&nbsp;%</td>
<td class="coverNumDflt">54</td>
<td class="coverNumDflt">52</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">5</td>
<td class="coverNumDflt">5</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODELd.cc.gcov.html">SPODELd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">26</td>
<td class="coverNumDflt">26</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">6</td>
<td class="coverNumDflt">6</td>
</tr>
<tr>
<td class="coverFile"><a href="Classifier.cc.gcov.html">Classifier.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">126</td>
<td class="coverNumDflt">126</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">24</td>
<td class="coverNumDflt">24</td>
</tr>
</table>
</center>
<br>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
</html>

View File

@@ -1,273 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - BayesNet/bayesnet/classifiers</td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">98.9&nbsp;%</td>
<td class="headerCovTableEntry">369</td>
<td class="headerCovTableEntry">365</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">97.4&nbsp;%</td>
<td class="headerCovTableEntry">76</td>
<td class="headerCovTableEntry">74</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table width="80%" cellpadding=1 cellspacing=1 border=0>
<tr>
<td width="40%"><br></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
</tr>
<tr>
<td class="tableHead" rowspan=2>Filename <span title="Click to sort table by file name" class="tableHeadSort"><a href="index.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by file name" title="Click to sort table by file name" border=0></a></span></td>
<td class="tableHead" colspan=4>Line Coverage <span title="Click to sort table by line coverage" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by line coverage" title="Click to sort table by line coverage" border=0></span></td>
<td class="tableHead" colspan=3>Function Coverage <span title="Click to sort table by function coverage" class="tableHeadSort"><a href="index-sort-f.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function coverage" title="Click to sort table by function coverage" border=0></a></span></td>
</tr>
<tr>
<td class="tableHead" colspan=2> Rate</td>
<td class="tableHead"> Total</td>
<td class="tableHead"> Hit</td>
<td class="tableHead"> Rate</td>
<td class="tableHead"> Total</td>
<td class="tableHead"> Hit</td>
</tr>
<tr>
<td class="coverFile"><a href="KDB.cc.gcov.html">KDB.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=96 height=10 alt="96.3%"><img src="../../../snow.png" width=4 height=10 alt="96.3%"></td></tr></table>
</td>
<td class="coverPerHi">96.3&nbsp;%</td>
<td class="coverNumDflt">54</td>
<td class="coverNumDflt">52</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">5</td>
<td class="coverNumDflt">5</td>
</tr>
<tr>
<td class="coverFile"><a href="Proposal.cc.gcov.html">Proposal.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=98 height=10 alt="97.7%"><img src="../../../snow.png" width=2 height=10 alt="97.7%"></td></tr></table>
</td>
<td class="coverPerHi">97.7&nbsp;%</td>
<td class="coverNumDflt">86</td>
<td class="coverNumDflt">84</td>
<td class="coverPerMed">88.9&nbsp;%</td>
<td class="coverNumDflt">9</td>
<td class="coverNumDflt">8</td>
</tr>
<tr>
<td class="coverFile"><a href="KDB.h.gcov.html">KDB.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="KDBLd.h.gcov.html">KDBLd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODE.h.gcov.html">SPODE.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODELd.h.gcov.html">SPODELd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="TAN.h.gcov.html">TAN.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="TANLd.h.gcov.html">TANLd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="Classifier.h.gcov.html">Classifier.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
<td class="coverPerMed">80.0&nbsp;%</td>
<td class="coverNumDflt">5</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODE.cc.gcov.html">SPODE.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">10</td>
<td class="coverNumDflt">10</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">3</td>
<td class="coverNumDflt">3</td>
</tr>
<tr>
<td class="coverFile"><a href="KDBLd.cc.gcov.html">KDBLd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">17</td>
<td class="coverNumDflt">17</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="TANLd.cc.gcov.html">TANLd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">17</td>
<td class="coverNumDflt">17</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="TAN.cc.gcov.html">TAN.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">23</td>
<td class="coverNumDflt">23</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODELd.cc.gcov.html">SPODELd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">26</td>
<td class="coverNumDflt">26</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">6</td>
<td class="coverNumDflt">6</td>
</tr>
<tr>
<td class="coverFile"><a href="Classifier.cc.gcov.html">Classifier.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">126</td>
<td class="coverNumDflt">126</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">24</td>
<td class="coverNumDflt">24</td>
</tr>
</table>
</center>
<br>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
</html>

View File

@@ -1,273 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/classifiers</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - BayesNet/bayesnet/classifiers</td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">98.9&nbsp;%</td>
<td class="headerCovTableEntry">369</td>
<td class="headerCovTableEntry">365</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">97.4&nbsp;%</td>
<td class="headerCovTableEntry">76</td>
<td class="headerCovTableEntry">74</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table width="80%" cellpadding=1 cellspacing=1 border=0>
<tr>
<td width="40%"><br></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
<td width="8%"></td>
</tr>
<tr>
<td class="tableHead" rowspan=2>Filename <span title="Click to sort table by file name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by file name" title="Click to sort table by file name" border=0></span></td>
<td class="tableHead" colspan=4>Line Coverage <span title="Click to sort table by line coverage" class="tableHeadSort"><a href="index-sort-l.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by line coverage" title="Click to sort table by line coverage" border=0></a></span></td>
<td class="tableHead" colspan=3>Function Coverage <span title="Click to sort table by function coverage" class="tableHeadSort"><a href="index-sort-f.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function coverage" title="Click to sort table by function coverage" border=0></a></span></td>
</tr>
<tr>
<td class="tableHead" colspan=2> Rate</td>
<td class="tableHead"> Total</td>
<td class="tableHead"> Hit</td>
<td class="tableHead"> Rate</td>
<td class="tableHead"> Total</td>
<td class="tableHead"> Hit</td>
</tr>
<tr>
<td class="coverFile"><a href="Classifier.cc.gcov.html">Classifier.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">126</td>
<td class="coverNumDflt">126</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">24</td>
<td class="coverNumDflt">24</td>
</tr>
<tr>
<td class="coverFile"><a href="Classifier.h.gcov.html">Classifier.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
<td class="coverPerMed">80.0&nbsp;%</td>
<td class="coverNumDflt">5</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="KDB.cc.gcov.html">KDB.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=96 height=10 alt="96.3%"><img src="../../../snow.png" width=4 height=10 alt="96.3%"></td></tr></table>
</td>
<td class="coverPerHi">96.3&nbsp;%</td>
<td class="coverNumDflt">54</td>
<td class="coverNumDflt">52</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">5</td>
<td class="coverNumDflt">5</td>
</tr>
<tr>
<td class="coverFile"><a href="KDB.h.gcov.html">KDB.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="KDBLd.cc.gcov.html">KDBLd.cc</a></td>
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<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
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<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">17</td>
<td class="coverNumDflt">17</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="KDBLd.h.gcov.html">KDBLd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="Proposal.cc.gcov.html">Proposal.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=98 height=10 alt="97.7%"><img src="../../../snow.png" width=2 height=10 alt="97.7%"></td></tr></table>
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<td class="coverPerHi">97.7&nbsp;%</td>
<td class="coverNumDflt">86</td>
<td class="coverNumDflt">84</td>
<td class="coverPerMed">88.9&nbsp;%</td>
<td class="coverNumDflt">9</td>
<td class="coverNumDflt">8</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODE.cc.gcov.html">SPODE.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">10</td>
<td class="coverNumDflt">10</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">3</td>
<td class="coverNumDflt">3</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODE.h.gcov.html">SPODE.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
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<tr>
<td class="coverFile"><a href="SPODELd.cc.gcov.html">SPODELd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">26</td>
<td class="coverNumDflt">26</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">6</td>
<td class="coverNumDflt">6</td>
</tr>
<tr>
<td class="coverFile"><a href="SPODELd.h.gcov.html">SPODELd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
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<tr>
<td class="coverFile"><a href="TAN.cc.gcov.html">TAN.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
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<td class="coverPerHi">100.0&nbsp;%</td>
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<td class="coverNumDflt">23</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="TAN.h.gcov.html">TAN.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
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<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
</tr>
<tr>
<td class="coverFile"><a href="TANLd.cc.gcov.html">TANLd.cc</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">17</td>
