First functional BoostA2DE with its 1st test
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@ -16,27 +16,16 @@
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TEST_CASE("Build basic model", "[BoostA2DE]")
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{
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auto raw = RawDatasets("diabetes", true);
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bayesnet::Metrics metrics(raw.dataset, raw.features, raw.className, raw.classNumStates);
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auto expected = std::map<std::pair<int, int>, double>{
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{ { 0, 1 }, 0.0 },
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{ { 0, 2 }, 0.287696 },
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{ { 0, 3 }, 0.403749 },
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{ { 1, 2 }, 1.17112 },
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{ { 1, 3 }, 1.31852 },
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{ { 2, 3 }, 0.210068 },
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};
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for (int i = 0; i < raw.features.size() - 1; ++i) {
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for (int j = i + 1; j < raw.features.size(); ++j) {
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double result = metrics.conditionalMutualInformation(raw.dataset.index({ i, "..." }), raw.dataset.index({ j, "..." }), raw.yt, raw.weights);
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// REQUIRE(result == Catch::Approx(expected.at({ i, j })).epsilon(raw.epsilon));
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auto clf = bayesnet::SPnDE({ i, j });
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clf.fit(raw.Xv, raw.yv, raw.features, raw.className, raw.states);
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auto score = clf.score(raw.Xt, raw.yt);
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std::cout << " i " << i << " j " << j << " cmi "
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<< std::setw(8) << std::setprecision(6) << fixed << result
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<< " score = " << score << std::endl;
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}
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}
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auto clf = bayesnet::BoostA2DE();
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clf.fit(raw.Xv, raw.yv, raw.features, raw.className, raw.states);
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REQUIRE(clf.getNumberOfNodes() == 342);
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REQUIRE(clf.getNumberOfEdges() == 684);
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REQUIRE(clf.getNotes().size() == 3);
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REQUIRE(clf.getNotes()[0] == "Convergence threshold reached & 15 models eliminated");
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REQUIRE(clf.getNotes()[1] == "Used pairs not used in train: 20");
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REQUIRE(clf.getNotes()[2] == "Number of models: 38");
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auto score = clf.score(raw.Xv, raw.yv);
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REQUIRE(score == Catch::Approx(0.919271).epsilon(raw.epsilon));
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}
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// TEST_CASE("Feature_select IWSS", "[BoostAODE]")
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// {
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