Include mpi in CMakeLists
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@ -25,12 +25,18 @@ set(CMAKE_CXX_EXTENSIONS OFF)
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set(CMAKE_EXPORT_COMPILE_COMMANDS ON)
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set(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} ${TORCH_CXX_FLAGS}")
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SET(CMAKE_CXX_FLAGS "${CMAKE_CXX_FLAGS} -pthread")
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# Options
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# -------
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option(ENABLE_CLANG_TIDY "Enable to add clang tidy." OFF)
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option(ENABLE_TESTING "Unit testing build" OFF)
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option(CODE_COVERAGE "Collect coverage from test library" OFF)
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option(MPI_ENABLED "Enable MPI options" ON)
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if (MPI_ENABLED)
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find_package(MPI REQUIRED)
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message("MPI_CXX_LIBRARIES=${MPI_CXX_LIBRARIES}")
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message("MPI_CXX_INCLUDE_DIRS=${MPI_CXX_INCLUDE_DIRS}")
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endif (MPI_ENABLED)
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# Boost Library
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set(Boost_USE_STATIC_LIBS OFF)
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10
README.md
10
README.md
@ -8,6 +8,16 @@ Bayesian Network Classifier with libtorch from scratch
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Before compiling BayesNet.
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### MPI
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In Linux just install openmpi & openmpi-devel packages.
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In Mac OS X, install mpich with brew and if cmake doesn't find it, edit mpicxx wrapper to remove the ",-commons,use_dylibs" from final_ldflags
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```bash
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vi /opt/homebrew/bin/mpicx
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```
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### boost library
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[Getting Started](<https://www.boost.org/doc/libs/1_83_0/more/getting_started/index.html>)
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@ -141,18 +141,18 @@ void list_results(json& results, std::string& model)
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void initialize_mpi(struct platform::ConfigMPI& config)
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{
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int provided;
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// int provided;
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// MPI_Init_thread(nullptr, nullptr, MPI_THREAD_MULTIPLE, &provided);
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// if (provided != MPI_THREAD_MULTIPLE) {
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// std::cerr << "MPI_Init_thread returned " << provided << " instead of " << MPI_THREAD_MULTIPLE << std::endl;
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// exit(1);
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// }
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MPI_Init(nullptr, nullptr);
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int rank, size;
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MPI_Comm_rank(MPI_COMM_WORLD, &rank);
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MPI_Comm_size(MPI_COMM_WORLD, &size);
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config.mpi_rank = rank;
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config.mpi_size = size;
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// MPI_Init(nullptr, nullptr);
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// int rank, size;
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// MPI_Comm_rank(MPI_COMM_WORLD, &rank);
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// MPI_Comm_size(MPI_COMM_WORLD, &size);
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// config.mpi_rank = rank;
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// config.mpi_size = size;
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}
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@ -213,8 +213,11 @@ int main(int argc, char** argv)
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} else {
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if (compute) {
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if (program.get<bool>("mpi")) {
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initialize_mpi(mpi_config);
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grid_search.setMPIConfig(mpi_config);
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MPI_Init(nullptr, nullptr);
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MPI_Comm_rank(MPI_COMM_WORLD, &config.rank);
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MPI_Comm_size(MPI_COMM_WORLD, &config.size);
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grid_search.go_mpi();
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MPI_Finzalize();
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} else {
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grid_search.go();
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std::cout << "Process took " << timer.getDurationString() << std::endl;
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