Solve the mistake of min and max distance

The split criteria functions min and max distance return classes while
max_samples return distances positives and negatives to hyperplane of
the class with more samples in node
This commit is contained in:
2020-06-17 00:13:52 +02:00
parent 3e52a4746c
commit ecd0b86f4d
3 changed files with 171 additions and 53 deletions

View File

@@ -1,8 +1,10 @@
import os
import unittest
import warnings
import numpy as np
from sklearn.datasets import load_iris
from sklearn.datasets import load_iris, load_wine
from sklearn.exceptions import ConvergenceWarning
from stree import Stree, Snode
from .utils import load_dataset
@@ -59,8 +61,6 @@ class Stree_test(unittest.TestCase):
def test_build_tree(self):
"""Check if the tree is built the same way as predictions of models
"""
import warnings
warnings.filterwarnings("ignore")
for kernel in self._kernels:
clf = Stree(kernel=kernel, random_state=self._random_state)
@@ -102,22 +102,6 @@ class Stree_test(unittest.TestCase):
yp = clf.fit(X, y).predict(X[:num, :])
self.assertListEqual(y[:num].tolist(), yp.tolist())
def test_score(self):
X, y = load_dataset(self._random_state)
accuracies = [
0.9506666666666667,
0.9606666666666667,
0.9433333333333334,
]
for kernel, accuracy_expected in zip(self._kernels, accuracies):
clf = Stree(random_state=self._random_state, kernel=kernel,)
clf.fit(X, y)
accuracy_score = clf.score(X, y)
yp = clf.predict(X)
accuracy_computed = np.mean(yp == y)
self.assertEqual(accuracy_score, accuracy_computed)
self.assertAlmostEqual(accuracy_expected, accuracy_score)
def test_single_vs_multiple_prediction(self):
"""Check if predicting sample by sample gives the same result as
predicting all samples at once
@@ -164,9 +148,6 @@ class Stree_test(unittest.TestCase):
@staticmethod
def test_is_a_sklearn_classifier():
import warnings
from sklearn.exceptions import ConvergenceWarning
warnings.filterwarnings("ignore", category=ConvergenceWarning)
warnings.filterwarnings("ignore", category=RuntimeWarning)
from sklearn.utils.estimator_checks import check_estimator
@@ -328,12 +309,98 @@ class Stree_test(unittest.TestCase):
with self.assertRaises(ValueError):
clf.predict(X[:, :3])
# Tests of score
def test_score_binary(self):
X, y = load_dataset(self._random_state)
accuracies = [
0.9506666666666667,
0.9606666666666667,
0.9433333333333334,
]
for kernel, accuracy_expected in zip(self._kernels, accuracies):
clf = Stree(random_state=self._random_state, kernel=kernel,)
clf.fit(X, y)
accuracy_score = clf.score(X, y)
yp = clf.predict(X)
accuracy_computed = np.mean(yp == y)
self.assertEqual(accuracy_score, accuracy_computed)
self.assertAlmostEqual(accuracy_expected, accuracy_score)
def test_score_max_features(self):
X, y = load_dataset(self._random_state)
clf = Stree(random_state=self._random_state, max_features=2)
clf.fit(X, y)
self.assertAlmostEqual(0.9426666666666667, clf.score(X, y))
def test_score_multi_class(self):
warnings.filterwarnings("ignore")
accuracies = [
0.8258427, # Wine linear min_distance
0.6741573, # Wine linear max_distance
0.8314607, # Wine linear max_samples
0.6629213, # Wine rbf min_distance
1.0000000, # Wine rbf max_distance
0.4044944, # Wine rbf max_samples
0.9157303, # Wine poly min_distance
1.0000000, # Wine poly max_distance
0.7640449, # Wine poly max_samples
0.9933333, # Iris linear min_distance
0.9666667, # Iris linear max_distance
0.9666667, # Iris linear max_samples
0.9800000, # Iris rbf min_distance
0.9800000, # Iris rbf max_distance
0.9800000, # Iris rbf max_samples
1.0000000, # Iris poly min_distance
1.0000000, # Iris poly max_distance
1.0000000, # Iris poly max_samples
0.8993333, # Synthetic linear min_distance
0.6533333, # Synthetic linear max_distance
0.9313333, # Synthetic linear max_samples
0.8320000, # Synthetic rbf min_distance
0.6660000, # Synthetic rbf max_distance
0.8320000, # Synthetic rbf max_samples
0.6066667, # Synthetic poly min_distance
0.6840000, # Synthetic poly max_distance
0.6340000, # Synthetic poly max_samples
]
datasets = [
("Wine", load_wine(return_X_y=True)),
("Iris", load_iris(return_X_y=True)),
(
"Synthetic",
load_dataset(self._random_state, n_classes=3, n_features=5),
),
]
for dataset_name, dataset in datasets:
X, y = dataset
for kernel in self._kernels:
for criteria in [
"min_distance",
"max_distance",
"max_samples",
]:
clf = Stree(
C=17,
random_state=self._random_state,
kernel=kernel,
split_criteria=criteria,
degree=5,
gamma="auto",
)
clf.fit(X, y)
accuracy_score = clf.score(X, y)
yp = clf.predict(X)
accuracy_computed = np.mean(yp == y)
# print(
# "{:.7f}, # {:7} {:5} {}".format(
# accuracy_score, dataset_name, kernel, criteria
# )
# )
accuracy_expected = accuracies.pop(0)
self.assertEqual(accuracy_score, accuracy_computed)
self.assertAlmostEqual(accuracy_expected, accuracy_score)
def test_bogus_splitter_parameter(self):
clf = Stree(splitter="duck")
with self.assertRaises(ValueError):