<td class="coverNumDflt">17</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">4</td>
<td class="coverNumDflt">4</td>
</tr>
<tr>
<td class="coverFile"><a href="TANLd.h.gcov.html">TANLd.h</a></td>
<td class="coverBar" align="center">
<table border=0 cellspacing=0 cellpadding=1><tr><td class="coverBarOutline"><img src="../../../emerald.png" width=100 height=10 alt="100.0%"></td></tr></table>
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<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">1</td>
<td class="coverNumDflt">1</td>
<td class="coverPerHi">100.0&nbsp;%</td>
<td class="coverNumDflt">2</td>
<td class="coverNumDflt">2</td>
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODE.cc<span style="font-size: 80%;"> (<a href="AODE.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">20</td>
<td class="headerCovTableEntry">20</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
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<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="AODE.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
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<td class="coverFn"><a href="AODE.cc.gcov.html#L13">_ZN8bayesnet4AODE18setHyperparametersERKN8nlohmann16json_abi_v3_11_310basic_jsonISt3mapSt6vectorNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEblmdSaNS2_14adl_serializerES5_IhSaIhEEvEE</a></td>
<td class="coverFnHi">2</td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L32">_ZNK8bayesnet4AODE5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L22">_ZN8bayesnet4AODE10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">12</td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L8">_ZN8bayesnet4AODEC2Eb</a></td>
<td class="coverFnHi">38</td>
</tr>
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<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODE.cc<span style="font-size: 80%;"> (<a href="AODE.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">20</td>
<td class="headerCovTableEntry">20</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="AODE.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L22">_ZN8bayesnet4AODE10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">12</td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L13">_ZN8bayesnet4AODE18setHyperparametersERKN8nlohmann16json_abi_v3_11_310basic_jsonISt3mapSt6vectorNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEblmdSaNS2_14adl_serializerES5_IhSaIhEEvEE</a></td>
<td class="coverFnHi">2</td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L8">_ZN8bayesnet4AODEC2Eb</a></td>
<td class="coverFnHi">38</td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.cc.gcov.html#L32">_ZNK8bayesnet4AODE5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
</tr>
</table>
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View File

@@ -1,114 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
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<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
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<td width="100%">
<table cellpadding=1 border=0 width="100%">
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<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODE.cc<span style="font-size: 80%;"> (source / <a href="AODE.cc.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">20</td>
<td class="headerCovTableEntry">20</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">4</td>
<td class="headerCovTableEntry">4</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
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<td><br></td>
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<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;AODE.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 38 : AODE::AODE(bool predict_voting) : Ensemble(predict_voting)</span></span>
<span id="L11"><span class="lineNum"> 11</span> : {</span>
<span id="L12"><span class="lineNum"> 12</span> <span class="tlaGNC"> 76 : validHyperparameters = { &quot;predict_voting&quot; };</span></span>
<span id="L13"><span class="lineNum"> 13</span> : </span>
<span id="L14"><span class="lineNum"> 14</span> <span class="tlaGNC"> 114 : }</span></span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 2 : void AODE::setHyperparameters(const nlohmann::json&amp; hyperparameters_)</span></span>
<span id="L16"><span class="lineNum"> 16</span> : {</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 2 : auto hyperparameters = hyperparameters_;</span></span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC"> 2 : if (hyperparameters.contains(&quot;predict_voting&quot;)) {</span></span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 2 : predict_voting = hyperparameters[&quot;predict_voting&quot;];</span></span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC"> 2 : hyperparameters.erase(&quot;predict_voting&quot;);</span></span>
<span id="L21"><span class="lineNum"> 21</span> : }</span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 2 : Classifier::setHyperparameters(hyperparameters);</span></span>
<span id="L23"><span class="lineNum"> 23</span> <span class="tlaGNC"> 2 : }</span></span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 12 : void AODE::buildModel(const torch::Tensor&amp; weights)</span></span>
<span id="L25"><span class="lineNum"> 25</span> : {</span>
<span id="L26"><span class="lineNum"> 26</span> <span class="tlaGNC"> 12 : models.clear();</span></span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 12 : significanceModels.clear();</span></span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 94 : for (int i = 0; i &lt; features.size(); ++i) {</span></span>
<span id="L29"><span class="lineNum"> 29</span> <span class="tlaGNC"> 82 : models.push_back(std::make_unique&lt;SPODE&gt;(i));</span></span>
<span id="L30"><span class="lineNum"> 30</span> : }</span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 12 : n_models = models.size();</span></span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 12 : significanceModels = std::vector&lt;double&gt;(n_models, 1.0);</span></span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 12 : }</span></span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 2 : std::vector&lt;std::string&gt; AODE::graph(const std::string&amp; title) const</span></span>
<span id="L35"><span class="lineNum"> 35</span> : {</span>
<span id="L36"><span class="lineNum"> 36</span> <span class="tlaGNC"> 2 : return Ensemble::graph(title);</span></span>
<span id="L37"><span class="lineNum"> 37</span> : }</span>
<span id="L38"><span class="lineNum"> 38</span> : }</span>
</pre>
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<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODE.h<span style="font-size: 80%;"> (<a href="AODE.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="AODE.h.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.h.gcov.html#L13">_ZN8bayesnet4AODED0Ev</a></td>
<td class="coverFnHi">14</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODE.h.gcov.html#L13">_ZN8bayesnet4AODED0Ev</a></td>
<td class="coverFnAliasHi">4</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODE.h.gcov.html#L13">_ZN8bayesnet4AODED2Ev</a></td>
<td class="coverFnAliasHi">10</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
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View File

@@ -1,96 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/ensembles/AODE.h - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODE.h<span style="font-size: 80%;"> (<a href="AODE.h.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="AODE.h.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="AODE.h.gcov.html#L13">_ZN8bayesnet4AODED0Ev</a></td>
<td class="coverFnHi">14</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODE.h.gcov.html#L13">_ZN8bayesnet4AODED0Ev</a></td>
<td class="coverFnAliasHi">4</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODE.h.gcov.html#L13">_ZN8bayesnet4AODED2Ev</a></td>
<td class="coverFnAliasHi">10</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
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View File

@@ -1,98 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/ensembles/AODE.h</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODE.h<span style="font-size: 80%;"> (source / <a href="AODE.h.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
</tr>
<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef AODE_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define AODE_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;bayesnet/classifiers/SPODE.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;Ensemble.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : namespace bayesnet {</span>
<span id="L12"><span class="lineNum"> 12</span> : class AODE : public Ensemble {</span>
<span id="L13"><span class="lineNum"> 13</span> : public:</span>
<span id="L14"><span class="lineNum"> 14</span> : AODE(bool predict_voting = false);</span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC tlaBgGNC"> 14 : virtual ~AODE() {};</span></span>
<span id="L16"><span class="lineNum"> 16</span> : void setHyperparameters(const nlohmann::json&amp; hyperparameters) override;</span>
<span id="L17"><span class="lineNum"> 17</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; title = &quot;AODE&quot;) const override;</span>
<span id="L18"><span class="lineNum"> 18</span> : protected:</span>
<span id="L19"><span class="lineNum"> 19</span> : void buildModel(const torch::Tensor&amp; weights) override;</span>
<span id="L20"><span class="lineNum"> 20</span> : };</span>
<span id="L21"><span class="lineNum"> 21</span> : }</span>
<span id="L22"><span class="lineNum"> 22</span> : #endif</span>
</pre>
</td>
</tr>
</table>
<br>
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View File

@@ -1,110 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/ensembles/AODELd.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODELd.cc<span style="font-size: 80%;"> (<a href="AODELd.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">24</td>
<td class="headerCovTableEntry">24</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">5</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="AODELd.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></span></td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L41">_ZNK8bayesnet6AODELd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L26">_ZN8bayesnet6AODELd10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L35">_ZN8bayesnet6AODELd10trainModelERKN2at6TensorE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L11">_ZN8bayesnet6AODELd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L8">_ZN8bayesnet6AODELdC2Eb</a></td>
