First AODENew implementation working

This commit is contained in:
2023-03-30 12:20:56 +02:00
parent 80b1ab3699
commit 3af05c9511

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@@ -539,37 +539,68 @@ class KDBNew(KDB):
class SpodeNew(BayesBase):
"""This class implements a classifier for the SPODE algorithm similar to TANNew and KDBNew"""
def __init__(self, random_state, show_progress, structure):
def __init__(
self,
random_state,
show_progress,
discretizer_depth=1e6,
discretizer_length=3,
discretizer_cuts=0,
):
super().__init__(
random_state=random_state, show_progress=show_progress
)
self.structure = structure
self.discretizer_depth = discretizer_depth
self.discretizer_length = discretizer_length
self.discretizer_cuts = discretizer_cuts
def _check_params(self, X, y, kwargs):
expected_args = ["class_name", "features", "state_names"]
return self._check_params_fit(X, y, expected_args, kwargs)
def _build(self):
...
class AODENew:
def __init__(self, show_progress=False, random_state=None):
self.show_progress = show_progress
self.random_state = random_state
class AODENew(AODE):
def __init__(
self,
random_state=None,
show_progress=False,
discretizer_depth=1e6,
discretizer_length=3,
discretizer_cuts=0,
):
self.discretizer_depth = discretizer_depth
self.discretizer_length = discretizer_length
self.discretizer_cuts = discretizer_cuts
super().__init__(
show_progress=show_progress, random_state=random_state
)
def _train(self, kwargs):
self.estimators_ = []
states = dict(state_names=kwargs.pop("state_names", []))
kwargs["states"] = states
for spode in build_spodes(self.feature_names_in_, self.class_name_):
model = SpodeNew(self.random_state, self.show_progress, spode)
self.models_ = []
for model in build_spodes(self.feature_names_in_, self.class_name_):
spode = SpodeNew(
random_state=self.random_state,
show_progress=self.show_progress,
discretizer_cuts=self.discretizer_cuts,
discretizer_depth=self.discretizer_depth,
discretizer_length=self.discretizer_length,
)
spode.dag_ = model
estimator = Proposal(spode)
self.estimators_.append(estimator.fit(self.X_, self.y_, **kwargs))
return self
self.models_.append(estimator.fit(self.X_, self.y_, **kwargs))
def predict(self, X: np.ndarray) -> np.ndarray:
check_is_fitted(self, ["X_", "y_", "fitted_"])
# Input validation
X = check_array(X)
n_samples = X.shape[0]
n_estimators = len(self.estimators_)
n_estimators = len(self.models_)
result = np.empty((n_samples, n_estimators))
for index, model in enumerate(self.estimators_):
result[:, index] = model.predict(X).values.ravel()
for index, model in enumerate(self.models_):
result[:, index] = model.predict(X)
return mode(result, axis=1, keepdims=False).mode.ravel()
@property
@@ -584,6 +615,18 @@ class AODENew:
) / len(self.models_)
return 0
@property
def depth_(self):
return self.states_
def nodes_edges(self):
nodes = 0
edges = 0
if hasattr(self, "fitted_"):
nodes = sum([len(x.estimator.dag_) for x in self.models_])
edges = sum([len(x.estimator.dag_.edges()) for x in self.models_])
return nodes, edges
class Proposal:
def __init__(self, estimator):
@@ -593,7 +636,6 @@ class Proposal:
def fit(self, X, y, **kwargs):
# Check parameters
self.estimator._check_params(X, y, kwargs)
# Discretize train data
self.discretizer = FImdlp(
n_jobs=1,
@@ -613,9 +655,14 @@ class Proposal:
if upgraded:
kwargs = self.update_kwargs(y, kwargs)
super(self.class_type, self.estimator).fit(self.Xd, y, **kwargs)
self.fitted_ = True
return self
def predict(self, X):
# Check is fit had been called
check_is_fitted(self, ["fitted_"])
# Input validation
X = check_array(X)
Xd = self.discretizer.transform(X)
self.check_integrity("predict", Xd)
return super(self.class_type, self.estimator).predict(Xd)