BayesNet/bayesnet/ensembles/Boost.cc

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// ***************************************************************
// SPDX-FileCopyrightText: Copyright 2024 Ricardo Montañana Gómez
// SPDX-FileType: SOURCE
// SPDX-License-Identifier: MIT
// ***************************************************************
#include <folding.hpp>
#include "bayesnet/feature_selection/CFS.h"
#include "bayesnet/feature_selection/FCBF.h"
#include "bayesnet/feature_selection/IWSS.h"
#include "Boost.h"
namespace bayesnet {
Boost::Boost(bool predict_voting) : Ensemble(predict_voting)
{
validHyperparameters = { "order", "convergence", "convergence_best", "bisection", "threshold", "maxTolerance",
"predict_voting", "select_features", "block_update" };
}
void Boost::setHyperparameters(const nlohmann::json& hyperparameters_)
{
auto hyperparameters = hyperparameters_;
if (hyperparameters.contains("order")) {
std::vector<std::string> algos = { Orders.ASC, Orders.DESC, Orders.RAND };
order_algorithm = hyperparameters["order"];
if (std::find(algos.begin(), algos.end(), order_algorithm) == algos.end()) {
throw std::invalid_argument("Invalid order algorithm, valid values [" + Orders.ASC + ", " + Orders.DESC + ", " + Orders.RAND + "]");
}
hyperparameters.erase("order");
}
if (hyperparameters.contains("convergence")) {
convergence = hyperparameters["convergence"];
hyperparameters.erase("convergence");
}
if (hyperparameters.contains("convergence_best")) {
convergence_best = hyperparameters["convergence_best"];
hyperparameters.erase("convergence_best");
}
if (hyperparameters.contains("bisection")) {
bisection = hyperparameters["bisection"];
hyperparameters.erase("bisection");
}
if (hyperparameters.contains("threshold")) {
threshold = hyperparameters["threshold"];
hyperparameters.erase("threshold");
}
if (hyperparameters.contains("maxTolerance")) {
maxTolerance = hyperparameters["maxTolerance"];
if (maxTolerance < 1 || maxTolerance > 4)
throw std::invalid_argument("Invalid maxTolerance value, must be greater in [1, 4]");
hyperparameters.erase("maxTolerance");
}
if (hyperparameters.contains("predict_voting")) {
predict_voting = hyperparameters["predict_voting"];
hyperparameters.erase("predict_voting");
}
if (hyperparameters.contains("select_features")) {
auto selectedAlgorithm = hyperparameters["select_features"];
std::vector<std::string> algos = { SelectFeatures.IWSS, SelectFeatures.CFS, SelectFeatures.FCBF };
selectFeatures = true;
select_features_algorithm = selectedAlgorithm;
if (std::find(algos.begin(), algos.end(), selectedAlgorithm) == algos.end()) {
throw std::invalid_argument("Invalid selectFeatures value, valid values [" + SelectFeatures.IWSS + ", " + SelectFeatures.CFS + ", " + SelectFeatures.FCBF + "]");
}
hyperparameters.erase("select_features");
}
if (hyperparameters.contains("block_update")) {
block_update = hyperparameters["block_update"];
hyperparameters.erase("block_update");
}
Classifier::setHyperparameters(hyperparameters);
}
void Boost::buildModel(const torch::Tensor& weights)
{
// Models shall be built in trainModel
models.clear();
significanceModels.clear();
n_models = 0;
// Prepare the validation dataset
auto y_ = dataset.index({ -1, "..." });
if (convergence) {
// Prepare train & validation sets from train data
auto fold = folding::StratifiedKFold(5, y_, 271);
auto [train, test] = fold.getFold(0);
auto train_t = torch::tensor(train);
auto test_t = torch::tensor(test);
// Get train and validation sets
X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), train_t });
y_train = dataset.index({ -1, train_t });
X_test = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), test_t });
y_test = dataset.index({ -1, test_t });
dataset = X_train;
m = X_train.size(1);
auto n_classes = states.at(className).size();
// Build dataset with train data
buildDataset(y_train);
metrics = Metrics(dataset, features, className, n_classes);
} else {
// Use all data to train
X_train = dataset.index({ torch::indexing::Slice(0, dataset.size(0) - 1), "..." });
y_train = y_;
}
}
std::vector<int> Boost::featureSelection(torch::Tensor& weights_)
{
int maxFeatures = 0;
if (select_features_algorithm == SelectFeatures.CFS) {
featureSelector = new CFS(dataset, features, className, maxFeatures, states.at(className).size(), weights_);
} else if (select_features_algorithm == SelectFeatures.IWSS) {
if (threshold < 0 || threshold >0.5) {
throw std::invalid_argument("Invalid threshold value for " + SelectFeatures.IWSS + " [0, 0.5]");
}
featureSelector = new IWSS(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);
} else if (select_features_algorithm == SelectFeatures.FCBF) {
if (threshold < 1e-7 || threshold > 1) {