<td class="coverFnHi">34</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
</table>
<br>
</body>
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View File

@@ -1,110 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/ensembles/AODELd.cc - functions</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODELd.cc<span style="font-size: 80%;"> (<a href="AODELd.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">24</td>
<td class="headerCovTableEntry">24</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">5</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<center>
<table cellpadding=1 cellspacing=1 border=0>
<tr><td><br></td></tr>
<tr>
<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><img src="../../../glass.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></span></td>
<td class="tableHead">Hit count <span title="Click to sort table by function hit count" class="tableHeadSort"><a href="AODELd.cc.func-c.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function hit count" title="Click to sort table by function hit count" border=0></a></span></td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L26">_ZN8bayesnet6AODELd10buildModelERKN2at6TensorE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L35">_ZN8bayesnet6AODELd10trainModelERKN2at6TensorE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L11">_ZN8bayesnet6AODELd3fitERN2at6TensorES3_RKSt6vectorINSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEESaISA_EERKSA_RSt3mapISA_S4_IiSaIiEESt4lessISA_ESaISt4pairISF_SJ_EEE</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L8">_ZN8bayesnet6AODELdC2Eb</a></td>
<td class="coverFnHi">34</td>
</tr>
<tr>
<td class="coverFn"><a href="AODELd.cc.gcov.html#L41">_ZNK8bayesnet6AODELd5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
</tr>
</table>
<br>
</center>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr><td class="versionInfo">Generated by: <a href="https://github.com//linux-test-project/lcov" target="_parent">LCOV version 2.0-1</a></td></tr>
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</body>
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View File

@@ -1,123 +0,0 @@
<!DOCTYPE HTML PUBLIC "-//W3C//DTD HTML 4.01 Transitional//EN">
<html lang="en">
<head>
<meta http-equiv="Content-Type" content="text/html; charset=UTF-8">
<title>LCOV - coverage.info - BayesNet/bayesnet/ensembles/AODELd.cc</title>
<link rel="stylesheet" type="text/css" href="../../../gcov.css">
</head>
<body>
<table width="100%" border=0 cellspacing=0 cellpadding=0>
<tr><td class="title">LCOV - code coverage report</td></tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
<tr>
<td width="100%">
<table cellpadding=1 border=0 width="100%">
<tr>
<td width="10%" class="headerItem">Current view:</td>
<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - AODELd.cc<span style="font-size: 80%;"> (source / <a href="AODELd.cc.func-c.html">functions</a>)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">24</td>
<td class="headerCovTableEntry">24</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">5</td>
<td class="headerCovTableEntry">5</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
</td>
</tr>
<tr><td class="ruler"><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
<table cellpadding=0 cellspacing=0 border=0>
<tr>
<td><br></td>
</tr>
<tr>
<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &quot;AODELd.h&quot;</span>
<span id="L8"><span class="lineNum"> 8</span> : </span>
<span id="L9"><span class="lineNum"> 9</span> : namespace bayesnet {</span>
<span id="L10"><span class="lineNum"> 10</span> <span class="tlaGNC tlaBgGNC"> 34 : AODELd::AODELd(bool predict_voting) : Ensemble(predict_voting), Proposal(dataset, features, className)</span></span>
<span id="L11"><span class="lineNum"> 11</span> : {</span>
<span id="L12"><span class="lineNum"> 12</span> <span class="tlaGNC"> 34 : }</span></span>
<span id="L13"><span class="lineNum"> 13</span> <span class="tlaGNC"> 10 : AODELd&amp; AODELd::fit(torch::Tensor&amp; X_, torch::Tensor&amp; y_, const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_)</span></span>
<span id="L14"><span class="lineNum"> 14</span> : {</span>
<span id="L15"><span class="lineNum"> 15</span> <span class="tlaGNC"> 10 : checkInput(X_, y_);</span></span>
<span id="L16"><span class="lineNum"> 16</span> <span class="tlaGNC"> 10 : features = features_;</span></span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC"> 10 : className = className_;</span></span>
<span id="L18"><span class="lineNum"> 18</span> <span class="tlaGNC"> 10 : Xf = X_;</span></span>
<span id="L19"><span class="lineNum"> 19</span> <span class="tlaGNC"> 10 : y = y_;</span></span>
<span id="L20"><span class="lineNum"> 20</span> : // Fills std::vectors Xv &amp; yv with the data from tensors X_ (discretized) &amp; y</span>
<span id="L21"><span class="lineNum"> 21</span> <span class="tlaGNC"> 10 : states = fit_local_discretization(y);</span></span>
<span id="L22"><span class="lineNum"> 22</span> : // We have discretized the input data</span>
<span id="L23"><span class="lineNum"> 23</span> : // 1st we need to fit the model to build the normal TAN structure, TAN::fit initializes the base Bayesian network</span>
<span id="L24"><span class="lineNum"> 24</span> <span class="tlaGNC"> 10 : Ensemble::fit(dataset, features, className, states);</span></span>
<span id="L25"><span class="lineNum"> 25</span> <span class="tlaGNC"> 10 : return *this;</span></span>
<span id="L26"><span class="lineNum"> 26</span> : </span>
<span id="L27"><span class="lineNum"> 27</span> : }</span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 10 : void AODELd::buildModel(const torch::Tensor&amp; weights)</span></span>
<span id="L29"><span class="lineNum"> 29</span> : {</span>
<span id="L30"><span class="lineNum"> 30</span> <span class="tlaGNC"> 10 : models.clear();</span></span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 84 : for (int i = 0; i &lt; features.size(); ++i) {</span></span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 74 : models.push_back(std::make_unique&lt;SPODELd&gt;(i));</span></span>
<span id="L33"><span class="lineNum"> 33</span> : }</span>
<span id="L34"><span class="lineNum"> 34</span> <span class="tlaGNC"> 10 : n_models = models.size();</span></span>
<span id="L35"><span class="lineNum"> 35</span> <span class="tlaGNC"> 10 : significanceModels = std::vector&lt;double&gt;(n_models, 1.0);</span></span>
<span id="L36"><span class="lineNum"> 36</span> <span class="tlaGNC"> 10 : }</span></span>
<span id="L37"><span class="lineNum"> 37</span> <span class="tlaGNC"> 10 : void AODELd::trainModel(const torch::Tensor&amp; weights)</span></span>
<span id="L38"><span class="lineNum"> 38</span> : {</span>
<span id="L39"><span class="lineNum"> 39</span> <span class="tlaGNC"> 84 : for (const auto&amp; model : models) {</span></span>
<span id="L40"><span class="lineNum"> 40</span> <span class="tlaGNC"> 74 : model-&gt;fit(Xf, y, features, className, states);</span></span>
<span id="L41"><span class="lineNum"> 41</span> : }</span>
<span id="L42"><span class="lineNum"> 42</span> <span class="tlaGNC"> 10 : }</span></span>
<span id="L43"><span class="lineNum"> 43</span> <span class="tlaGNC"> 2 : std::vector&lt;std::string&gt; AODELd::graph(const std::string&amp; name) const</span></span>
<span id="L44"><span class="lineNum"> 44</span> : {</span>
<span id="L45"><span class="lineNum"> 45</span> <span class="tlaGNC"> 2 : return Ensemble::graph(name);</span></span>
<span id="L46"><span class="lineNum"> 46</span> : }</span>
<span id="L47"><span class="lineNum"> 47</span> : }</span>
</pre>
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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td class="coverFn"><a href="AODELd.h.gcov.html#L15">_ZN8bayesnet6AODELdD0Ev</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODELd.h.gcov.html#L15">_ZN8bayesnet6AODELdD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODELd.h.gcov.html#L15">_ZN8bayesnet6AODELdD2Ev</a></td>
<td class="coverFnAliasHi">6</td>
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<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<td class="coverFn"><a href="AODELd.h.gcov.html#L15">_ZN8bayesnet6AODELdD0Ev</a></td>
<td class="coverFnHi">10</td>
</tr>
<tr>
<td class="coverFnAlias"><a href="AODELd.h.gcov.html#L15">_ZN8bayesnet6AODELdD0Ev</a></td>
<td class="coverFnAliasHi">4</td>
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<tr>
<td class="coverFnAlias"><a href="AODELd.h.gcov.html#L15">_ZN8bayesnet6AODELdD2Ev</a></td>
<td class="coverFnAliasHi">6</td>
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<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
</table>
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<td>
<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #ifndef AODELD_H</span>
<span id="L8"><span class="lineNum"> 8</span> : #define AODELD_H</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &quot;bayesnet/classifiers/Proposal.h&quot;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &quot;bayesnet/classifiers/SPODELd.h&quot;</span>
<span id="L11"><span class="lineNum"> 11</span> : #include &quot;Ensemble.h&quot;</span>
<span id="L12"><span class="lineNum"> 12</span> : </span>
<span id="L13"><span class="lineNum"> 13</span> : namespace bayesnet {</span>
<span id="L14"><span class="lineNum"> 14</span> : class AODELd : public Ensemble, public Proposal {</span>
<span id="L15"><span class="lineNum"> 15</span> : public:</span>
<span id="L16"><span class="lineNum"> 16</span> : AODELd(bool predict_voting = true);</span>
<span id="L17"><span class="lineNum"> 17</span> <span class="tlaGNC tlaBgGNC"> 10 : virtual ~AODELd() = default;</span></span>
<span id="L18"><span class="lineNum"> 18</span> : AODELd&amp; fit(torch::Tensor&amp; X_, torch::Tensor&amp; y_, const std::vector&lt;std::string&gt;&amp; features_, const std::string&amp; className_, map&lt;std::string, std::vector&lt;int&gt;&gt;&amp; states_) override;</span>
<span id="L19"><span class="lineNum"> 19</span> : std::vector&lt;std::string&gt; graph(const std::string&amp; name = &quot;AODELd&quot;) const override;</span>
<span id="L20"><span class="lineNum"> 20</span> : protected:</span>
<span id="L21"><span class="lineNum"> 21</span> : void trainModel(const torch::Tensor&amp; weights) override;</span>
<span id="L22"><span class="lineNum"> 22</span> : void buildModel(const torch::Tensor&amp; weights) override;</span>
<span id="L23"><span class="lineNum"> 23</span> : };</span>
<span id="L24"><span class="lineNum"> 24</span> : }</span>
<span id="L25"><span class="lineNum"> 25</span> : #endif // !AODELD_H</span>
</pre>
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<td width="100%">
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<td width="10%" class="headerValue"><a href="../../../index.html">top level</a> - <a href="index.html">BayesNet/bayesnet/ensembles</a> - BoostAODE.cc<span style="font-size: 80%;"> (<a href="BoostAODE.cc.gcov.html">source</a> / functions)</span></td>
<td width="5%"></td>
<td width="5%"></td>
<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
</tr>
<tr>
<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">98.3&nbsp;%</td>
<td class="headerCovTableEntry">237</td>
<td class="headerCovTableEntry">233</td>
</tr>
<tr>
<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">9</td>
<td class="headerCovTableEntry">9</td>
</tr>
<tr><td><img src="../../../glass.png" width=3 height=3 alt=""></td></tr>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="BoostAODE.cc.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
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<td class="coverFn"><a href="BoostAODE.cc.gcov.html#L390">_ZNK8bayesnet9BoostAODE5graphERKNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEE</a></td>
<td class="coverFnHi">2</td>
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<td class="coverFn"><a href="BoostAODE.cc.gcov.html#L137">_ZN8bayesnet9BoostAODE20update_weights_blockEiRN2at6TensorES3_</a></td>
<td class="coverFnHi">14</td>
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<td class="coverFn"><a href="BoostAODE.cc.gcov.html#L233">_ZN8bayesnet9BoostAODE16initializeModelsEv</a></td>
<td class="coverFnHi">16</td>
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<td class="coverFn"><a href="BoostAODE.cc.gcov.html#L57">_ZN8bayesnet9BoostAODE18setHyperparametersERKN8nlohmann16json_abi_v3_11_310basic_jsonISt3mapSt6vectorNSt7__cxx1112basic_stringIcSt11char_traitsIcESaIcEEEblmdSaNS2_14adl_serializerES5_IhSaIhEEvEE</a></td>
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<td class="coverFn"><a href="BoostAODE.cc.gcov.html#L18">_ZN8bayesnet9BoostAODEC2Eb</a></td>
<td class="coverFnHi">84</td>
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<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">9</td>
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<td class="coverFnHi">14</td>
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<td class="coverFn"><a href="BoostAODE.cc.gcov.html#L18">_ZN8bayesnet9BoostAODEC2Eb</a></td>
<td class="coverFnHi">84</td>
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<td class="coverFnHi">2</td>
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</tr>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
<td></td>
<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">98.3&nbsp;%</td>
<td class="headerCovTableEntry">237</td>
<td class="headerCovTableEntry">233</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
<td></td>
<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">9</td>
<td class="headerCovTableEntry">9</td>
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<pre class="sourceHeading"> Line data Source code</pre>
<pre class="source">
<span id="L1"><span class="lineNum"> 1</span> : // ***************************************************************</span>
<span id="L2"><span class="lineNum"> 2</span> : // SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez</span>
<span id="L3"><span class="lineNum"> 3</span> : // SPDX-FileType: SOURCE</span>
<span id="L4"><span class="lineNum"> 4</span> : // SPDX-License-Identifier: MIT</span>
<span id="L5"><span class="lineNum"> 5</span> : // ***************************************************************</span>
<span id="L6"><span class="lineNum"> 6</span> : </span>
<span id="L7"><span class="lineNum"> 7</span> : #include &lt;set&gt;</span>
<span id="L8"><span class="lineNum"> 8</span> : #include &lt;functional&gt;</span>
<span id="L9"><span class="lineNum"> 9</span> : #include &lt;limits.h&gt;</span>
<span id="L10"><span class="lineNum"> 10</span> : #include &lt;tuple&gt;</span>
<span id="L11"><span class="lineNum"> 11</span> : #include &lt;folding.hpp&gt;</span>
<span id="L12"><span class="lineNum"> 12</span> : #include &quot;bayesnet/feature_selection/CFS.h&quot;</span>
<span id="L13"><span class="lineNum"> 13</span> : #include &quot;bayesnet/feature_selection/FCBF.h&quot;</span>
<span id="L14"><span class="lineNum"> 14</span> : #include &quot;bayesnet/feature_selection/IWSS.h&quot;</span>
<span id="L15"><span class="lineNum"> 15</span> : #include &quot;BoostAODE.h&quot;</span>
<span id="L16"><span class="lineNum"> 16</span> : #include &quot;lib/log/loguru.cpp&quot;</span>
<span id="L17"><span class="lineNum"> 17</span> : </span>
<span id="L18"><span class="lineNum"> 18</span> : namespace bayesnet {</span>
<span id="L19"><span class="lineNum"> 19</span> : </span>
<span id="L20"><span class="lineNum"> 20</span> <span class="tlaGNC tlaBgGNC"> 84 : BoostAODE::BoostAODE(bool predict_voting) : Ensemble(predict_voting)</span></span>
<span id="L21"><span class="lineNum"> 21</span> : {</span>
<span id="L22"><span class="lineNum"> 22</span> <span class="tlaGNC"> 924 : validHyperparameters = {</span></span>
<span id="L23"><span class="lineNum"> 23</span> : &quot;maxModels&quot;, &quot;bisection&quot;, &quot;order&quot;, &quot;convergence&quot;, &quot;convergence_best&quot;, &quot;threshold&quot;,</span>
<span id="L24"><span class="lineNum"> 24</span> : &quot;select_features&quot;, &quot;maxTolerance&quot;, &quot;predict_voting&quot;, &quot;block_update&quot;</span>
<span id="L25"><span class="lineNum"> 25</span> <span class="tlaGNC"> 924 : };</span></span>
<span id="L26"><span class="lineNum"> 26</span> : </span>
<span id="L27"><span class="lineNum"> 27</span> <span class="tlaGNC"> 252 : }</span></span>
<span id="L28"><span class="lineNum"> 28</span> <span class="tlaGNC"> 46 : void BoostAODE::buildModel(const torch::Tensor&amp; weights)</span></span>
<span id="L29"><span class="lineNum"> 29</span> : {</span>
<span id="L30"><span class="lineNum"> 30</span> : // Models shall be built in trainModel</span>
<span id="L31"><span class="lineNum"> 31</span> <span class="tlaGNC"> 46 : models.clear();</span></span>
<span id="L32"><span class="lineNum"> 32</span> <span class="tlaGNC"> 46 : significanceModels.clear();</span></span>
<span id="L33"><span class="lineNum"> 33</span> <span class="tlaGNC"> 46 : n_models = 0;</span></span>
<span id="L34"><span class="lineNum"> 34</span> : // Prepare the validation dataset</span>
<span id="L35"><span class="lineNum"> 35</span> <span class="tlaGNC"> 138 : auto y_ = dataset.index({ -1, &quot;...&quot; });</span></span>
<span id="L36"><span class="lineNum"> 36</span> <span class="tlaGNC"> 46 : if (convergence) {</span></span>
<span id="L37"><span class="lineNum"> 37</span> : // Prepare train &amp; validation sets from train data</span>
<span id="L38"><span class="lineNum"> 38</span> <span class="tlaGNC"> 38 : auto fold = folding::StratifiedKFold(5, y_, 271);</span></span>
<span id="L39"><span class="lineNum"> 39</span> <span class="tlaGNC"> 38 : auto [train, test] = fold.getFold(0);</span></span>
<span id="L40"><span class="lineNum"> 40</span> <span class="tlaGNC"> 38 : auto train_t = torch::tensor(train);</span></span>
<span id="L41"><span class="lineNum"> 41</span> <span class="tlaGNC"> 38 : auto test_t = torch::tensor(test);</span></span>
<span id="L42"><span class="lineNum"> 42</span> : // Get train and validation sets</span>
<span id="L43"><span class="lineNum"> 43</span> <span class="tlaGNC"> 190 : X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), train_t });</span></span>
<span id="L44"><span class="lineNum"> 44</span> <span class="tlaGNC"> 114 : y_train = dataset.index({ -1, train_t });</span></span>
<span id="L45"><span class="lineNum"> 45</span> <span class="tlaGNC"> 190 : X_test = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), test_t });</span></span>
<span id="L46"><span class="lineNum"> 46</span> <span class="tlaGNC"> 114 : y_test = dataset.index({ -1, test_t });</span></span>
<span id="L47"><span class="lineNum"> 47</span> <span class="tlaGNC"> 38 : dataset = X_train;</span></span>
<span id="L48"><span class="lineNum"> 48</span> <span class="tlaGNC"> 38 : m = X_train.size(1);</span></span>
<span id="L49"><span class="lineNum"> 49</span> <span class="tlaGNC"> 38 : auto n_classes = states.at(className).size();</span></span>
<span id="L50"><span class="lineNum"> 50</span> : // Build dataset with train data</span>
<span id="L51"><span class="lineNum"> 51</span> <span class="tlaGNC"> 38 : buildDataset(y_train);</span></span>
<span id="L52"><span class="lineNum"> 52</span> <span class="tlaGNC"> 38 : metrics = Metrics(dataset, features, className, n_classes);</span></span>
<span id="L53"><span class="lineNum"> 53</span> <span class="tlaGNC"> 38 : } else {</span></span>
<span id="L54"><span class="lineNum"> 54</span> : // Use all data to train</span>
<span id="L55"><span class="lineNum"> 55</span> <span class="tlaGNC"> 32 : X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), &quot;...&quot; });</span></span>
<span id="L56"><span class="lineNum"> 56</span> <span class="tlaGNC"> 8 : y_train = y_;</span></span>
<span id="L57"><span class="lineNum"> 57</span> : }</span>
<span id="L58"><span class="lineNum"> 58</span> <span class="tlaGNC"> 450 : }</span></span>
<span id="L59"><span class="lineNum"> 59</span> <span class="tlaGNC"> 44 : void BoostAODE::setHyperparameters(const nlohmann::json&amp; hyperparameters_)</span></span>
<span id="L60"><span class="lineNum"> 60</span> : {</span>
<span id="L61"><span class="lineNum"> 61</span> <span class="tlaGNC"> 44 : auto hyperparameters = hyperparameters_;</span></span>
<span id="L62"><span class="lineNum"> 62</span> <span class="tlaGNC"> 44 : if (hyperparameters.contains(&quot;order&quot;)) {</span></span>
<span id="L63"><span class="lineNum"> 63</span> <span class="tlaGNC"> 50 : std::vector&lt;std::string&gt; algos = { Orders.ASC, Orders.DESC, Orders.RAND };</span></span>
<span id="L64"><span class="lineNum"> 64</span> <span class="tlaGNC"> 10 : order_algorithm = hyperparameters[&quot;order&quot;];</span></span>