throw std::invalid_argument("Invalid threshold value for " + SelectFeatures.FCBF + " [1e-7, 1]");
}
featureSelector = new FCBF(dataset, features, className, maxFeatures, states.at(className).size(), weights_, threshold);
}
featureSelector->fit();
auto featuresUsed = featureSelector->getFeatures();
delete featureSelector;
return featuresUsed;
}
std::tuple<torch::Tensor&, double, bool> Boost::update_weights(torch::Tensor& ytrain, torch::Tensor& ypred, torch::Tensor& weights)
{
bool terminate = false;
double alpha_t = 0;
auto mask_wrong = ypred != ytrain;
auto mask_right = ypred == ytrain;
auto masked_weights = weights * mask_wrong.to(weights.dtype());
double epsilon_t = masked_weights.sum().item<double>();
if (epsilon_t > 0.5) {
// Inverse the weights policy (plot ln(wt))
// "In each round of AdaBoost, there is a sanity check to ensure that the current base
// learner is better than random guess" (Zhi-Hua Zhou, 2012)
terminate = true;
} else {
double wt = (1 - epsilon_t) / epsilon_t;
alpha_t = epsilon_t == 0 ? 1 : 0.5 * log(wt);
// Step 3.2: Update weights for next classifier
// Step 3.2.1: Update weights of wrong samples
weights += mask_wrong.to(weights.dtype()) * exp(alpha_t) * weights;
// Step 3.2.2: Update weights of right samples
weights += mask_right.to(weights.dtype()) * exp(-alpha_t) * weights;
// Step 3.3: Normalise the weights
double totalWeights = torch::sum(weights).item<double>();
weights = weights / totalWeights;
}
return { weights, alpha_t, terminate };
}
std::tuple<torch::Tensor&, double, bool> Boost::update_weights_block(int k, torch::Tensor& ytrain, torch::Tensor& weights)
{
/* Update Block algorithm
k = # of models in block
n_models = # of models in ensemble to make predictions
n_models_bak = # models saved
models = vector of models to make predictions
models_bak = models not used to make predictions
significances_bak = backup of significances vector
Case list
A) k = 1, n_models = 1 => n = 0 , n_models = n + k
B) k = 1, n_models = n + 1 => n_models = n + k
C) k > 1, n_models = k + 1 => n= 1, n_models = n + k
D) k > 1, n_models = k => n = 0, n_models = n + k
E) k > 1, n_models = k + n => n_models = n + k
A, D) n=0, k > 0, n_models == k
1. n_models_bak <- n_models
2. significances_bak <- significances
3. significances = vector(k, 1)
4. Dont move any classifiers out of models
5. n_models <- k
6. Make prediction, compute alpha, update weights
7. Dont restore any classifiers to models
8. significances <- significances_bak
9. Update last k significances
10. n_models <- n_models_bak
B, C, E) n > 0, k > 0, n_models == n + k
1. n_models_bak <- n_models
2. significances_bak <- significances
3. significances = vector(k, 1)
4. Move first n classifiers to models_bak
5. n_models <- k
6. Make prediction, compute alpha, update weights
7. Insert classifiers in models_bak to be the first n models
8. significances <- significances_bak
9. Update last k significances
10. n_models <- n_models_bak
*/
//
// Make predict with only the last k models
//
std::unique_ptr<Classifier> model;
std::vector<std::unique_ptr<Classifier>> models_bak;
// 1. n_models_bak <- n_models 2. significances_bak <- significances
auto significance_bak = significanceModels;
auto n_models_bak = n_models;
// 3. significances = vector(k, 1)
significanceModels = std::vector<double>(k, 1.0);
// 4. Move first n classifiers to models_bak
// backup the first n_models - k models (if n_models == k, don't backup any)
for (int i = 0; i < n_models - k; ++i) {
model = std::move(models[0]);
models.erase(models.begin());
models_bak.push_back(std::move(model));
}
assert(models.size() == k);
// 5. n_models <- k
n_models = k;
// 6. Make prediction, compute alpha, update weights
auto ypred = predict(X_train);
//
// Update weights
//
double alpha_t;
bool terminate;
std::tie(weights, alpha_t, terminate) = update_weights(y_train, ypred, weights);
//
// Restore the models if needed
//
// 7. Insert classifiers in models_bak to be the first n models
// if n_models_bak == k, don't restore any, because none of them were moved
if (k != n_models_bak) {
// Insert in the same order as they were extracted
int bak_size = models_bak.size();
for (int i = 0; i < bak_size; ++i) {
model = std::move(models_bak[bak_size - 1 - i]);
models_bak.erase(models_bak.end() - 1);
models.insert(models.begin(), std::move(model));
}
}
// 8. significances <- significances_bak
significanceModels = significance_bak;
//
// Update the significance of the last k models
//
// 9. Update last k significances
for (int i = 0; i < k; ++i) {
significanceModels[n_models_bak - k + i] = alpha_t;
}
// 10. n_models <- n_models_bak
n_models = n_models_bak;
return { weights, alpha_t, terminate };
}
}