<span id="L65"><span class="lineNum"> 65</span> <span class="tlaGNC"> 10 : if (std::find(algos.begin(), algos.end(), order_algorithm) == algos.end()) {</span></span>
<span id="L66"><span class="lineNum"> 66</span> <span class="tlaGNC"> 2 : throw std::invalid_argument(&quot;Invalid order algorithm, valid values [&quot; + Orders.ASC + &quot;, &quot; + Orders.DESC + &quot;, &quot; + Orders.RAND + &quot;]&quot;);</span></span>
<span id="L67"><span class="lineNum"> 67</span> : }</span>
<span id="L68"><span class="lineNum"> 68</span> <span class="tlaGNC"> 8 : hyperparameters.erase(&quot;order&quot;);</span></span>
<span id="L69"><span class="lineNum"> 69</span> <span class="tlaGNC"> 10 : }</span></span>
<span id="L70"><span class="lineNum"> 70</span> <span class="tlaGNC"> 42 : if (hyperparameters.contains(&quot;convergence&quot;)) {</span></span>
<span id="L71"><span class="lineNum"> 71</span> <span class="tlaGNC"> 18 : convergence = hyperparameters[&quot;convergence&quot;];</span></span>
<span id="L72"><span class="lineNum"> 72</span> <span class="tlaGNC"> 18 : hyperparameters.erase(&quot;convergence&quot;);</span></span>
<span id="L73"><span class="lineNum"> 73</span> : }</span>
<span id="L74"><span class="lineNum"> 74</span> <span class="tlaGNC"> 42 : if (hyperparameters.contains(&quot;convergence_best&quot;)) {</span></span>
<span id="L75"><span class="lineNum"> 75</span> <span class="tlaGNC"> 6 : convergence_best = hyperparameters[&quot;convergence_best&quot;];</span></span>
<span id="L76"><span class="lineNum"> 76</span> <span class="tlaGNC"> 6 : hyperparameters.erase(&quot;convergence_best&quot;);</span></span>
<span id="L77"><span class="lineNum"> 77</span> : }</span>
<span id="L78"><span class="lineNum"> 78</span> <span class="tlaGNC"> 42 : if (hyperparameters.contains(&quot;bisection&quot;)) {</span></span>
<span id="L79"><span class="lineNum"> 79</span> <span class="tlaGNC"> 16 : bisection = hyperparameters[&quot;bisection&quot;];</span></span>
<span id="L80"><span class="lineNum"> 80</span> <span class="tlaGNC"> 16 : hyperparameters.erase(&quot;bisection&quot;);</span></span>
<span id="L81"><span class="lineNum"> 81</span> : }</span>
<span id="L82"><span class="lineNum"> 82</span> <span class="tlaGNC"> 42 : if (hyperparameters.contains(&quot;threshold&quot;)) {</span></span>
<span id="L83"><span class="lineNum"> 83</span> <span class="tlaGNC"> 12 : threshold = hyperparameters[&quot;threshold&quot;];</span></span>
<span id="L84"><span class="lineNum"> 84</span> <span class="tlaGNC"> 12 : hyperparameters.erase(&quot;threshold&quot;);</span></span>
<span id="L85"><span class="lineNum"> 85</span> : }</span>
<span id="L86"><span class="lineNum"> 86</span> <span class="tlaGNC"> 42 : if (hyperparameters.contains(&quot;maxTolerance&quot;)) {</span></span>
<span id="L87"><span class="lineNum"> 87</span> <span class="tlaGNC"> 22 : maxTolerance = hyperparameters[&quot;maxTolerance&quot;];</span></span>
<span id="L88"><span class="lineNum"> 88</span> <span class="tlaGNC"> 22 : if (maxTolerance &lt; 1 || maxTolerance &gt; 4)</span></span>
<span id="L89"><span class="lineNum"> 89</span> <span class="tlaGNC"> 6 : throw std::invalid_argument(&quot;Invalid maxTolerance value, must be greater in [1, 4]&quot;);</span></span>
<span id="L90"><span class="lineNum"> 90</span> <span class="tlaGNC"> 16 : hyperparameters.erase(&quot;maxTolerance&quot;);</span></span>
<span id="L91"><span class="lineNum"> 91</span> : }</span>
<span id="L92"><span class="lineNum"> 92</span> <span class="tlaGNC"> 36 : if (hyperparameters.contains(&quot;predict_voting&quot;)) {</span></span>
<span id="L93"><span class="lineNum"> 93</span> <span class="tlaGNC"> 2 : predict_voting = hyperparameters[&quot;predict_voting&quot;];</span></span>
<span id="L94"><span class="lineNum"> 94</span> <span class="tlaGNC"> 2 : hyperparameters.erase(&quot;predict_voting&quot;);</span></span>
<span id="L95"><span class="lineNum"> 95</span> : }</span>
<span id="L96"><span class="lineNum"> 96</span> <span class="tlaGNC"> 36 : if (hyperparameters.contains(&quot;select_features&quot;)) {</span></span>
<span id="L97"><span class="lineNum"> 97</span> <span class="tlaGNC"> 18 : auto selectedAlgorithm = hyperparameters[&quot;select_features&quot;];</span></span>
<span id="L98"><span class="lineNum"> 98</span> <span class="tlaGNC"> 90 : std::vector&lt;std::string&gt; algos = { SelectFeatures.IWSS, SelectFeatures.CFS, SelectFeatures.FCBF };</span></span>
<span id="L99"><span class="lineNum"> 99</span> <span class="tlaGNC"> 18 : selectFeatures = true;</span></span>
<span id="L100"><span class="lineNum"> 100</span> <span class="tlaGNC"> 18 : select_features_algorithm = selectedAlgorithm;</span></span>
<span id="L101"><span class="lineNum"> 101</span> <span class="tlaGNC"> 18 : if (std::find(algos.begin(), algos.end(), selectedAlgorithm) == algos.end()) {</span></span>
<span id="L102"><span class="lineNum"> 102</span> <span class="tlaGNC"> 2 : throw std::invalid_argument(&quot;Invalid selectFeatures value, valid values [&quot; + SelectFeatures.IWSS + &quot;, &quot; + SelectFeatures.CFS + &quot;, &quot; + SelectFeatures.FCBF + &quot;]&quot;);</span></span>
<span id="L103"><span class="lineNum"> 103</span> : }</span>
<span id="L104"><span class="lineNum"> 104</span> <span class="tlaGNC"> 16 : hyperparameters.erase(&quot;select_features&quot;);</span></span>
<span id="L105"><span class="lineNum"> 105</span> <span class="tlaGNC"> 20 : }</span></span>
<span id="L106"><span class="lineNum"> 106</span> <span class="tlaGNC"> 34 : if (hyperparameters.contains(&quot;block_update&quot;)) {</span></span>
<span id="L107"><span class="lineNum"> 107</span> <span class="tlaGNC"> 4 : block_update = hyperparameters[&quot;block_update&quot;];</span></span>
<span id="L108"><span class="lineNum"> 108</span> <span class="tlaGNC"> 4 : hyperparameters.erase(&quot;block_update&quot;);</span></span>
<span id="L109"><span class="lineNum"> 109</span> : }</span>
<span id="L110"><span class="lineNum"> 110</span> <span class="tlaGNC"> 34 : Classifier::setHyperparameters(hyperparameters);</span></span>
<span id="L111"><span class="lineNum"> 111</span> <span class="tlaGNC"> 72 : }</span></span>
<span id="L112"><span class="lineNum"> 112</span> <span class="tlaGNC"> 272 : std::tuple&lt;torch::Tensor&amp;, double, bool&gt; update_weights(torch::Tensor&amp; ytrain, torch::Tensor&amp; ypred, torch::Tensor&amp; weights)</span></span>
<span id="L113"><span class="lineNum"> 113</span> : {</span>
<span id="L114"><span class="lineNum"> 114</span> <span class="tlaGNC"> 272 : bool terminate = false;</span></span>
<span id="L115"><span class="lineNum"> 115</span> <span class="tlaGNC"> 272 : double alpha_t = 0;</span></span>
<span id="L116"><span class="lineNum"> 116</span> <span class="tlaGNC"> 272 : auto mask_wrong = ypred != ytrain;</span></span>
<span id="L117"><span class="lineNum"> 117</span> <span class="tlaGNC"> 272 : auto mask_right = ypred == ytrain;</span></span>
<span id="L118"><span class="lineNum"> 118</span> <span class="tlaGNC"> 272 : auto masked_weights = weights * mask_wrong.to(weights.dtype());</span></span>
<span id="L119"><span class="lineNum"> 119</span> <span class="tlaGNC"> 272 : double epsilon_t = masked_weights.sum().item&lt;double&gt;();</span></span>
<span id="L120"><span class="lineNum"> 120</span> <span class="tlaGNC"> 272 : if (epsilon_t &gt; 0.5) {</span></span>
<span id="L121"><span class="lineNum"> 121</span> : // Inverse the weights policy (plot ln(wt))</span>
<span id="L122"><span class="lineNum"> 122</span> : // &quot;In each round of AdaBoost, there is a sanity check to ensure that the current base </span>
<span id="L123"><span class="lineNum"> 123</span> : // learner is better than random guess&quot; (Zhi-Hua Zhou, 2012)</span>
<span id="L124"><span class="lineNum"> 124</span> <span class="tlaGNC"> 8 : terminate = true;</span></span>
<span id="L125"><span class="lineNum"> 125</span> : } else {</span>
<span id="L126"><span class="lineNum"> 126</span> <span class="tlaGNC"> 264 : double wt = (1 - epsilon_t) / epsilon_t;</span></span>
<span id="L127"><span class="lineNum"> 127</span> <span class="tlaGNC"> 264 : alpha_t = epsilon_t == 0 ? 1 : 0.5 * log(wt);</span></span>
<span id="L128"><span class="lineNum"> 128</span> : // Step 3.2: Update weights for next classifier</span>
<span id="L129"><span class="lineNum"> 129</span> : // Step 3.2.1: Update weights of wrong samples</span>
<span id="L130"><span class="lineNum"> 130</span> <span class="tlaGNC"> 264 : weights += mask_wrong.to(weights.dtype()) * exp(alpha_t) * weights;</span></span>
<span id="L131"><span class="lineNum"> 131</span> : // Step 3.2.2: Update weights of right samples</span>
<span id="L132"><span class="lineNum"> 132</span> <span class="tlaGNC"> 264 : weights += mask_right.to(weights.dtype()) * exp(-alpha_t) * weights;</span></span>
<span id="L133"><span class="lineNum"> 133</span> : // Step 3.3: Normalise the weights</span>
<span id="L134"><span class="lineNum"> 134</span> <span class="tlaGNC"> 264 : double totalWeights = torch::sum(weights).item&lt;double&gt;();</span></span>
<span id="L135"><span class="lineNum"> 135</span> <span class="tlaGNC"> 264 : weights = weights / totalWeights;</span></span>
<span id="L136"><span class="lineNum"> 136</span> : }</span>
<span id="L137"><span class="lineNum"> 137</span> <span class="tlaGNC"> 544 : return { weights, alpha_t, terminate };</span></span>
<span id="L138"><span class="lineNum"> 138</span> <span class="tlaGNC"> 272 : }</span></span>
<span id="L139"><span class="lineNum"> 139</span> <span class="tlaGNC"> 14 : std::tuple&lt;torch::Tensor&amp;, double, bool&gt; BoostAODE::update_weights_block(int k, torch::Tensor&amp; ytrain, torch::Tensor&amp; weights)</span></span>
<span id="L140"><span class="lineNum"> 140</span> : {</span>
<span id="L141"><span class="lineNum"> 141</span> : /* Update Block algorithm</span>
<span id="L142"><span class="lineNum"> 142</span> : k = # of models in block</span>
<span id="L143"><span class="lineNum"> 143</span> : n_models = # of models in ensemble to make predictions</span>
<span id="L144"><span class="lineNum"> 144</span> : n_models_bak = # models saved</span>
<span id="L145"><span class="lineNum"> 145</span> : models = vector of models to make predictions</span>
<span id="L146"><span class="lineNum"> 146</span> : models_bak = models not used to make predictions</span>
<span id="L147"><span class="lineNum"> 147</span> : significances_bak = backup of significances vector</span>
<span id="L148"><span class="lineNum"> 148</span> : </span>
<span id="L149"><span class="lineNum"> 149</span> : Case list</span>
<span id="L150"><span class="lineNum"> 150</span> : A) k = 1, n_models = 1 =&gt; n = 0 , n_models = n + k</span>
<span id="L151"><span class="lineNum"> 151</span> : B) k = 1, n_models = n + 1 =&gt; n_models = n + k</span>
<span id="L152"><span class="lineNum"> 152</span> : C) k &gt; 1, n_models = k + 1 =&gt; n= 1, n_models = n + k</span>
<span id="L153"><span class="lineNum"> 153</span> : D) k &gt; 1, n_models = k =&gt; n = 0, n_models = n + k</span>
<span id="L154"><span class="lineNum"> 154</span> : E) k &gt; 1, n_models = k + n =&gt; n_models = n + k</span>
<span id="L155"><span class="lineNum"> 155</span> : </span>
<span id="L156"><span class="lineNum"> 156</span> : A, D) n=0, k &gt; 0, n_models == k</span>
<span id="L157"><span class="lineNum"> 157</span> : 1. n_models_bak &lt;- n_models</span>
<span id="L158"><span class="lineNum"> 158</span> : 2. significances_bak &lt;- significances</span>
<span id="L159"><span class="lineNum"> 159</span> : 3. significances = vector(k, 1)</span>
<span id="L160"><span class="lineNum"> 160</span> : 4. Dont move any classifiers out of models</span>
<span id="L161"><span class="lineNum"> 161</span> : 5. n_models &lt;- k</span>
<span id="L162"><span class="lineNum"> 162</span> : 6. Make prediction, compute alpha, update weights</span>
<span id="L163"><span class="lineNum"> 163</span> : 7. Dont restore any classifiers to models</span>
<span id="L164"><span class="lineNum"> 164</span> : 8. significances &lt;- significances_bak</span>
<span id="L165"><span class="lineNum"> 165</span> : 9. Update last k significances</span>
<span id="L166"><span class="lineNum"> 166</span> : 10. n_models &lt;- n_models_bak</span>
<span id="L167"><span class="lineNum"> 167</span> : </span>
<span id="L168"><span class="lineNum"> 168</span> : B, C, E) n &gt; 0, k &gt; 0, n_models == n + k</span>
<span id="L169"><span class="lineNum"> 169</span> : 1. n_models_bak &lt;- n_models</span>
<span id="L170"><span class="lineNum"> 170</span> : 2. significances_bak &lt;- significances</span>
<span id="L171"><span class="lineNum"> 171</span> : 3. significances = vector(k, 1)</span>
<span id="L172"><span class="lineNum"> 172</span> : 4. Move first n classifiers to models_bak</span>
<span id="L173"><span class="lineNum"> 173</span> : 5. n_models &lt;- k</span>
<span id="L174"><span class="lineNum"> 174</span> : 6. Make prediction, compute alpha, update weights</span>
<span id="L175"><span class="lineNum"> 175</span> : 7. Insert classifiers in models_bak to be the first n models</span>
<span id="L176"><span class="lineNum"> 176</span> : 8. significances &lt;- significances_bak</span>
<span id="L177"><span class="lineNum"> 177</span> : 9. Update last k significances</span>
<span id="L178"><span class="lineNum"> 178</span> : 10. n_models &lt;- n_models_bak</span>
<span id="L179"><span class="lineNum"> 179</span> : */</span>
<span id="L180"><span class="lineNum"> 180</span> : //</span>
<span id="L181"><span class="lineNum"> 181</span> : // Make predict with only the last k models</span>
<span id="L182"><span class="lineNum"> 182</span> : //</span>
<span id="L183"><span class="lineNum"> 183</span> <span class="tlaGNC"> 14 : std::unique_ptr&lt;Classifier&gt; model;</span></span>
<span id="L184"><span class="lineNum"> 184</span> <span class="tlaGNC"> 14 : std::vector&lt;std::unique_ptr&lt;Classifier&gt;&gt; models_bak;</span></span>
<span id="L185"><span class="lineNum"> 185</span> : // 1. n_models_bak &lt;- n_models 2. significances_bak &lt;- significances</span>
<span id="L186"><span class="lineNum"> 186</span> <span class="tlaGNC"> 14 : auto significance_bak = significanceModels;</span></span>
<span id="L187"><span class="lineNum"> 187</span> <span class="tlaGNC"> 14 : auto n_models_bak = n_models;</span></span>
<span id="L188"><span class="lineNum"> 188</span> : // 3. significances = vector(k, 1)</span>
<span id="L189"><span class="lineNum"> 189</span> <span class="tlaGNC"> 14 : significanceModels = std::vector&lt;double&gt;(k, 1.0);</span></span>
<span id="L190"><span class="lineNum"> 190</span> : // 4. Move first n classifiers to models_bak</span>
<span id="L191"><span class="lineNum"> 191</span> : // backup the first n_models - k models (if n_models == k, don't backup any)</span>
<span id="L192"><span class="lineNum"> 192</span> <span class="tlaGNC"> 74 : for (int i = 0; i &lt; n_models - k; ++i) {</span></span>
<span id="L193"><span class="lineNum"> 193</span> <span class="tlaGNC"> 60 : model = std::move(models[0]);</span></span>
<span id="L194"><span class="lineNum"> 194</span> <span class="tlaGNC"> 60 : models.erase(models.begin());</span></span>
<span id="L195"><span class="lineNum"> 195</span> <span class="tlaGNC"> 60 : models_bak.push_back(std::move(model));</span></span>
<span id="L196"><span class="lineNum"> 196</span> : }</span>
<span id="L197"><span class="lineNum"> 197</span> <span class="tlaGNC"> 14 : assert(models.size() == k);</span></span>
<span id="L198"><span class="lineNum"> 198</span> : // 5. n_models &lt;- k</span>
<span id="L199"><span class="lineNum"> 199</span> <span class="tlaGNC"> 14 : n_models = k;</span></span>
<span id="L200"><span class="lineNum"> 200</span> : // 6. Make prediction, compute alpha, update weights</span>
<span id="L201"><span class="lineNum"> 201</span> <span class="tlaGNC"> 14 : auto ypred = predict(X_train);</span></span>
<span id="L202"><span class="lineNum"> 202</span> : //</span>
<span id="L203"><span class="lineNum"> 203</span> : // Update weights</span>
<span id="L204"><span class="lineNum"> 204</span> : //</span>
<span id="L205"><span class="lineNum"> 205</span> : double alpha_t;</span>
<span id="L206"><span class="lineNum"> 206</span> : bool terminate;</span>
<span id="L207"><span class="lineNum"> 207</span> <span class="tlaGNC"> 14 : std::tie(weights, alpha_t, terminate) = update_weights(y_train, ypred, weights);</span></span>
<span id="L208"><span class="lineNum"> 208</span> : //</span>
<span id="L209"><span class="lineNum"> 209</span> : // Restore the models if needed</span>
<span id="L210"><span class="lineNum"> 210</span> : //</span>
<span id="L211"><span class="lineNum"> 211</span> : // 7. Insert classifiers in models_bak to be the first n models</span>
<span id="L212"><span class="lineNum"> 212</span> : // if n_models_bak == k, don't restore any, because none of them were moved</span>
<span id="L213"><span class="lineNum"> 213</span> <span class="tlaGNC"> 14 : if (k != n_models_bak) {</span></span>
<span id="L214"><span class="lineNum"> 214</span> : // Insert in the same order as they were extracted</span>
<span id="L215"><span class="lineNum"> 215</span> <span class="tlaGNC"> 12 : int bak_size = models_bak.size();</span></span>
<span id="L216"><span class="lineNum"> 216</span> <span class="tlaGNC"> 72 : for (int i = 0; i &lt; bak_size; ++i) {</span></span>
<span id="L217"><span class="lineNum"> 217</span> <span class="tlaGNC"> 60 : model = std::move(models_bak[bak_size - 1 - i]);</span></span>
<span id="L218"><span class="lineNum"> 218</span> <span class="tlaGNC"> 60 : models_bak.erase(models_bak.end() - 1);</span></span>
<span id="L219"><span class="lineNum"> 219</span> <span class="tlaGNC"> 60 : models.insert(models.begin(), std::move(model));</span></span>
<span id="L220"><span class="lineNum"> 220</span> : }</span>
<span id="L221"><span class="lineNum"> 221</span> : }</span>
<span id="L222"><span class="lineNum"> 222</span> : // 8. significances &lt;- significances_bak</span>
<span id="L223"><span class="lineNum"> 223</span> <span class="tlaGNC"> 14 : significanceModels = significance_bak;</span></span>
<span id="L224"><span class="lineNum"> 224</span> : //</span>
<span id="L225"><span class="lineNum"> 225</span> : // Update the significance of the last k models</span>
<span id="L226"><span class="lineNum"> 226</span> : //</span>
<span id="L227"><span class="lineNum"> 227</span> : // 9. Update last k significances</span>
<span id="L228"><span class="lineNum"> 228</span> <span class="tlaGNC"> 52 : for (int i = 0; i &lt; k; ++i) {</span></span>
<span id="L229"><span class="lineNum"> 229</span> <span class="tlaGNC"> 38 : significanceModels[n_models_bak - k + i] = alpha_t;</span></span>
<span id="L230"><span class="lineNum"> 230</span> : }</span>
<span id="L231"><span class="lineNum"> 231</span> : // 10. n_models &lt;- n_models_bak</span>
<span id="L232"><span class="lineNum"> 232</span> <span class="tlaGNC"> 14 : n_models = n_models_bak;</span></span>
<span id="L233"><span class="lineNum"> 233</span> <span class="tlaGNC"> 28 : return { weights, alpha_t, terminate };</span></span>
<span id="L234"><span class="lineNum"> 234</span> <span class="tlaGNC"> 14 : }</span></span>
<span id="L235"><span class="lineNum"> 235</span> <span class="tlaGNC"> 16 : std::vector&lt;int&gt; BoostAODE::initializeModels()</span></span>
<span id="L236"><span class="lineNum"> 236</span> : {</span>
<span id="L237"><span class="lineNum"> 237</span> <span class="tlaGNC"> 16 : std::vector&lt;int&gt; featuresUsed;</span></span>
<span id="L238"><span class="lineNum"> 238</span> <span class="tlaGNC"> 16 : torch::Tensor weights_ = torch::full({ m }, 1.0 / m, torch::kFloat64);</span></span>
<span id="L239"><span class="lineNum"> 239</span> <span class="tlaGNC"> 16 : int maxFeatures = 0;</span></span>
<span id="L240"><span class="lineNum"> 240</span> <span class="tlaGNC"> 16 : if (select_features_algorithm == SelectFeatures.CFS) {</span></span>
<span id="L241"><span class="lineNum"> 241</span> <span class="tlaGNC"> 4 : featureSelector = new CFS(dataset, features, className, maxFeatures, states.at(className).size(), weights_);</span></span>
<span id="L242"><span class="lineNum"> 242</span> <span class="tlaGNC"> 12 : } else if (select_features_algorithm == SelectFeatures.IWSS) {</span></span>
<span id="L243"><span class="lineNum"> 243</span> <span class="tlaGNC"> 6 : if (threshold &lt; 0 || threshold &gt;0.5) {</span></span>
<span id="L244"><span class="lineNum"> 244</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;Invalid threshold value for &quot; + SelectFeatures.IWSS + &quot; [0, 0.5]&quot;);</span></span>
<span id="L245"><span class="lineNum"> 245</span> : }</span>
<span id="L246"><span class="lineNum"> 246</span> <span class="tlaGNC"> 2 : featureSelector = new IWSS(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);</span></span>
<span id="L247"><span class="lineNum"> 247</span> <span class="tlaGNC"> 6 : } else if (select_features_algorithm == SelectFeatures.FCBF) {</span></span>
<span id="L248"><span class="lineNum"> 248</span> <span class="tlaGNC"> 6 : if (threshold &lt; 1e-7 || threshold &gt; 1) {</span></span>
<span id="L249"><span class="lineNum"> 249</span> <span class="tlaGNC"> 4 : throw std::invalid_argument(&quot;Invalid threshold value for &quot; + SelectFeatures.FCBF + &quot; [1e-7, 1]&quot;);</span></span>
<span id="L250"><span class="lineNum"> 250</span> : }</span>
<span id="L251"><span class="lineNum"> 251</span> <span class="tlaGNC"> 2 : featureSelector = new FCBF(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);</span></span>
<span id="L252"><span class="lineNum"> 252</span> : }</span>
<span id="L253"><span class="lineNum"> 253</span> <span class="tlaGNC"> 8 : featureSelector-&gt;fit();</span></span>
<span id="L254"><span class="lineNum"> 254</span> <span class="tlaGNC"> 8 : auto cfsFeatures = featureSelector-&gt;getFeatures();</span></span>
<span id="L255"><span class="lineNum"> 255</span> <span class="tlaGNC"> 8 : auto scores = featureSelector-&gt;getScores();</span></span>
<span id="L256"><span class="lineNum"> 256</span> <span class="tlaGNC"> 50 : for (const int&amp; feature : cfsFeatures) {</span></span>
<span id="L257"><span class="lineNum"> 257</span> <span class="tlaGNC"> 42 : featuresUsed.push_back(feature);</span></span>
<span id="L258"><span class="lineNum"> 258</span> <span class="tlaGNC"> 42 : std::unique_ptr&lt;Classifier&gt; model = std::make_unique&lt;SPODE&gt;(feature);</span></span>
<span id="L259"><span class="lineNum"> 259</span> <span class="tlaGNC"> 42 : model-&gt;fit(dataset, features, className, states, weights_);</span></span>
<span id="L260"><span class="lineNum"> 260</span> <span class="tlaGNC"> 42 : models.push_back(std::move(model));</span></span>
<span id="L261"><span class="lineNum"> 261</span> <span class="tlaGNC"> 42 : significanceModels.push_back(1.0); // They will be updated later in trainModel</span></span>
<span id="L262"><span class="lineNum"> 262</span> <span class="tlaGNC"> 42 : n_models++;</span></span>
<span id="L263"><span class="lineNum"> 263</span> <span class="tlaGNC"> 42 : }</span></span>
<span id="L264"><span class="lineNum"> 264</span> <span class="tlaGNC"> 8 : notes.push_back(&quot;Used features in initialization: &quot; + std::to_string(featuresUsed.size()) + &quot; of &quot; + std::to_string(features.size()) + &quot; with &quot; + select_features_algorithm);</span></span>
<span id="L265"><span class="lineNum"> 265</span> <span class="tlaGNC"> 8 : delete featureSelector;</span></span>
<span id="L266"><span class="lineNum"> 266</span> <span class="tlaGNC"> 16 : return featuresUsed;</span></span>
<span id="L267"><span class="lineNum"> 267</span> <span class="tlaGNC"> 24 : }</span></span>
<span id="L268"><span class="lineNum"> 268</span> <span class="tlaGNC"> 46 : void BoostAODE::trainModel(const torch::Tensor&amp; weights)</span></span>
<span id="L269"><span class="lineNum"> 269</span> : {</span>
<span id="L270"><span class="lineNum"> 270</span> : //</span>
<span id="L271"><span class="lineNum"> 271</span> : // Logging setup</span>
<span id="L272"><span class="lineNum"> 272</span> : //</span>
<span id="L273"><span class="lineNum"> 273</span> <span class="tlaGNC"> 46 : loguru::set_thread_name(&quot;BoostAODE&quot;);</span></span>
<span id="L274"><span class="lineNum"> 274</span> <span class="tlaGNC"> 46 : loguru::g_stderr_verbosity = loguru::Verbosity_OFF;</span></span>
<span id="L275"><span class="lineNum"> 275</span> <span class="tlaGNC"> 46 : loguru::add_file(&quot;boostAODE.log&quot;, loguru::Truncate, loguru::Verbosity_MAX);</span></span>
<span id="L276"><span class="lineNum"> 276</span> : </span>
<span id="L277"><span class="lineNum"> 277</span> : // Algorithm based on the adaboost algorithm for classification</span>
<span id="L278"><span class="lineNum"> 278</span> : // as explained in Ensemble methods (Zhi-Hua Zhou, 2012)</span>
<span id="L279"><span class="lineNum"> 279</span> <span class="tlaGNC"> 46 : fitted = true;</span></span>
<span id="L280"><span class="lineNum"> 280</span> <span class="tlaGNC"> 46 : double alpha_t = 0;</span></span>
<span id="L281"><span class="lineNum"> 281</span> <span class="tlaGNC"> 46 : torch::Tensor weights_ = torch::full({ m }, 1.0 / m, torch::kFloat64);</span></span>
<span id="L282"><span class="lineNum"> 282</span> <span class="tlaGNC"> 46 : bool finished = false;</span></span>
<span id="L283"><span class="lineNum"> 283</span> <span class="tlaGNC"> 46 : std::vector&lt;int&gt; featuresUsed;</span></span>
<span id="L284"><span class="lineNum"> 284</span> <span class="tlaGNC"> 46 : if (selectFeatures) {</span></span>
<span id="L285"><span class="lineNum"> 285</span> <span class="tlaGNC"> 16 : featuresUsed = initializeModels();</span></span>
<span id="L286"><span class="lineNum"> 286</span> <span class="tlaGNC"> 8 : auto ypred = predict(X_train);</span></span>
<span id="L287"><span class="lineNum"> 287</span> <span class="tlaGNC"> 8 : std::tie(weights_, alpha_t, finished) = update_weights(y_train, ypred, weights_);</span></span>
<span id="L288"><span class="lineNum"> 288</span> : // Update significance of the models</span>
<span id="L289"><span class="lineNum"> 289</span> <span class="tlaGNC"> 50 : for (int i = 0; i &lt; n_models; ++i) {</span></span>
<span id="L290"><span class="lineNum"> 290</span> <span class="tlaGNC"> 42 : significanceModels[i] = alpha_t;</span></span>
<span id="L291"><span class="lineNum"> 291</span> : }</span>
<span id="L292"><span class="lineNum"> 292</span> <span class="tlaGNC"> 8 : if (finished) {</span></span>
<span id="L293"><span class="lineNum"> 293</span> <span class="tlaUNC tlaBgUNC"> 0 : return;</span></span>
<span id="L294"><span class="lineNum"> 294</span> : }</span>
<span id="L295"><span class="lineNum"> 295</span> <span class="tlaGNC tlaBgGNC"> 8 : }</span></span>
<span id="L296"><span class="lineNum"> 296</span> <span class="tlaGNC"> 38 : int numItemsPack = 0; // The counter of the models inserted in the current pack</span></span>
<span id="L297"><span class="lineNum"> 297</span> : // Variables to control the accuracy finish condition</span>
<span id="L298"><span class="lineNum"> 298</span> <span class="tlaGNC"> 38 : double priorAccuracy = 0.0;</span></span>
<span id="L299"><span class="lineNum"> 299</span> <span class="tlaGNC"> 38 : double improvement = 1.0;</span></span>
<span id="L300"><span class="lineNum"> 300</span> <span class="tlaGNC"> 38 : double convergence_threshold = 1e-4;</span></span>
<span id="L301"><span class="lineNum"> 301</span> <span class="tlaGNC"> 38 : int tolerance = 0; // number of times the accuracy is lower than the convergence_threshold</span></span>
<span id="L302"><span class="lineNum"> 302</span> : // Step 0: Set the finish condition</span>
<span id="L303"><span class="lineNum"> 303</span> : // epsilon sub t &gt; 0.5 =&gt; inverse the weights policy</span>
<span id="L304"><span class="lineNum"> 304</span> : // validation error is not decreasing</span>
<span id="L305"><span class="lineNum"> 305</span> : // run out of features</span>
<span id="L306"><span class="lineNum"> 306</span> <span class="tlaGNC"> 38 : bool ascending = order_algorithm == Orders.ASC;</span></span>
<span id="L307"><span class="lineNum"> 307</span> <span class="tlaGNC"> 38 : std::mt19937 g{ 173 };</span></span>
<span id="L308"><span class="lineNum"> 308</span> <span class="tlaGNC"> 252 : while (!finished) {</span></span>
<span id="L309"><span class="lineNum"> 309</span> : // Step 1: Build ranking with mutual information</span>
<span id="L310"><span class="lineNum"> 310</span> <span class="tlaGNC"> 214 : auto featureSelection = metrics.SelectKBestWeighted(weights_, ascending, n); // Get all the features sorted</span></span>
<span id="L311"><span class="lineNum"> 311</span> <span class="tlaGNC"> 214 : if (order_algorithm == Orders.RAND) {</span></span>
<span id="L312"><span class="lineNum"> 312</span> <span class="tlaGNC"> 18 : std::shuffle(featureSelection.begin(), featureSelection.end(), g);</span></span>
<span id="L313"><span class="lineNum"> 313</span> : }</span>
<span id="L314"><span class="lineNum"> 314</span> : // Remove used features</span>
<span id="L315"><span class="lineNum"> 315</span> <span class="tlaGNC"> 428 : featureSelection.erase(remove_if(begin(featureSelection), end(featureSelection), [&amp;](auto x)</span></span>
<span id="L316"><span class="lineNum"> 316</span> <span class="tlaGNC"> 19400 : { return std::find(begin(featuresUsed), end(featuresUsed), x) != end(featuresUsed);}),</span></span>
<span id="L317"><span class="lineNum"> 317</span> <span class="tlaGNC"> 214 : end(featureSelection)</span></span>
<span id="L318"><span class="lineNum"> 318</span> : );</span>
<span id="L319"><span class="lineNum"> 319</span> <span class="tlaGNC"> 214 : int k = bisection ? pow(2, tolerance) : 1;</span></span>
<span id="L320"><span class="lineNum"> 320</span> <span class="tlaGNC"> 214 : int counter = 0; // The model counter of the current pack</span></span>
<span id="L321"><span class="lineNum"> 321</span> <span class="tlaGNC"> 214 : VLOG_SCOPE_F(1, &quot;counter=%d k=%d featureSelection.size: %zu&quot;, counter, k, featureSelection.size());</span></span>
<span id="L322"><span class="lineNum"> 322</span> <span class="tlaGNC"> 502 : while (counter++ &lt; k &amp;&amp; featureSelection.size() &gt; 0) {</span></span>
<span id="L323"><span class="lineNum"> 323</span> <span class="tlaGNC"> 288 : auto feature = featureSelection[0];</span></span>
<span id="L324"><span class="lineNum"> 324</span> <span class="tlaGNC"> 288 : featureSelection.erase(featureSelection.begin());</span></span>
<span id="L325"><span class="lineNum"> 325</span> <span class="tlaGNC"> 288 : std::unique_ptr&lt;Classifier&gt; model;</span></span>
<span id="L326"><span class="lineNum"> 326</span> <span class="tlaGNC"> 288 : model = std::make_unique&lt;SPODE&gt;(feature);</span></span>
<span id="L327"><span class="lineNum"> 327</span> <span class="tlaGNC"> 288 : model-&gt;fit(dataset, features, className, states, weights_);</span></span>
<span id="L328"><span class="lineNum"> 328</span> <span class="tlaGNC"> 288 : alpha_t = 0.0;</span></span>
<span id="L329"><span class="lineNum"> 329</span> <span class="tlaGNC"> 288 : if (!block_update) {</span></span>
<span id="L330"><span class="lineNum"> 330</span> <span class="tlaGNC"> 250 : auto ypred = model-&gt;predict(X_train);</span></span>
<span id="L331"><span class="lineNum"> 331</span> : // Step 3.1: Compute the classifier amout of say</span>
<span id="L332"><span class="lineNum"> 332</span> <span class="tlaGNC"> 250 : std::tie(weights_, alpha_t, finished) = update_weights(y_train, ypred, weights_);</span></span>
<span id="L333"><span class="lineNum"> 333</span> <span class="tlaGNC"> 250 : }</span></span>
<span id="L334"><span class="lineNum"> 334</span> : // Step 3.4: Store classifier and its accuracy to weigh its future vote</span>
<span id="L335"><span class="lineNum"> 335</span> <span class="tlaGNC"> 288 : numItemsPack++;</span></span>
<span id="L336"><span class="lineNum"> 336</span> <span class="tlaGNC"> 288 : featuresUsed.push_back(feature);</span></span>
<span id="L337"><span class="lineNum"> 337</span> <span class="tlaGNC"> 288 : models.push_back(std::move(model));</span></span>
<span id="L338"><span class="lineNum"> 338</span> <span class="tlaGNC"> 288 : significanceModels.push_back(alpha_t);</span></span>
<span id="L339"><span class="lineNum"> 339</span> <span class="tlaGNC"> 288 : n_models++;</span></span>
<span id="L340"><span class="lineNum"> 340</span> <span class="tlaGNC"> 288 : VLOG_SCOPE_F(2, &quot;numItemsPack: %d n_models: %d featuresUsed: %zu&quot;, numItemsPack, n_models, featuresUsed.size());</span></span>
<span id="L341"><span class="lineNum"> 341</span> <span class="tlaGNC"> 288 : }</span></span>
<span id="L342"><span class="lineNum"> 342</span> <span class="tlaGNC"> 214 : if (block_update) {</span></span>
<span id="L343"><span class="lineNum"> 343</span> <span class="tlaGNC"> 14 : std::tie(weights_, alpha_t, finished) = update_weights_block(k, y_train, weights_);</span></span>
<span id="L344"><span class="lineNum"> 344</span> : }</span>
<span id="L345"><span class="lineNum"> 345</span> <span class="tlaGNC"> 214 : if (convergence &amp;&amp; !finished) {</span></span>
<span id="L346"><span class="lineNum"> 346</span> <span class="tlaGNC"> 148 : auto y_val_predict = predict(X_test);</span></span>
<span id="L347"><span class="lineNum"> 347</span> <span class="tlaGNC"> 148 : double accuracy = (y_val_predict == y_test).sum().item&lt;double&gt;() / (double)y_test.size(0);</span></span>
<span id="L348"><span class="lineNum"> 348</span> <span class="tlaGNC"> 148 : if (priorAccuracy == 0) {</span></span>
<span id="L349"><span class="lineNum"> 349</span> <span class="tlaGNC"> 30 : priorAccuracy = accuracy;</span></span>
<span id="L350"><span class="lineNum"> 350</span> : } else {</span>
<span id="L351"><span class="lineNum"> 351</span> <span class="tlaGNC"> 118 : improvement = accuracy - priorAccuracy;</span></span>
<span id="L352"><span class="lineNum"> 352</span> : }</span>
<span id="L353"><span class="lineNum"> 353</span> <span class="tlaGNC"> 148 : if (improvement &lt; convergence_threshold) {</span></span>
<span id="L354"><span class="lineNum"> 354</span> <span class="tlaGNC"> 88 : VLOG_SCOPE_F(3, &quot; (improvement&lt;threshold) tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f&quot;, tolerance, numItemsPack, improvement, priorAccuracy, accuracy);</span></span>
<span id="L355"><span class="lineNum"> 355</span> <span class="tlaGNC"> 88 : tolerance++;</span></span>
<span id="L356"><span class="lineNum"> 356</span> <span class="tlaGNC"> 88 : } else {</span></span>
<span id="L357"><span class="lineNum"> 357</span> <span class="tlaGNC"> 60 : VLOG_SCOPE_F(3, &quot;* (improvement&gt;=threshold) Reset. tolerance: %d numItemsPack: %d improvement: %f prior: %f current: %f&quot;, tolerance, numItemsPack, improvement, priorAccuracy, accuracy);</span></span>
<span id="L358"><span class="lineNum"> 358</span> <span class="tlaGNC"> 60 : tolerance = 0; // Reset the counter if the model performs better</span></span>
<span id="L359"><span class="lineNum"> 359</span> <span class="tlaGNC"> 60 : numItemsPack = 0;</span></span>
<span id="L360"><span class="lineNum"> 360</span> <span class="tlaGNC"> 60 : }</span></span>
<span id="L361"><span class="lineNum"> 361</span> <span class="tlaGNC"> 148 : if (convergence_best) {</span></span>
<span id="L362"><span class="lineNum"> 362</span> : // Keep the best accuracy until now as the prior accuracy</span>
<span id="L363"><span class="lineNum"> 363</span> <span class="tlaGNC"> 16 : priorAccuracy = std::max(accuracy, priorAccuracy);</span></span>
<span id="L364"><span class="lineNum"> 364</span> : } else {</span>
<span id="L365"><span class="lineNum"> 365</span> : // Keep the last accuray obtained as the prior accuracy</span>
<span id="L366"><span class="lineNum"> 366</span> <span class="tlaGNC"> 132 : priorAccuracy = accuracy;</span></span>
<span id="L367"><span class="lineNum"> 367</span> : }</span>
<span id="L368"><span class="lineNum"> 368</span> <span class="tlaGNC"> 148 : }</span></span>
<span id="L369"><span class="lineNum"> 369</span> <span class="tlaGNC"> 214 : VLOG_SCOPE_F(1, &quot;tolerance: %d featuresUsed.size: %zu features.size: %zu&quot;, tolerance, featuresUsed.size(), features.size());</span></span>
<span id="L370"><span class="lineNum"> 370</span> <span class="tlaGNC"> 214 : finished = finished || tolerance &gt; maxTolerance || featuresUsed.size() == features.size();</span></span>
<span id="L371"><span class="lineNum"> 371</span> <span class="tlaGNC"> 214 : }</span></span>
<span id="L372"><span class="lineNum"> 372</span> <span class="tlaGNC"> 38 : if (tolerance &gt; maxTolerance) {</span></span>
<span id="L373"><span class="lineNum"> 373</span> <span class="tlaGNC"> 4 : if (numItemsPack &lt; n_models) {</span></span>
<span id="L374"><span class="lineNum"> 374</span> <span class="tlaGNC"> 4 : notes.push_back(&quot;Convergence threshold reached &amp; &quot; + std::to_string(numItemsPack) + &quot; models eliminated&quot;);</span></span>
<span id="L375"><span class="lineNum"> 375</span> <span class="tlaGNC"> 4 : VLOG_SCOPE_F(4, &quot;Convergence threshold reached &amp; %d models eliminated of %d&quot;, numItemsPack, n_models);</span></span>
<span id="L376"><span class="lineNum"> 376</span> <span class="tlaGNC"> 52 : for (int i = 0; i &lt; numItemsPack; ++i) {</span></span>
<span id="L377"><span class="lineNum"> 377</span> <span class="tlaGNC"> 48 : significanceModels.pop_back();</span></span>
<span id="L378"><span class="lineNum"> 378</span> <span class="tlaGNC"> 48 : models.pop_back();</span></span>
<span id="L379"><span class="lineNum"> 379</span> <span class="tlaGNC"> 48 : n_models--;</span></span>
<span id="L380"><span class="lineNum"> 380</span> : }</span>
<span id="L381"><span class="lineNum"> 381</span> <span class="tlaGNC"> 4 : } else {</span></span>
<span id="L382"><span class="lineNum"> 382</span> <span class="tlaUNC tlaBgUNC"> 0 : notes.push_back(&quot;Convergence threshold reached &amp; 0 models eliminated&quot;);</span></span>
<span id="L383"><span class="lineNum"> 383</span> <span class="tlaUNC"> 0 : VLOG_SCOPE_F(4, &quot;Convergence threshold reached &amp; 0 models eliminated n_models=%d numItemsPack=%d&quot;, n_models, numItemsPack);</span></span>
<span id="L384"><span class="lineNum"> 384</span> <span class="tlaUNC"> 0 : }</span></span>
<span id="L385"><span class="lineNum"> 385</span> : }</span>
<span id="L386"><span class="lineNum"> 386</span> <span class="tlaGNC tlaBgGNC"> 38 : if (featuresUsed.size() != features.size()) {</span></span>
<span id="L387"><span class="lineNum"> 387</span> <span class="tlaGNC"> 2 : notes.push_back(&quot;Used features in train: &quot; + std::to_string(featuresUsed.size()) + &quot; of &quot; + std::to_string(features.size()));</span></span>
<span id="L388"><span class="lineNum"> 388</span> <span class="tlaGNC"> 2 : status = WARNING;</span></span>
<span id="L389"><span class="lineNum"> 389</span> : }</span>
<span id="L390"><span class="lineNum"> 390</span> <span class="tlaGNC"> 38 : notes.push_back(&quot;Number of models: &quot; + std::to_string(n_models));</span></span>
<span id="L391"><span class="lineNum"> 391</span> <span class="tlaGNC"> 54 : }</span></span>
<span id="L392"><span class="lineNum"> 392</span> <span class="tlaGNC"> 2 : std::vector&lt;std::string&gt; BoostAODE::graph(const std::string&amp; title) const</span></span>
<span id="L393"><span class="lineNum"> 393</span> : {</span>
<span id="L394"><span class="lineNum"> 394</span> <span class="tlaGNC"> 2 : return Ensemble::graph(title);</span></span>
<span id="L395"><span class="lineNum"> 395</span> : }</span>
<span id="L396"><span class="lineNum"> 396</span> : }</span>
</pre>
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<td width="5%" class="headerCovTableHead">Coverage</td>
<td width="5%" class="headerCovTableHead" title="Covered + Uncovered code">Total</td>
<td width="5%" class="headerCovTableHead" title="Exercised code only">Hit</td>
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<td class="headerItem">Test:</td>
<td class="headerValue">coverage.info</td>
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<td class="headerItem">Lines:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">1</td>
<td class="headerCovTableEntry">1</td>
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<td class="headerItem">Test Date:</td>
<td class="headerValue">2024-04-30 13:17:26</td>
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<td class="headerItem">Functions:</td>
<td class="headerCovTableEntryHi">100.0&nbsp;%</td>
<td class="headerCovTableEntry">2</td>
<td class="headerCovTableEntry">2</td>
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<td class="tableHead">Function Name <span title="Click to sort table by function name" class="tableHeadSort"><a href="BoostAODE.h.func.html"><img src="../../../updown.png" width=10 height=14 alt="Sort by function name" title="Click to sort table by function name" border=0></a></span></td>
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<td class="coverFn"><a href="BoostAODE.h.gcov.html#L25">_ZN8bayesnet9BoostAODED0Ev</a></td>
<td class="coverFnHi">44</td>
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<td class="coverFnAlias"><a href="BoostAODE.h.gcov.html#L25">_ZN8bayesnet9BoostAODED0Ev</a></td>
<td class="coverFnAliasHi">4</td>
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<td class="coverFnAlias"><a href="BoostAODE.h.gcov.html#L25">_ZN8bayesnet9BoostAODED2Ev</a></td>
<td class="coverFnAliasHi">40</td>
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